RNA–Protein interactions for RNA: ENST00000380742.8

SMN2-202, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 1,388 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-202ENST00000380742 A0A0J9YWU9 116 aa13.5□□□□□ -0.25
SMN2-202ENST00000380742 PLAC8L1A1L4L8 177 aa13.5□□□□□ -0.25
SMN2-202ENST00000380742 GNRH2O43555 120 aa13.5□□□□□ -0.25
SMN2-202ENST00000380742 TMEM263Q8WUH6 116 aaKnown RBP13.5□□□□□ -0.25
SMN2-202ENST00000380742 LY96Q9Y6Y9 160 aa13.5□□□□□ -0.25
SMN2-202ENST00000380742 TMEM241Q24JQ0 296 aa13.49□□□□□ -0.25
SMN2-202ENST00000380742 LINC01551Q86U37 167 aa13.49□□□□□ -0.25
SMN2-202ENST00000380742 C16orf74Q96GX8 76 aa13.49□□□□□ -0.25
SMN2-202ENST00000380742 KCNS1Q96KK3 526 aa13.49□□□□□ -0.25
SMN2-202ENST00000380742 C11orf68Q9H3H3 251 aaKnown RBP13.49□□□□□ -0.25
SMN2-202ENST00000380742 C19orf71A6NCJ1 209 aa13.48□□□□□ -0.25
SMN2-202ENST00000380742 M0R036 132 aa13.48□□□□□ -0.25
SMN2-202ENST00000380742 ORM1P02763 201 aa13.48□□□□□ -0.25
SMN2-202ENST00000380742 TYMSP04818 313 aa13.48□□□□□ -0.25
SMN2-202ENST00000380742 ZNF493Q6ZR52 646 aa13.48□□□□□ -0.25
SMN2-202ENST00000380742 ZNF575Q86XF7 245 aa13.48□□□□□ -0.25
SMN2-202ENST00000380742 C11orf72Q8NBR9 251 aa13.48□□□□□ -0.25
SMN2-202ENST00000380742 NAT8Q9UHE5 227 aa13.48□□□□□ -0.25
SMN2-202ENST00000380742 KRBOX1C9JBD0 128 aa13.47□□□□□ -0.25
SMN2-202ENST00000380742 EMP1P54849 157 aa13.47□□□□□ -0.25
SMN2-202ENST00000380742 LINC01559Q495D7 138 aa13.47□□□□□ -0.25
SMN2-202ENST00000380742 SDF2L1Q9HCN8 221 aa13.47□□□□□ -0.25
SMN2-202ENST00000380742 BIN3Q9NQY0 253 aa13.47□□□□□ -0.25
SMN2-202ENST00000380742 MDFICQ9P1T7 246 aa13.47□□□□□ -0.25
SMN2-202ENST00000380742 TMEM218A2RU14 115 aa13.46□□□□□ -0.25
SMN2-202ENST00000380742 B4DEV8 164 aa13.46□□□□□ -0.25
SMN2-202ENST00000380742 RPL23P62829 140 aaKnown RBP13.46□□□□□ -0.25
SMN2-202ENST00000380742 RPL19P84098 196 aaKnown RBP13.46□□□□□ -0.25
SMN2-202ENST00000380742 EDA2RQ9HAV5 297 aa13.46□□□□□ -0.25
SMN2-202ENST00000380742 GSN-AS1Q9NRJ2 163 aa13.46□□□□□ -0.25
SMN2-202ENST00000380742 TRGV11A0A075B6L2 103 aa13.45□□□□□ -0.26
SMN2-202ENST00000380742 TMSB15BA0A087X1C1 80 aa13.45□□□□□ -0.26
SMN2-202ENST00000380742 IGHV3-16A0A0C4DH30 117 aa13.45□□□□□ -0.26
SMN2-202ENST00000380742 TMEM189A5PLL7 270 aa13.45□□□□□ -0.26
SMN2-202ENST00000380742 IBA57Q5T440 356 aaKnown RBP13.45□□□□□ -0.26
SMN2-202ENST00000380742 NUDT10Q8NFP7 164 aa13.45□□□□□ -0.26
SMN2-202ENST00000380742 DAZAP1Q96EP5 407 aaKnown RBP13.45□□□□□ -0.26
SMN2-202ENST00000380742 NUDT11Q96G61 164 aa13.45□□□□□ -0.26
SMN2-202ENST00000380742 RNASE7Q9H1E1 156 aaKnown RBP13.45□□□□□ -0.26
SMN2-202ENST00000380742 ADCYAP1P18509 176 aa13.45□□□□□ -0.26
SMN2-202ENST00000380742 IL17DQ8TAD2 202 aa13.45□□□□□ -0.26
SMN2-202ENST00000380742 CELA1Q9UNI1 258 aa13.45□□□□□ -0.26
SMN2-202ENST00000380742 GRIFINA4D1Z8 144 aa13.44□□□□□ -0.26
SMN2-202ENST00000380742 SNURFLB1AK76 121 aa13.44□□□□□ -0.26
SMN2-202ENST00000380742 TCL1AP56279 114 aa13.44□□□□□ -0.26
SMN2-202ENST00000380742 ZNF415Q09FC8 603 aa13.44□□□□□ -0.26
SMN2-202ENST00000380742 ADIRFQ15847 76 aa13.44□□□□□ -0.26
SMN2-202ENST00000380742 DKK2Q9UBU2 259 aa13.44□□□□□ -0.26
SMN2-202ENST00000380742 MUC4Q99102 2169 aa13.43□□□□□ -0.26
SMN2-202ENST00000380742 STAB2Q8WWQ8 2551 aa13.43□□□□□ -0.26
SMN2-202ENST00000380742 P01737 135 aa13.43□□□□□ -0.26
SMN2-202ENST00000380742 FAM222AQ5U5X8 452 aa13.43□□□□□ -0.26
SMN2-202ENST00000380742 FAM231DQ6ZW35 169 aa13.43□□□□□ -0.26
SMN2-202ENST00000380742 ISOC2Q96AB3 205 aa13.43□□□□□ -0.26
SMN2-202ENST00000380742 NOP10Q9NPE3 64 aaKnown RBP13.43□□□□□ -0.26
SMN2-202ENST00000380742 TIMM8BQ9Y5J9 83 aaPredicted RBP13.43□□□□□ -0.26
SMN2-202ENST00000380742 RNASE3P12724 160 aaKnown RBP13.42□□□□□ -0.26
SMN2-202ENST00000380742 DNLZQ5SXM8 178 aa13.42□□□□□ -0.26
SMN2-202ENST00000380742 OR2D3Q8NGH3 330 aa13.42□□□□□ -0.26
SMN2-202ENST00000380742 DNAH7Q8WXX0 4024 aa13.41□□□□□ -0.26
SMN2-202ENST00000380742 F8W036 122 aa13.41□□□□□ -0.26
SMN2-202ENST00000380742 ASIPP42127 132 aa13.41□□□□□ -0.26
SMN2-202ENST00000380742 ERVFC1-1P60608 527 aa13.41□□□□□ -0.26
SMN2-202ENST00000380742 DAZ2Q13117 558 aaKnown RBP13.41□□□□□ -0.26
SMN2-202ENST00000380742 SLC7A5P1Q8MH63 180 aa13.41□□□□□ -0.26
SMN2-202ENST00000380742 CXCL1P09341 107 aa13.4□□□□□ -0.26
SMN2-202ENST00000380742 SPART-AS1P0CW21 52 aa13.4□□□□□ -0.26
SMN2-202ENST00000380742 C9orf85Q96MD7 179 aa13.4□□□□□ -0.26
SMN2-202ENST00000380742 SEC11CQ9BY50 192 aa13.4□□□□□ -0.26
SMN2-202ENST00000380742 RPP21Q9H633 154 aaKnown RBP13.4□□□□□ -0.26
SMN2-202ENST00000380742 CXorf65A6NEN9 183 aa13.39□□□□□ -0.27
SMN2-202ENST00000380742 LYRM9A8MSI8 78 aa13.39□□□□□ -0.27
SMN2-202ENST00000380742 H3BVH4 76 aa13.39□□□□□ -0.27
SMN2-202ENST00000380742 GATCO43716 136 aaKnown RBP13.39□□□□□ -0.27
SMN2-202ENST00000380742 GZMBP10144 247 aa13.39□□□□□ -0.27
SMN2-202ENST00000380742 S100A4P26447 101 aaKnown RBP13.39□□□□□ -0.27
SMN2-202ENST00000380742 SPXQ9BT56 116 aa13.39□□□□□ -0.27
SMN2-202ENST00000380742 OSTCQ9NRP0 149 aa13.39□□□□□ -0.27
SMN2-202ENST00000380742 SPINK4O60575 86 aa13.38□□□□□ -0.27
SMN2-202ENST00000380742 ARMS2P0C7Q2 107 aa13.38□□□□□ -0.27
SMN2-202ENST00000380742 C10orf91Q5T1B1 145 aa13.38□□□□□ -0.27
SMN2-202ENST00000380742 Q6ZTI0 123 aa13.38□□□□□ -0.27
SMN2-202ENST00000380742 C11orf45Q8TAV5 145 aa13.38□□□□□ -0.27
SMN2-202ENST00000380742 SFRP2Q96HF1 295 aa13.38□□□□□ -0.27
SMN2-202ENST00000380742 IL36BQ9NZH7 164 aa13.38□□□□□ -0.27
SMN2-202ENST00000380742 NANOS2P60321 138 aaKnown RBP13.37□□□□□ -0.27
SMN2-202ENST00000380742 RPS20P60866 119 aaKnown RBP13.37□□□□□ -0.27
SMN2-202ENST00000380742 C12orf74Q32Q52 190 aa13.37□□□□□ -0.27
SMN2-202ENST00000380742 LINC00612Q8N6U2 182 aa13.37□□□□□ -0.27
SMN2-202ENST00000380742 MRPL16Q9NX20 251 aaKnown RBP13.37□□□□□ -0.27
SMN2-202ENST00000380742 TRGV1A0A0A0MS02 117 aa13.36□□□□□ -0.27
SMN2-202ENST00000380742 PNRC1Q12796 327 aaPredicted RBP13.36□□□□□ -0.27
SMN2-202ENST00000380742 C15orf54Q8N8G6 183 aa13.36□□□□□ -0.27
SMN2-202ENST00000380742 SCRT2Q9NQ03 307 aa13.36□□□□□ -0.27
SMN2-202ENST00000380742 TEX48A0A1B0GUV7 120 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 GAGE12BA1L429 117 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 M0R2P5 195 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 GAGE7O76087 117 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 IGLC6P0CF74 106 aa13.35□□□□□ -0.27
SMN2-202ENST00000380742 GAGE12FP0CL80 117 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms