RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 GIPP09681 153 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-204ENST00000377349 STAG3L2P0CL84 134 aa13.13□□□□□ -0.31
CBWD3-204ENST00000377349 STAG3L3P0CL85 134 aa13.13□□□□□ -0.31
CBWD3-204ENST00000377349 GCHFRP30047 84 aa13.13□□□□□ -0.31
CBWD3-204ENST00000377349 CRYBA4P53673 196 aa13.13□□□□□ -0.31
CBWD3-204ENST00000377349 LINC00315P59091 139 aa13.13□□□□□ -0.31
CBWD3-204ENST00000377349 FHL2Q14192 279 aa13.13□□□□□ -0.31
CBWD3-204ENST00000377349 OR2G3Q8NGZ4 309 aa13.13□□□□□ -0.31
CBWD3-204ENST00000377349 PCNPQ8WW12 178 aaKnown RBP13.13□□□□□ -0.31
CBWD3-204ENST00000377349 ZNF479Q96JC4 524 aa13.13□□□□□ -0.31
CBWD3-204ENST00000377349 PSMG3Q9BT73 122 aaPredicted RBP13.13□□□□□ -0.31
CBWD3-204ENST00000377349 K7EQM0 130 aa13.12□□□□□ -0.31
CBWD3-204ENST00000377349 MBP02144 154 aa13.12□□□□□ -0.31
CBWD3-204ENST00000377349 TVP23CQ96ET8 276 aa13.12□□□□□ -0.31
CBWD3-204ENST00000377349 SPXQ9BT56 116 aa13.12□□□□□ -0.31
CBWD3-204ENST00000377349 ACTR3CQ9C0K3 210 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-204ENST00000377349 SDF2L1Q9HCN8 221 aa13.12□□□□□ -0.31
CBWD3-204ENST00000377349 DMBT1Q9UGM3 2413 aaPredicted RBP13.12□□□□□ -0.31
CBWD3-204ENST00000377349 BORCS7-ASMTA0A0B4J1R7 106 aa13.11□□□□□ -0.31
CBWD3-204ENST00000377349 SIVA1O15304 175 aa13.11□□□□□ -0.31
CBWD3-204ENST00000377349 SRIP30626 198 aa13.11□□□□□ -0.31
CBWD3-204ENST00000377349 SLAQ13239 276 aa13.11□□□□□ -0.31
CBWD3-204ENST00000377349 RPL7L1Q6DKI1 246 aaKnown RBP13.11□□□□□ -0.31
CBWD3-204ENST00000377349 OR2T35Q8NGX2 323 aa13.11□□□□□ -0.31
CBWD3-204ENST00000377349 MYCBP2O75592 4640 aa13.1□□□□□ -0.31
CBWD3-204ENST00000377349 CXorf1O96002 111 aa13.1□□□□□ -0.31
CBWD3-204ENST00000377349 TYMSP04818 313 aa13.1□□□□□ -0.31
CBWD3-204ENST00000377349 MRPL23Q16540 153 aaKnown RBP13.1□□□□□ -0.31
CBWD3-204ENST00000377349 PRNTQ86SH4 94 aa13.1□□□□□ -0.31
CBWD3-204ENST00000377349 C5orf17Q8NAS9 161 aa13.1□□□□□ -0.31
CBWD3-204ENST00000377349 OR4C5Q8NGB2 326 aa13.1□□□□□ -0.31
CBWD3-204ENST00000377349 ASB13Q8WXK3 278 aa13.1□□□□□ -0.31
CBWD3-204ENST00000377349 IGHV3-16A0A0C4DH30 117 aa13.09□□□□□ -0.31
CBWD3-204ENST00000377349 C9JCJ5 164 aa13.09□□□□□ -0.31
CBWD3-204ENST00000377349 TCRAP04437 139 aa13.09□□□□□ -0.31
CBWD3-204ENST00000377349 GYPEP15421 78 aa13.09□□□□□ -0.31
CBWD3-204ENST00000377349 SUMO1P63165 101 aaKnown RBP13.09□□□□□ -0.31
CBWD3-204ENST00000377349 SERF2P84101 59 aa13.09□□□□□ -0.31
CBWD3-204ENST00000377349 ZFP69Q49AA0 526 aa13.09□□□□□ -0.31
CBWD3-204ENST00000377349 TMEM167BQ9NRX6 74 aa13.09□□□□□ -0.31
CBWD3-204ENST00000377349 M0R2P5 195 aa13.08□□□□□ -0.32
CBWD3-204ENST00000377349 NEGR1Q7Z3B1 354 aa13.08□□□□□ -0.32
CBWD3-204ENST00000377349 PSG8Q9UQ74 426 aa13.08□□□□□ -0.32
CBWD3-204ENST00000377349 SERTM2A0A1B0GWG4 89 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 RNF222A6NCQ9 220 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 GGTLC3B5MD39 225 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 K7EQD1 137 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 GCGP01275 180 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 UBE2G2P60604 165 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 RGS21Q2M5E4 152 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 TDRG1Q3Y452 100 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 LYPD5Q6UWN5 251 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 ARL6IP6Q8N6S5 226 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 RASL10AQ92737 203 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 KCNS1Q96KK3 526 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 TNFSF18Q9UNG2 199 aa13.07□□□□□ -0.32
CBWD3-204ENST00000377349 TRAV4A0A0B4J268 109 aa13.06□□□□□ -0.32
CBWD3-204ENST00000377349 FUSP35637 526 aaKnown RBP eCLIP13.06□□□□□ -0.32
CBWD3-204ENST00000377349 TMEM75Q8N9X5 138 aa13.06□□□□□ -0.32
CBWD3-204ENST00000377349 NHLRC2Q8NBF2 726 aa13.06□□□□□ -0.32
CBWD3-204ENST00000377349 FLG2Q5D862 2391 aaPredicted RBP13.06□□□□□ -0.32
CBWD3-204ENST00000377349 ARPC5O15511 151 aa13.05□□□□□ -0.32
CBWD3-204ENST00000377349 IFNA7P01567 189 aa13.05□□□□□ -0.32
CBWD3-204ENST00000377349 ZNF80P51504 273 aaPredicted RBP13.05□□□□□ -0.32
CBWD3-204ENST00000377349 FGF8P55075 233 aaPredicted RBP13.05□□□□□ -0.32
CBWD3-204ENST00000377349 FLI1Q01543 452 aaPredicted RBP13.05□□□□□ -0.32
CBWD3-204ENST00000377349 CYB561D1Q8N8Q1 229 aa13.05□□□□□ -0.32
CBWD3-204ENST00000377349 EPDR1Q9UM22 224 aa13.05□□□□□ -0.32
CBWD3-204ENST00000377349 LOC100131303A0A0U1RQF7 123 aa13.05□□□□□ -0.32
CBWD3-204ENST00000377349 AKR1C8PQ5T2L2 129 aa13.05□□□□□ -0.32
CBWD3-204ENST00000377349 TNFRSF18Q9Y5U5 241 aa13.05□□□□□ -0.32
CBWD3-204ENST00000377349 IGHV3-73A0A0B4J1V6 119 aa13.04□□□□□ -0.32
CBWD3-204ENST00000377349 TRAV34A0A0B4J273 112 aa13.04□□□□□ -0.32
CBWD3-204ENST00000377349 TAAR5O14804 337 aa13.04□□□□□ -0.32
CBWD3-204ENST00000377349 ORM1P02763 201 aa13.04□□□□□ -0.32
CBWD3-204ENST00000377349 SMUG1Q53HV7 270 aa13.04□□□□□ -0.32
CBWD3-204ENST00000377349 CTXND1A0A1B0GTU2 59 aa13.03□□□□□ -0.32
CBWD3-204ENST00000377349 SMLR1H3BR10 107 aa13.03□□□□□ -0.32
CBWD3-204ENST00000377349 XGP55808 180 aa13.03□□□□□ -0.32
CBWD3-204ENST00000377349 ZNF726P1Q15940 193 aa13.03□□□□□ -0.32
CBWD3-204ENST00000377349 ZNF876PQ49A33 203 aa13.03□□□□□ -0.32
CBWD3-204ENST00000377349 LINC00479Q96M42 142 aa13.03□□□□□ -0.32
CBWD3-204ENST00000377349 TXNDC17Q9BRA2 123 aa13.03□□□□□ -0.32
CBWD3-204ENST00000377349 C11orf21Q9P2W6 132 aa13.03□□□□□ -0.32
CBWD3-204ENST00000377349 LY96Q9Y6Y9 160 aa13.03□□□□□ -0.32
CBWD3-204ENST00000377349 DNAH8Q96JB1 4490 aa13.02□□□□□ -0.33
CBWD3-204ENST00000377349 PFN1P07737 140 aaKnown RBP13.02□□□□□ -0.33
CBWD3-204ENST00000377349 WFDC10BQ8IUB3 73 aa13.02□□□□□ -0.33
CBWD3-204ENST00000377349 SUN5Q8TC36 379 aa13.02□□□□□ -0.33
CBWD3-204ENST00000377349 FBLL1A6NHQ2 334 aaKnown RBP13.01□□□□□ -0.33
CBWD3-204ENST00000377349 EPM2AB3EWF7 344 aa13.01□□□□□ -0.33
CBWD3-204ENST00000377349 IGLV2-11P01706 119 aa13.01□□□□□ -0.33
CBWD3-204ENST00000377349 PPT1P50897 306 aa13.01□□□□□ -0.33
CBWD3-204ENST00000377349 PGPEP1Q9NXJ5 209 aa13.01□□□□□ -0.33
CBWD3-204ENST00000377349 A0A1W2PRE2 83 aa13□□□□□ -0.33
CBWD3-204ENST00000377349 SRRM2Q9UQ35 2752 aaKnown RBP12.99□□□□□ -0.33
CBWD3-204ENST00000377349 TRAV9-2A0A087WT02 112 aa12.99□□□□□ -0.33
CBWD3-204ENST00000377349 PEX7O00628 323 aa12.99□□□□□ -0.33
CBWD3-204ENST00000377349 DNAH10OSP0CZ25 163 aa12.99□□□□□ -0.33
CBWD3-204ENST00000377349 S100A4P26447 101 aaKnown RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms