RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 MED9Q9NWA0 146 aa13.32□□□□□ -0.28
SSU72-203ENST00000378725 NAGKQ9UJ70 344 aa13.32□□□□□ -0.28
SSU72-203ENST00000378725 TRGV11A0A075B6L2 103 aa13.31□□□□□ -0.28
SSU72-203ENST00000378725 NUPR2A6NF83 97 aa13.31□□□□□ -0.28
SSU72-203ENST00000378725 DAD1P61803 113 aa13.31□□□□□ -0.28
SSU72-203ENST00000378725 ZNF674Q2M3X9 581 aa13.31□□□□□ -0.28
SSU72-203ENST00000378725 PCNPQ8WW12 178 aaKnown RBP13.31□□□□□ -0.28
SSU72-203ENST00000378725 SDF2L1Q9HCN8 221 aa13.31□□□□□ -0.28
SSU72-203ENST00000378725 MDFICQ9P1T7 246 aa13.31□□□□□ -0.28
SSU72-203ENST00000378725 TRAV10A0A0B4J240 114 aa13.3□□□□□ -0.28
SSU72-203ENST00000378725 TYMSP04818 313 aa13.3□□□□□ -0.28
SSU72-203ENST00000378725 ZNF415Q09FC8 603 aa13.3□□□□□ -0.28
SSU72-203ENST00000378725 FAM162BQ5T6X4 162 aa13.3□□□□□ -0.28
SSU72-203ENST00000378725 IGKV3D-20A0A0C4DH25 116 aa13.29□□□□□ -0.28
SSU72-203ENST00000378725 IGHV3-16A0A0C4DH30 117 aa13.29□□□□□ -0.28
SSU72-203ENST00000378725 TMEM250H0YL14 139 aa13.29□□□□□ -0.28
SSU72-203ENST00000378725 SPINK4O60575 86 aa13.29□□□□□ -0.28
SSU72-203ENST00000378725 DEFB130BP0DP73 79 aa13.29□□□□□ -0.28
SSU72-203ENST00000378725 DEFB130AP0DP74 79 aa13.29□□□□□ -0.28
SSU72-203ENST00000378725 NHLRC2Q8NBF2 726 aa13.29□□□□□ -0.28
SSU72-203ENST00000378725 RAB19A4D1S5 217 aa13.28□□□□□ -0.28
SSU72-203ENST00000378725 SH2D1AO60880 128 aa13.28□□□□□ -0.28
SSU72-203ENST00000378725 LGALS9BQ3B8N2 356 aa13.28□□□□□ -0.28
SSU72-203ENST00000378725 TOR2AQ5JU69 321 aa13.28□□□□□ -0.28
SSU72-203ENST00000378725 SMIM12Q96EX1 92 aa13.28□□□□□ -0.28
SSU72-203ENST00000378725 SPXQ9BT56 116 aa13.28□□□□□ -0.28
SSU72-203ENST00000378725 EIF5A2Q9GZV4 153 aaKnown RBP13.28□□□□□ -0.28
SSU72-203ENST00000378725 KLK5Q9Y337 293 aaPredicted RBP13.28□□□□□ -0.28
SSU72-203ENST00000378725 DEFB131BA0A096LNP1 70 aa13.27□□□□□ -0.29
SSU72-203ENST00000378725 IGLV2-8P01709 118 aa13.27□□□□□ -0.29
SSU72-203ENST00000378725 CENPWQ5EE01 88 aa13.27□□□□□ -0.29
SSU72-203ENST00000378725 Q6ZTI0 123 aa13.27□□□□□ -0.29
SSU72-203ENST00000378725 ZNF575Q86XF7 245 aa13.27□□□□□ -0.29
SSU72-203ENST00000378725 C18orf15Q96N68 181 aa13.27□□□□□ -0.29
SSU72-203ENST00000378725 TRBV20OR9-2A0A075B6H5 130 aa13.26□□□□□ -0.29
SSU72-203ENST00000378725 KRBOX1C9JBD0 128 aa13.26□□□□□ -0.29
SSU72-203ENST00000378725 GNG4P50150 75 aa13.26□□□□□ -0.29
SSU72-203ENST00000378725 IFITM2Q01629 132 aa13.26□□□□□ -0.29
SSU72-203ENST00000378725 CSMD3Q7Z407 3707 aa13.25□□□□□ -0.29
SSU72-203ENST00000378725 GAGE12BA1L429 117 aa13.25□□□□□ -0.29
SSU72-203ENST00000378725 GAGE7O76087 117 aa13.25□□□□□ -0.29
SSU72-203ENST00000378725 ORM1P02763 201 aa13.25□□□□□ -0.29
SSU72-203ENST00000378725 GAGE12FP0CL80 117 aa13.25□□□□□ -0.29
SSU72-203ENST00000378725 GAGE12GP0CL81 117 aa13.25□□□□□ -0.29
SSU72-203ENST00000378725 GAGE12IP0CL82 117 aa13.25□□□□□ -0.29
SSU72-203ENST00000378725 LINC01559Q495D7 138 aa13.25□□□□□ -0.29
SSU72-203ENST00000378725 DNLZQ5SXM8 178 aa13.25□□□□□ -0.29
SSU72-203ENST00000378725 TRGV1A0A0A0MS02 117 aa13.24□□□□□ -0.29
SSU72-203ENST00000378725 B4DEV8 164 aa13.24□□□□□ -0.29
SSU72-203ENST00000378725 C9JCJ5 164 aa13.24□□□□□ -0.29
