RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 ADARB2-AS1A8MUL3 147 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 PRAC2D3DTV9 90 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 RPL35AP18077 110 aaKnown RBP5.12□□□□□ -1.59
SMC1A-202ENST00000375340 AZU1P20160 251 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 LOXL1Q08397 574 aaPredicted RBP5.12□□□□□ -1.59
SMC1A-202ENST00000375340 CFHR3Q02985 330 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 PIEZO2Q9H5I5 2752 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 A0A087WX48 190 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 TRAV8-3A0A0A6YYJ7 113 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 OOSP1A8MZH6 123 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 LINC01545Q5VT33 79 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 PIP4P1Q86T03 277 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 UBE2E2Q96LR5 201 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 PRADC1Q9BSG0 188 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 UBE2E1P51965 193 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 LINC01559Q495D7 138 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 TMEM190Q8WZ59 177 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 YAE1D1Q9NRH1 226 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 TRGV1A0A0A0MS02 117 aa5.12□□□□□ -1.59
SMC1A-202ENST00000375340 LINC01549A6NIU2 74 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 DUSP14O95147 198 aaKnown RBP5.11□□□□□ -1.59
SMC1A-202ENST00000375340 DEFB1P60022 68 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 DEFB125Q8N687 156 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 CEP295Q9C0D2 2601 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 C2orf82Q6UX34 121 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 C8orf31Q8N9H6 132 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 DAZ1Q9NQZ3 744 aaKnown RBP5.11□□□□□ -1.59
SMC1A-202ENST00000375340 PIP4P2Q8N4L2 257 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 C12orf74Q32Q52 190 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 PRSS22Q9GZN4 317 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 MALRD1Q5VYJ5 2156 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 PF4P02776 101 aa5.11□□□□□ -1.59
SMC1A-202ENST00000375340 HTN3P15516 51 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 ZNF625Q96I27 306 aaPredicted RBP5.1□□□□□ -1.59
SMC1A-202ENST00000375340 USMG5Q96IX5 58 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 ZFHX2Q9C0A1 2572 aaPredicted RBP5.1□□□□□ -1.59
SMC1A-202ENST00000375340 PMVKQ15126 192 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 C22orf34Q6ZV56 151 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 PLEKHB2Q96CS7 222 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 SPRY4Q9C004 299 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 PROP1O75360 226 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 IGKV1-17P01599 117 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 ETDBQ3ZM63 59 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 SMIM2Q9BVW6 85 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 NPBQ8NG41 125 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 AGPAT4-IT1Q9H0P7 198 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 COL4A2P08572 1712 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 IGHV1-69DA0A0B4J2H0 117 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 IGHV1-69P01742 117 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 TRAV13-1A0A0B4J241 112 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 WI2-2373I1.2A0A1W2PRP0 233 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 F8W1H4 67 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 FXYD2P54710 66 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 LINC00158P58513 81 aa5.1□□□□□ -1.59
SMC1A-202ENST00000375340 TRPT1Q86TN4 253 aaKnown RBP5.09□□□□□ -1.59
SMC1A-202ENST00000375340 TMEM141Q96I45 108 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.09□□□□□ -1.59
SMC1A-202ENST00000375340 K7ENP7 123 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 SH2D6Q7Z4S9 175 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 I3L3M4 83 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 KAAG1Q9UBP8 84 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 CSPG4Q6UVK1 2322 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 TRGV4A0A0C4DH28 118 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 C19orf71A6NCJ1 209 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 GAGE12HA6NDE8 117 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 SDHAF1A6NFY7 115 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 IGFL2Q6UWQ7 119 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 NDUFS8O00217 210 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 SIVA1O15304 175 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 ZNF415Q09FC8 603 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 C2orf70A6NJV1 201 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 MALP21145 153 aa5.09□□□□□ -1.59
SMC1A-202ENST00000375340 KLHL30-AS1Q8NEE0 82 aa5.09□□□□□ -1.6
SMC1A-202ENST00000375340 IGLV11-55A0A075B6I3 123 aa5.09□□□□□ -1.6
SMC1A-202ENST00000375340 IGHV7-81A0A0B4J1V7 117 aa5.09□□□□□ -1.6
SMC1A-202ENST00000375340 A0A1B0GXF2 115 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 OR11H6Q8NGC7 330 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 C1orf159Q96HA4 380 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 KLF12Q9Y4X4 402 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 MUC6Q6W4X9 2439 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 ZFP36P26651 326 aaKnown RBP5.08□□□□□ -1.6
SMC1A-202ENST00000375340 IGHV7-4-1A0A0J9YVY3 117 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 CTSGP08311 255 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 DEFB131AP59861 70 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 GATD1Q8NB37 220 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 SUMO4Q6EEV6 95 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 CFAP161Q6P656 301 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 Q8N7P7 452 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 MYO18BQ8IUG5 2567 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 RBMY1BA6NDE4 496 aaKnown RBP5.08□□□□□ -1.6
SMC1A-202ENST00000375340 RBMY1EA6NEQ0 496 aaKnown RBP5.08□□□□□ -1.6
SMC1A-202ENST00000375340 IGLL5B9A064 214 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 RBMY1DP0C7P1 496 aaKnown RBP5.08□□□□□ -1.6
SMC1A-202ENST00000375340 RBMY1A1P0DJD3 496 aaKnown RBP5.08□□□□□ -1.6
SMC1A-202ENST00000375340 RBMY1CP0DJD4 496 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 GAGE2BQ13066 116 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 GAGE2EQ4V326 116 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 GAGE2DQ9UEU5 116 aa5.08□□□□□ -1.6
SMC1A-202ENST00000375340 TET2Q6N021 2002 aaPredicted RBP5.08□□□□□ -1.6
SMC1A-202ENST00000375340 H3BMM0 161 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms