RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 STAG3L3P0CL85 134 aa9.65□□□□□ -0.86
UBXN11-207ENST00000374223 PET100P0DJ07 73 aa9.65□□□□□ -0.86
UBXN11-207ENST00000374223 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
UBXN11-207ENST00000374223 PQLC2Q6ZP29 291 aa9.65□□□□□ -0.86
UBXN11-207ENST00000374223 NEGR1Q7Z3B1 354 aa9.65□□□□□ -0.86
UBXN11-207ENST00000374223 IQCF2Q8IXL9 164 aa9.65□□□□□ -0.86
UBXN11-207ENST00000374223 TMED6Q8WW62 240 aa9.65□□□□□ -0.86
UBXN11-207ENST00000374223 LENEPQ9Y5L5 61 aa9.65□□□□□ -0.86
UBXN11-207ENST00000374223 TRGV11A0A075B6L2 103 aa9.64□□□□□ -0.87
UBXN11-207ENST00000374223 IGHV3-73A0A0B4J1V6 119 aa9.64□□□□□ -0.87
UBXN11-207ENST00000374223 GGTLC3B5MD39 225 aa9.64□□□□□ -0.87
UBXN11-207ENST00000374223 GCHFRP30047 84 aa9.64□□□□□ -0.87
UBXN11-207ENST00000374223 CDC34P49427 236 aaPredicted RBP9.64□□□□□ -0.87
UBXN11-207ENST00000374223 ZNF726P1Q15940 193 aa9.64□□□□□ -0.87
UBXN11-207ENST00000374223 CMTM2Q8TAZ6 248 aa9.64□□□□□ -0.87
UBXN11-207ENST00000374223 LINC00479Q96M42 142 aa9.64□□□□□ -0.87
UBXN11-207ENST00000374223 SPXQ9BT56 116 aa9.64□□□□□ -0.87
UBXN11-207ENST00000374223 HERC1Q15751 4861 aa9.64□□□□□ -0.87
UBXN11-207ENST00000374223 TRAV4A0A0B4J268 109 aa9.63□□□□□ -0.87
UBXN11-207ENST00000374223 EPM2AB3EWF7 344 aa9.63□□□□□ -0.87
UBXN11-207ENST00000374223 C9JCJ5 164 aa9.63□□□□□ -0.87
UBXN11-207ENST00000374223 M0R2P5 195 aa9.63□□□□□ -0.87
UBXN11-207ENST00000374223 OR4C5Q8NGB2 326 aa9.63□□□□□ -0.87
UBXN11-207ENST00000374223 SUN5Q8TC36 379 aa9.63□□□□□ -0.87
UBXN11-207ENST00000374223 Q9UF83 564 aa9.63□□□□□ -0.87
UBXN11-207ENST00000374223 TRAV34A0A0B4J273 112 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 TRAV21A0A0B4J279 112 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 RNF222A6NCQ9 220 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 PGPEP1LA6NFU8 196 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 G3V3Q6 166 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 TCRAP04437 139 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 SRIP30626 198 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 KRTAP10-1P60331 282 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 SUMO1P63165 101 aaKnown RBP9.62□□□□□ -0.87
UBXN11-207ENST00000374223 RPL7L1Q6DKI1 246 aaKnown RBP9.62□□□□□ -0.87
UBXN11-207ENST00000374223 Q6ZSN1 163 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 OR2G3Q8NGZ4 309 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 AQP10Q96PS8 301 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 PSG8Q9UQ74 426 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 DNAH8Q96JB1 4490 aa9.62□□□□□ -0.87
UBXN11-207ENST00000374223 GATA1P15976 413 aaPredicted RBP9.61□□□□□ -0.87
UBXN11-207ENST00000374223 XGP55808 180 aa9.61□□□□□ -0.87
UBXN11-207ENST00000374223 SLAQ13239 276 aa9.61□□□□□ -0.87
UBXN11-207ENST00000374223 PRNTQ86SH4 94 aa9.61□□□□□ -0.87
UBXN11-207ENST00000374223 Q8N3U1 123 aa9.61□□□□□ -0.87
UBXN11-207ENST00000374223 MED28Q9H204 178 aa9.61□□□□□ -0.87
UBXN11-207ENST00000374223 A0A087WTM6 91 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 GCGP01275 180 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 RNASE3P12724 160 aaKnown RBP9.6□□□□□ -0.87
UBXN11-207ENST00000374223 HAMPP81172 84 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 RGS21Q2M5E4 152 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 CFAP126Q5VTH2 177 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 SLC25A29Q8N8R3 303 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 ASB13Q8WXK3 278 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 SDF2L1Q9HCN8 221 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 EPDR1Q9UM22 224 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 LY96Q9Y6Y9 160 aa9.6□□□□□ -0.87
UBXN11-207ENST00000374223 RS1O15537 224 aa9.59□□□□□ -0.87
UBXN11-207ENST00000374223 FAM74A1Q5RGS3 127 aa9.59□□□□□ -0.87
UBXN11-207ENST00000374223 C5orf17Q8NAS9 161 aa9.59□□□□□ -0.87
UBXN11-207ENST00000374223 C9orf85Q96MD7 179 aa9.59□□□□□ -0.87
UBXN11-207ENST00000374223 PSMG3Q9BT73 122 aaPredicted RBP9.59□□□□□ -0.87
UBXN11-207ENST00000374223 JPT2Q9H910 190 aa9.59□□□□□ -0.87
UBXN11-207ENST00000374223 PGPEP1Q9NXJ5 209 aa9.59□□□□□ -0.87
UBXN11-207ENST00000374223 MSRB1Q9NZV6 116 aa9.59□□□□□ -0.87
UBXN11-207ENST00000374223 VPS13BQ7Z7G8 4022 aa9.59□□□□□ -0.87
UBXN11-207ENST00000374223 INAFM2P0DMQ5 153 aa9.58□□□□□ -0.88
UBXN11-207ENST00000374223 FGF8P55075 233 aaPredicted RBP9.58□□□□□ -0.88
UBXN11-207ENST00000374223 UBE2G2P60604 165 aa9.58□□□□□ -0.88
UBXN11-207ENST00000374223 FLI1Q01543 452 aaPredicted RBP9.58□□□□□ -0.88
UBXN11-207ENST00000374223 ZNF876PQ49A33 203 aa9.58□□□□□ -0.88
UBXN11-207ENST00000374223 ZNF506Q5JVG8 444 aa9.58□□□□□ -0.88
UBXN11-207ENST00000374223 CDPF1Q6NVV7 123 aa9.58□□□□□ -0.88
UBXN11-207ENST00000374223 ARL6IP6Q8N6S5 226 aa9.58□□□□□ -0.88
UBXN11-207ENST00000374223 PCNPQ8WW12 178 aaKnown RBP9.58□□□□□ -0.88
UBXN11-207ENST00000374223 FXYD6-FXYD2A0A087WZ82 144 aa9.57□□□□□ -0.88
UBXN11-207ENST00000374223 IGKV3D-20A0A0C4DH25 116 aa9.57□□□□□ -0.88
UBXN11-207ENST00000374223 EREGO14944 169 aa9.57□□□□□ -0.88
UBXN11-207ENST00000374223 PTTG1O95997 202 aa9.57□□□□□ -0.88
UBXN11-207ENST00000374223 CRYGDP07320 174 aa9.57□□□□□ -0.88
UBXN11-207ENST00000374223 Q6ZNX1 250 aa9.57□□□□□ -0.88
UBXN11-207ENST00000374223 NHLRC2Q8NBF2 726 aa9.57□□□□□ -0.88
UBXN11-207ENST00000374223 FBLL1A6NHQ2 334 aaKnown RBP9.56□□□□□ -0.88
UBXN11-207ENST00000374223 SMLR1H3BR10 107 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 ORM1P02763 201 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 CRIP1P50238 77 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 ERVFC1-1P60608 527 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 KCNS1Q96KK3 526 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 SAMD10Q9BYL1 202 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 ACTR3CQ9C0K3 210 aaPredicted RBP9.56□□□□□ -0.88
UBXN11-207ENST00000374223 TNFSF18Q9UNG2 199 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 CXorf1O96002 111 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 IGHV3-30P01768 117 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 IGHV3-33P01772 117 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 PFN1P07737 140 aaKnown RBP9.56□□□□□ -0.88
UBXN11-207ENST00000374223 GIPP09681 153 aaPredicted RBP9.56□□□□□ -0.88
UBXN11-207ENST00000374223 IGHV3-30-3P0DP02 117 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 IGHV3-30-5P0DP03 117 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 CYB561D1Q8N8Q1 229 aa9.56□□□□□ -0.88
UBXN11-207ENST00000374223 CYTL1Q9NRR1 136 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms