RNA–Protein interactions for RNA: ENST00000380393.7

PTPRA-204, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 1 (best) BASIC

Gene PTPRA, Length 3,636 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-204ENST00000380393 BEX4Q9NWD9 120 aaPredicted RBP7.3□□□□□ -1.24
PTPRA-204ENST00000380393 NSUN5P1Q3KNT7 163 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 ZNF497Q6ZNH5 498 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 ZNF826PQ6ZT77 177 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 GNG12Q9UBI6 72 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 WNT9BO14905 357 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 TCRAP04437 139 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 MLANAQ16655 118 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 ATP1A1-AS1Q5TC04 95 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 WFDC11Q8NEX6 87 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 IL17DQ8TAD2 202 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 SCNM1Q9BWG6 230 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 PRDM14Q9GZV8 571 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 TRGV8A0A0C4DH27 118 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 ZNF503-AS2A6NEH8 195 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 PRB4P10163 310 aaPredicted RBP7.29□□□□□ -1.24
PTPRA-204ENST00000380393 PLGLB1Q02325 96 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 Q71RC1 249 aaPredicted RBP7.29□□□□□ -1.24
PTPRA-204ENST00000380393 Q86TA4 180 aa7.29□□□□□ -1.24
PTPRA-204ENST00000380393 PSPNO60542 156 aa7.28□□□□□ -1.24
PTPRA-204ENST00000380393 SHANK2-AS3Q9BTD1 123 aa7.28□□□□□ -1.24
PTPRA-204ENST00000380393 ATOX1O00244 68 aa7.28□□□□□ -1.24
PTPRA-204ENST00000380393 NBL1P41271 181 aa7.28□□□□□ -1.24
PTPRA-204ENST00000380393 LYZL1Q6UWQ5 148 aa7.28□□□□□ -1.24
PTPRA-204ENST00000380393 AGPAT4-IT1Q9H0P7 198 aa7.28□□□□□ -1.24
PTPRA-204ENST00000380393 A0A0U1RRA0 63 aa7.28□□□□□ -1.24
PTPRA-204ENST00000380393 Q8N8P6 123 aa7.28□□□□□ -1.24
PTPRA-204ENST00000380393 METTL26Q96S19 204 aa7.28□□□□□ -1.24
PTPRA-204ENST00000380393 OOEPA6NGQ2 149 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 ZNF134P52741 427 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 TMEM30CPA0ZSE6 113 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 J3QT63 122 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 NBR2O15453 112 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 IGHV3-48P01763 117 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 Q6ZT83 130 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 METRNQ9UJH8 293 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 H7C1H1 209 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 RPL39P5Q59GN2 51 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 MRPL14Q6P1L8 145 aaKnown RBP7.27□□□□□ -1.25
PTPRA-204ENST00000380393 LINC00311Q8N616 119 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 LEAP2Q969E1 77 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 DKK4Q9UBT3 224 aa7.27□□□□□ -1.25
PTPRA-204ENST00000380393 COL27A1Q8IZC6 1860 aaPredicted RBP7.27□□□□□ -1.25
PTPRA-204ENST00000380393 ELANEP08246 267 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 FOXF2Q12947 444 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 LINC00643Q86TS7 51 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 DPH3P1Q9H4G8 78 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 ARFGEF3Q5TH69 2177 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 F8VRH5 84 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 LINC00305Q7Z4B0 112 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 PRR7Q8TB68 274 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 BSNQ9UPA5 3926 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 P0DMU3 169 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 FAM231AP0DMU4 169 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 FAM231CP0DMU5 169 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 Q9H3A6 140 aa7.26□□□□□ -1.25
PTPRA-204ENST00000380393 NBASA2RRP1 2371 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 C15orf61A6NNL5 157 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 LY6LH3BQJ8 138 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 KLHL30-AS1Q8NEE0 82 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 ATRXP46100 2492 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 IGLV3-12A0A075B6K2 115 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 IGHV3-33P01772 117 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 KLRB1Q12918 225 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 PATE2Q6UY27 113 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 GGNQ86UU5 652 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 EEF1AKMT3Q96AZ1 226 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 PLXNB1O43157 2135 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 PCOLCEQ15113 449 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 BRK1Q8WUW1 75 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 ZNF714Q96N38 554 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 S1PR3Q99500 378 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 SPTA1P02549 2419 aa7.25□□□□□ -1.25
PTPRA-204ENST00000380393 COL12A1Q99715 3063 aa7.24□□□□□ -1.25
PTPRA-204ENST00000380393 A0A0G2JNJ9 132 aa7.24□□□□□ -1.25
PTPRA-204ENST00000380393 GAS8-AS1O95177 125 aa7.24□□□□□ -1.25
PTPRA-204ENST00000380393 CDSNQ15517 529 aa7.24□□□□□ -1.25
PTPRA-204ENST00000380393 WDR86Q86TI4 376 aa7.24□□□□□ -1.25
PTPRA-204ENST00000380393 Q9UFV3 132 aa7.24□□□□□ -1.25
PTPRA-204ENST00000380393 SPINT2O43291 252 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 Q0VFX4 171 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 LINC01561Q8N1V8 128 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 LINC01600Q96MT4 127 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 A0A0J9YY99 117 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 H3BT86 120 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 H7C423 109 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 IGHV3-30P01768 117 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 ACYP1P07311 99 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 IGHV3-30-5P0DP03 117 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 WT1P19544 449 aaPredicted RBP7.23□□□□□ -1.25
PTPRA-204ENST00000380393 C6orf226Q5I0X4 101 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 SMCR5Q8TEV8 140 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 TMEM178BH3BS89 294 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 FOLR3P41439 243 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 SPINK14Q6IE38 97 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 NEXN-AS1Q8NBZ9 246 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 OTORQ9NRC9 128 aa7.23□□□□□ -1.25
PTPRA-204ENST00000380393 ZNF785A8K8V0 405 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 NPC2P61916 151 aa7.22□□□□□ -1.25
PTPRA-204ENST00000380393 CD69Q07108 199 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 66.8 ms