SSU72-203ENST00000378725 SRP19P09132 144 aaKnown RBP13.24□□□□□ -0.29
SSU72-203ENST00000378725 RASL10AQ92737 203 aa13.24□□□□□ -0.29
SSU72-203ENST00000378725 C9orf85Q96MD7 179 aa13.24□□□□□ -0.29
SSU72-203ENST00000378725 PARLQ9H300 379 aa13.24□□□□□ -0.29
SSU72-203ENST00000378725 ATP5G1P05496 136 aa13.23□□□□□ -0.29
SSU72-203ENST00000378725 RNASE3P12724 160 aaKnown RBP13.23□□□□□ -0.29
SSU72-203ENST00000378725 RAB14P61106 215 aa13.23□□□□□ -0.29
SSU72-203ENST00000378725 M0R2P5 195 aa13.22□□□□□ -0.29
SSU72-203ENST00000378725 PTH2Q96A98 100 aa13.22□□□□□ -0.29
SSU72-203ENST00000378725 FAM210BQ96KR6 192 aa13.22□□□□□ -0.29
SSU72-203ENST00000378725 SMDT1Q9H4I9 107 aa13.22□□□□□ -0.29
SSU72-203ENST00000378725 MRPL16Q9NX20 251 aaKnown RBP13.22□□□□□ -0.29
SSU72-203ENST00000378725 STARD9Q9P2P6 4700 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 PGPEP1LA6NFU8 196 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 IGLL5B9A064 214 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 M0R036 132 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 HTN3P15516 51 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 ASIPP42127 132 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 TCTAP57738 103 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 PEA15Q15121 130 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 PRR27Q6MZM9 219 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 BIN3Q9NQY0 253 aa13.21□□□□□ -0.29
SSU72-203ENST00000378725 TRGV2A0A075B6R0 118 aa13.2□□□□□ -0.3
SSU72-203ENST00000378725 C19orf71A6NCJ1 209 aa13.2□□□□□ -0.3
SSU72-203ENST00000378725 C9JQL5 133 aa13.2□□□□□ -0.3
SSU72-203ENST00000378725 MGST1P10620 155 aaKnown RBP13.2□□□□□ -0.3
SSU72-203ENST00000378725 SRSF3P84103 164 aaKnown RBP13.2□□□□□ -0.3
SSU72-203ENST00000378725 CLLU1Q5K131 121 aa13.2□□□□□ -0.3
SSU72-203ENST00000378725 OCC1Q8TAD7 63 aa13.2□□□□□ -0.3
SSU72-203ENST00000378725 IL36BQ9NZH7 164 aa13.2□□□□□ -0.3
SSU72-203ENST00000378725 APLNQ9ULZ1 77 aa13.2□□□□□ -0.3
SSU72-203ENST00000378725 IGHV4-4A0A075B6R2 117 aa13.19□□□□□ -0.3
SSU72-203ENST00000378725 CXCL1P09341 107 aa13.19□□□□□ -0.3
SSU72-203ENST00000378725 S100A4P26447 101 aaKnown RBP13.19□□□□□ -0.3
SSU72-203ENST00000378725 GRIFINA4D1Z8 144 aa13.18□□□□□ -0.3
SSU72-203ENST00000378725 F5H768 121 aa13.18□□□□□ -0.3
SSU72-203ENST00000378725 CEBPGP53567 150 aa13.18□□□□□ -0.3
SSU72-203ENST00000378725 NDUFAF3Q9BU61 184 aa13.18□□□□□ -0.3
SSU72-203ENST00000378725 LY96Q9Y6Y9 160 aa13.18□□□□□ -0.3
SSU72-203ENST00000378725 TMSB15BA0A087X1C1 80 aa13.17□□□□□ -0.3
SSU72-203ENST00000378725 K7EN84 100 aa13.17□□□□□ -0.3
SSU72-203ENST00000378725 ARMS2P0C7Q2 107 aa13.17□□□□□ -0.3
SSU72-203ENST00000378725 HOXA5P20719 270 aa13.17□□□□□ -0.3
SSU72-203ENST00000378725 RPL19P84098 196 aaKnown RBP13.17□□□□□ -0.3
SSU72-203ENST00000378725 OR5I1Q13606 314 aa13.17□□□□□ -0.3
SSU72-203ENST00000378725 ZNF876PQ49A33 203 aa13.17□□□□□ -0.3
SSU72-203ENST00000378725 PIK3CD-AS1Q5SR53 167 aa13.17□□□□□ -0.3
SSU72-203ENST00000378725 POM121L12Q8N7R1 296 aa13.17□□□□□ -0.3
SSU72-203ENST00000378725 DAZAP1Q96EP5 407 aaKnown RBP13.17□□□□□ -0.3
SSU72-203ENST00000378725 SCRT2Q9NQ03 307 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms