RNA–Protein interactions for RNA: ENST00000380358.8

CHD3-203, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2 BASIC

Gene CHD3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-203ENST00000380358 ATP6V0E2Q8NHE4 81 aa9.83□□□□□ -0.84
CHD3-203ENST00000380358 NTN5Q8WTR8 489 aaPredicted RBP9.83□□□□□ -0.84
CHD3-203ENST00000380358 NYNRINQ9P2P1 1898 aaKnown RBP9.83□□□□□ -0.84
CHD3-203ENST00000380358 PRSS46E5RG02 174 aa9.83□□□□□ -0.84
CHD3-203ENST00000380358 NPYP01303 97 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 NDUFS6O75380 124 aaKnown RBP9.82□□□□□ -0.84
CHD3-203ENST00000380358 GATA1P15976 413 aaPredicted RBP9.82□□□□□ -0.84
CHD3-203ENST00000380358 ZC2HC1AQ96GY0 325 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 HIGD2AQ9BW72 106 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 WNK3Q9BYP7 1800 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 IGLV2-18A0A075B6J9 118 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 DLEU1O43261 78 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 C1orf194Q5T5A4 169 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 RPL39LQ96EH5 51 aaKnown RBP9.82□□□□□ -0.84
CHD3-203ENST00000380358 IGHV4-30-2A0A087WSY4 118 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 PRR20EP86478 221 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 PRR20CP86479 221 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 PRR20DP86480 221 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 PRR20BP86481 221 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 PRR20AP86496 221 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 FAM110AQ9BQ89 295 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 LINC01559Q495D7 138 aa9.82□□□□□ -0.84
CHD3-203ENST00000380358 MRPL27Q9P0M9 148 aaKnown RBP9.82□□□□□ -0.84
CHD3-203ENST00000380358 FOXI1Q12951 378 aa9.81□□□□□ -0.84
CHD3-203ENST00000380358 MRPL23Q16540 153 aaKnown RBP9.81□□□□□ -0.84
CHD3-203ENST00000380358 DEFB113Q30KQ7 82 aa9.81□□□□□ -0.84
CHD3-203ENST00000380358 SLC25A29Q8N8R3 303 aa9.81□□□□□ -0.84
CHD3-203ENST00000380358 NCKAP5O14513 1909 aa9.81□□□□□ -0.84
CHD3-203ENST00000380358 MPZP25189 248 aa9.81□□□□□ -0.84
CHD3-203ENST00000380358 SIGLEC8Q9NYZ4 499 aa9.81□□□□□ -0.84
CHD3-203ENST00000380358 NMSQ5H8A3 153 aa9.81□□□□□ -0.84
CHD3-203ENST00000380358 ADAMTS7Q9UKP4 1686 aa9.81□□□□□ -0.84
CHD3-203ENST00000380358 SRSF2Q01130 221 aaKnown RBP9.81□□□□□ -0.84
CHD3-203ENST00000380358 PARP14Q460N5 1801 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 TRBV19A0A075B6N1 114 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 VPREB3Q9UKI3 123 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 HHLA3Q9XRX5 114 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 RBAKDNA6NC62 111 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 ZNF664Q8N3J9 261 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 PRSS33Q8NF86 280 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 FLVCR1-AS1Q8TAF5 88 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 TSC2P49815 1807 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 IGLV3-19P01714 112 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 SPINK6Q6UWN8 80 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 A0A087WZ39 114 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 ZFP2Q6ZN57 461 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 ATP5G1P05496 136 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 TMEM14EPQ6UXP3 125 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 FAM231DQ6ZW35 169 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 ANK1P16157 1881 aa9.8□□□□□ -0.84
CHD3-203ENST00000380358 PRR25Q96S07 402 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 IGLC2P0DOY2 106 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 IGLC3P0DOY3 106 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 BLCAPP62952 87 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 MUSTN1Q8IVN3 82 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 PPDPFLQ8WWR9 84 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 PNRC2Q9NPJ4 139 aaKnown RBP9.79□□□□□ -0.84
CHD3-203ENST00000380358 LYPD3O95274 346 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 SCN4AP35499 1836 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 K7EQD1 137 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 LECT2O14960 151 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 IFI6P09912 130 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 DEFB1P60022 68 aa9.79□□□□□ -0.84
CHD3-203ENST00000380358 LTAP01374 205 aa9.78□□□□□ -0.84
CHD3-203ENST00000380358 UBE2D4Q9Y2X8 147 aa9.78□□□□□ -0.84
CHD3-203ENST00000380358 IGKV2D-26A0A0A0MRZ7 120 aa9.78□□□□□ -0.84
CHD3-203ENST00000380358 VOPP1Q96AW1 172 aa9.78□□□□□ -0.84
CHD3-203ENST00000380358 SND1-IT1Q9HBX3 110 aa9.78□□□□□ -0.84
CHD3-203ENST00000380358 TRPM3Q9HCF6 1732 aaPredicted RBP9.78□□□□□ -0.84
CHD3-203ENST00000380358 LYPD6Q86Y78 171 aa9.77□□□□□ -0.84
CHD3-203ENST00000380358 B9D2Q9BPU9 175 aa9.77□□□□□ -0.84
CHD3-203ENST00000380358 J3QLI3 93 aa9.77□□□□□ -0.84
CHD3-203ENST00000380358 PDE6HQ13956 83 aa9.77□□□□□ -0.84
CHD3-203ENST00000380358 NPSP0C0P6 89 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 MED13Q9UHV7 2174 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 BRK1Q8WUW1 75 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 IGLV3-32A0A0A0MS00 114 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 PSMB8P28062 276 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 CT83Q5H943 113 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 C18orf32Q8TCD1 76 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 HELZP42694 1942 aaKnown RBP9.77□□□□□ -0.85
CHD3-203ENST00000380358 ARHGAP21Q5T5U3 1957 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 C9orf118A6NHY6 69 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 SIRPDQ9H106 197 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 CYTL1Q9NRR1 136 aa9.77□□□□□ -0.85
CHD3-203ENST00000380358 POLR3KQ9Y2Y1 108 aaPredicted RBP9.77□□□□□ -0.85
CHD3-203ENST00000380358 C17orf58Q2M2W7 97 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 NDUFA4L2Q9NRX3 87 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 B5MCH6 92 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 BVES-AS1Q5T3Y7 98 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 FOXI2Q6ZQN5 318 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 SHANK1Q9Y566 2161 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 COLCA2A8K830 154 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 IGKV1-17P01599 117 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 SMAD5-AS1Q9Y6J3 95 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 TMEM61Q8N0U2 210 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 SCXQ7RTU7 201 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 DENND4AQ7Z401 1863 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 WFDC10BQ8IUB3 73 aa9.76□□□□□ -0.85
CHD3-203ENST00000380358 TANC2Q9HCD6 1990 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms