RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 KRTAP9-2Q9BYQ4 174 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 TREM1Q9NP99 234 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 GSN-AS1Q9NRJ2 163 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 NAGKQ9UJ70 344 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 TP53TG3Q9ULZ0 132 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 APLNQ9ULZ1 77 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 PSG8Q9UQ74 426 aa6.55□□□□□ -1.36
HMGN1-202ENST00000380747 ABCA13Q86UQ4 5058 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 DNAH17Q9UFH2 4485 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 DNAH2Q9P225 4427 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 FAM74A7A6NL05 159 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.54□□□□□ -1.36
HMGN1-202ENST00000380747 TCTAP57738 103 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 ANXA2RQ3ZCQ2 193 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 CST9LP1Q5W188 147 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 EIF5AL1Q6IS14 154 aaKnown RBP6.54□□□□□ -1.36
HMGN1-202ENST00000380747 PRNTQ86SH4 94 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 CYB561D1Q8N8Q1 229 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 MBD3L1Q8WWY6 194 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 TVP23CQ96ET8 276 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 DNAH11Q96DT5 4516 aa6.54□□□□□ -1.36
HMGN1-202ENST00000380747 DYNC1H1Q14204 4646 aaKnown RBP6.53□□□□□ -1.36
HMGN1-202ENST00000380747 TRAV34A0A0B4J273 112 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 GAGE12BA1L429 117 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 F5H768 121 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 PEX7O00628 323 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 PAGE4O60829 102 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 GAGE7O76087 117 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 ATP5G1P05496 136 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 GAGE12FP0CL80 117 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 GAGE12GP0CL81 117 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 GAGE12IP0CL82 117 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 ATP5G3P48201 142 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 PPT1P50897 306 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 FLI1Q01543 452 aaPredicted RBP6.53□□□□□ -1.36
HMGN1-202ENST00000380747 Q6AWC8 147 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 FAM159AQ6UWV7 190 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 SLC51BQ86UW2 128 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 C9orf62Q8N4C0 152 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 TMEM75Q8N9X5 138 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 C11orf72Q8NBR9 251 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 LINC00479Q96M42 142 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 C8orf49Q96NF6 230 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 NDUFAF3Q9BU61 184 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 NKX6-2Q9C056 277 aaPredicted RBP6.53□□□□□ -1.36
HMGN1-202ENST00000380747 KLF12Q9Y4X4 402 aa6.53□□□□□ -1.36
HMGN1-202ENST00000380747 TRGV1A0A0A0MS02 117 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 TRAV21A0A0B4J279 112 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 FBLL1A6NHQ2 334 aaKnown RBP6.52□□□□□ -1.37
HMGN1-202ENST00000380747 PAX4O43316 350 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 RAB5CP51148 216 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 ZNF415Q09FC8 603 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 DAZ2Q13117 558 aaKnown RBP6.52□□□□□ -1.37
HMGN1-202ENST00000380747 TMEM183BQ1AE95 376 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 SMUG1Q53HV7 270 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 SAPCD1Q5SSQ6 148 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 TMEM88Q6PEY1 159 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 Q6ZTI0 123 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 TMEM183AQ8IXX5 376 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 HIST1H2BAQ96A08 127 aa6.52□□□□□ -1.37
HMGN1-202ENST00000380747 MRPL16Q9NX20 251 aaKnown RBP6.52□□□□□ -1.37
HMGN1-202ENST00000380747 TRGV11A0A075B6L2 103 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 TRGV2A0A075B6R0 118 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 GCGP01275 180 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 IGLV2-11P01706 119 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 SULT1A2P50226 295 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 ZNF80P51504 273 aaPredicted RBP6.51□□□□□ -1.37
HMGN1-202ENST00000380747 NKX2-5P52952 324 aaPredicted RBP6.51□□□□□ -1.37
HMGN1-202ENST00000380747 TCL1AP56279 114 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 UBE2G1P62253 170 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 IBA57Q5T440 356 aaKnown RBP6.51□□□□□ -1.37
HMGN1-202ENST00000380747 LGALS9CQ6DKI2 356 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 Q86TA4 180 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 LINC00612Q8N6U2 182 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 FAM210BQ96KR6 192 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 ARL2-SNX15V9GYD0 113 aa6.51□□□□□ -1.37
HMGN1-202ENST00000380747 KRTAP9-6A0A140TA67 174 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 TEX46H3BTG2 121 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 GNRH2O43555 120 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 SPINK4O60575 86 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 AKR1C3P42330 323 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 CCL20P78556 96 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 OR5I1Q13606 314 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 KCNS1Q96KK3 526 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 TCEAL7Q9BRU2 100 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 MDFICQ9P1T7 246 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 GNG13Q9P2W3 67 aa6.5□□□□□ -1.37
HMGN1-202ENST00000380747 IGHV3-53P01767 116 aa6.49□□□□□ -1.37
HMGN1-202ENST00000380747 TYMSP04818 313 aa6.49□□□□□ -1.37
HMGN1-202ENST00000380747 PFN1P07737 140 aaKnown RBP6.49□□□□□ -1.37
HMGN1-202ENST00000380747 TDRG1Q3Y452 100 aa6.49□□□□□ -1.37
HMGN1-202ENST00000380747 FMC1Q96HJ9 113 aa6.49□□□□□ -1.37
HMGN1-202ENST00000380747 SDF2L1Q9HCN8 221 aa6.49□□□□□ -1.37
HMGN1-202ENST00000380747 TRAV1-1A0A0B4J248 108 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 IGHV3-16A0A0C4DH30 117 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 A0A0J9YY99 117 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 C9orf118A6NHY6 69 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 NUDT3O95989 172 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 P0DMU3 169 aa6.48□□□□□ -1.37
HMGN1-202ENST00000380747 FAM231AP0DMU4 169 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms