RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 ZNF727A8MUV8 499 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 IGLV2-8P01709 118 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 SFTA3P0C7M3 94 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 GNG4P50150 75 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 CEBPGP53567 150 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 ZNF674Q2M3X9 581 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 CENPWQ5EE01 88 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 SMIM7Q9BQ49 75 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 LINC00467Q9BRT7 94 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 TP53TG3Q9ULZ0 132 aa11.78□□□□□ -0.52
CXCL1-201ENST00000395761 PLECQ15149 4684 aaKnown RBP11.77□□□□□ -0.52
CXCL1-201ENST00000395761 IGHV1OR15-1A0A075B7D0 117 aa11.77□□□□□ -0.53
CXCL1-201ENST00000395761 SMUG1Q53HV7 270 aa11.77□□□□□ -0.53
CXCL1-201ENST00000395761 Q6AWC8 147 aa11.77□□□□□ -0.53
CXCL1-201ENST00000395761 C8orf49Q96NF6 230 aa11.77□□□□□ -0.53
CXCL1-201ENST00000395761 NOP10Q9NPE3 64 aaKnown RBP11.77□□□□□ -0.53
CXCL1-201ENST00000395761 TRAV10A0A0B4J240 114 aa11.76□□□□□ -0.53
CXCL1-201ENST00000395761 TEX48A0A1B0GUV7 120 aa11.76□□□□□ -0.53
CXCL1-201ENST00000395761 CBY3A6NI87 242 aa11.76□□□□□ -0.53
CXCL1-201ENST00000395761 LYRM9A8MSI8 78 aa11.76□□□□□ -0.53
CXCL1-201ENST00000395761 TMEM241Q24JQ0 296 aa11.76□□□□□ -0.53
CXCL1-201ENST00000395761 MUC21Q5SSG8 566 aa11.76□□□□□ -0.53
CXCL1-201ENST00000395761 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
CXCL1-201ENST00000395761 GSN-AS1Q9NRJ2 163 aa11.76□□□□□ -0.53
CXCL1-201ENST00000395761 KLK5Q9Y337 293 aaPredicted RBP11.76□□□□□ -0.53
CXCL1-201ENST00000395761 TIMM8BQ9Y5J9 83 aaPredicted RBP11.76□□□□□ -0.53
CXCL1-201ENST00000395761 DEFB131BA0A096LNP1 70 aa11.75□□□□□ -0.53
CXCL1-201ENST00000395761 DEFB130BP0DP73 79 aa11.75□□□□□ -0.53
CXCL1-201ENST00000395761 DEFB130AP0DP74 79 aa11.75□□□□□ -0.53
CXCL1-201ENST00000395761 ZNF80P51504 273 aaPredicted RBP11.75□□□□□ -0.53
CXCL1-201ENST00000395761 DAD1P61803 113 aa11.75□□□□□ -0.53
CXCL1-201ENST00000395761 ANXA2RQ3ZCQ2 193 aa11.75□□□□□ -0.53
CXCL1-201ENST00000395761 SLC7A5P1Q8MH63 180 aa11.75□□□□□ -0.53
CXCL1-201ENST00000395761 C11orf72Q8NBR9 251 aa11.75□□□□□ -0.53
CXCL1-201ENST00000395761 BIN3Q9NQY0 253 aa11.75□□□□□ -0.53
CXCL1-201ENST00000395761 FABP5P3A8MUU1 101 aa11.74□□□□□ -0.53
CXCL1-201ENST00000395761 CRIP1P50238 77 aa11.74□□□□□ -0.53
CXCL1-201ENST00000395761 ZC2HC1AQ96GY0 325 aa11.74□□□□□ -0.53
CXCL1-201ENST00000395761 SEC11CQ9BY50 192 aa11.74□□□□□ -0.53
CXCL1-201ENST00000395761 SDF2L1Q9HCN8 221 aa11.74□□□□□ -0.53
CXCL1-201ENST00000395761 NAT8Q9UHE5 227 aa11.74□□□□□ -0.53
CXCL1-201ENST00000395761 TRAV21A0A0B4J279 112 aa11.73□□□□□ -0.53
CXCL1-201ENST00000395761 SNURFLB1AK76 121 aa11.73□□□□□ -0.53
CXCL1-201ENST00000395761 IGLL5B9A064 214 aa11.73□□□□□ -0.53
CXCL1-201ENST00000395761 GCGP01275 180 aa11.73□□□□□ -0.53
CXCL1-201ENST00000395761 PFN1P07737 140 aaKnown RBP11.73□□□□□ -0.53
CXCL1-201ENST00000395761 HTN3P15516 51 aa11.73□□□□□ -0.53
CXCL1-201ENST00000395761 C10orf91Q5T1B1 145 aa11.73□□□□□ -0.53
CXCL1-201ENST00000395761 NAGKQ9UJ70 344 aa11.73□□□□□ -0.53
CXCL1-201ENST00000395761 PGPEP1LA6NFU8 196 aa11.72□□□□□ -0.53
CXCL1-201ENST00000395761 K7EN84 100 aa11.72□□□□□ -0.53
CXCL1-201ENST00000395761 ADCYAP1P18509 176 aa11.72□□□□□ -0.53
CXCL1-201ENST00000395761 LINC01551Q86U37 167 aa11.72□□□□□ -0.53
CXCL1-201ENST00000395761 NHLRC2Q8NBF2 726 aa11.72□□□□□ -0.53
CXCL1-201ENST00000395761 F8W036 122 aa11.71□□□□□ -0.53
CXCL1-201ENST00000395761 GNRH2O43555 120 aa11.71□□□□□ -0.53
CXCL1-201ENST00000395761 RPL23P62829 140 aaKnown RBP11.71□□□□□ -0.53
CXCL1-201ENST00000395761 DAZ2Q13117 558 aaKnown RBP11.71□□□□□ -0.53
CXCL1-201ENST00000395761 FAM162BQ5T6X4 162 aa11.71□□□□□ -0.53
CXCL1-201ENST00000395761 FAM159AQ6UWV7 190 aa11.71□□□□□ -0.53
CXCL1-201ENST00000395761 Q6ZTI0 123 aa11.71□□□□□ -0.53
CXCL1-201ENST00000395761 LINC00612Q8N6U2 182 aa11.71□□□□□ -0.53
CXCL1-201ENST00000395761 LYSTQ99698 3801 aa11.71□□□□□ -0.53
CXCL1-201ENST00000395761 MDFICQ9P1T7 246 aa11.71□□□□□ -0.53
CXCL1-201ENST00000395761 C11orf21Q9P2W6 132 aa11.71□□□□□ -0.53
CXCL1-201ENST00000395761 LCE6AA0A183 80 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 GAGE12BA1L429 117 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 C19orf71A6NCJ1 209 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 KRBOX1C9JBD0 128 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 GAGE7O76087 117 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 GAGE12FP0CL80 117 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 GAGE12GP0CL81 117 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 GAGE12IP0CL82 117 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 MGST1P10620 155 aaKnown RBP11.7□□□□□ -0.54
CXCL1-201ENST00000395761 TCL1AP56279 114 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 PNRC1Q12796 327 aaPredicted RBP11.7□□□□□ -0.54
CXCL1-201ENST00000395761 TDRG1Q3Y452 100 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 IBA57Q5T440 356 aaKnown RBP11.7□□□□□ -0.54
CXCL1-201ENST00000395761 APLNQ9ULZ1 77 aa11.7□□□□□ -0.54
CXCL1-201ENST00000395761 CARHSP1Q9Y2V2 147 aaKnown RBP11.7□□□□□ -0.54
CXCL1-201ENST00000395761 IGHV4-4A0A075B6R2 117 aa11.69□□□□□ -0.54
CXCL1-201ENST00000395761 SH2D1AO60880 128 aa11.69□□□□□ -0.54
CXCL1-201ENST00000395761 OR5I1Q13606 314 aa11.69□□□□□ -0.54
CXCL1-201ENST00000395761 FAM231DQ6ZW35 169 aa11.69□□□□□ -0.54
CXCL1-201ENST00000395761 ISOC2Q96AB3 205 aa11.68□□□□□ -0.54
CXCL1-201ENST00000395761 DAZAP1Q96EP5 407 aaKnown RBP11.68□□□□□ -0.54
CXCL1-201ENST00000395761 SACSQ9NZJ4 4579 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 TRGV1A0A0A0MS02 117 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 IGHV3-16A0A0C4DH30 117 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 SPINK4O60575 86 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 TYMSP04818 313 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 ZNF415Q09FC8 603 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 LINC01559Q495D7 138 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 PRR27Q6MZM9 219 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 NUDT10Q8NFP7 164 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 NUDT11Q96G61 164 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 OSTCQ9NRP0 149 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 ALMS1Q8TCU4 4167 aa11.67□□□□□ -0.54
CXCL1-201ENST00000395761 IGKV3D-20A0A0C4DH25 116 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms