RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 LHBP01229 141 aa11.2□□□□□ -0.62
LMX1B-202ENST00000373474 CR1LQ2VPA4 569 aa11.2□□□□□ -0.62
LMX1B-202ENST00000373474 MED12Q93074 2177 aa11.2□□□□□ -0.62
LMX1B-202ENST00000373474 RS1O15537 224 aa11.2□□□□□ -0.62
LMX1B-202ENST00000373474 CRYGCP07315 174 aa11.2□□□□□ -0.62
LMX1B-202ENST00000373474 FUSP35637 526 aaKnown RBP eCLIP11.19□□□□□ -0.62
LMX1B-202ENST00000373474 FAM120AOSQ5T036 256 aa11.19□□□□□ -0.62
LMX1B-202ENST00000373474 IGFBPL1Q8WX77 278 aa11.19□□□□□ -0.62
LMX1B-202ENST00000373474 UNQ6494/PRO21346Q6UXR6 183 aa11.19□□□□□ -0.62
LMX1B-202ENST00000373474 RNASE8Q8TDE3 154 aaKnown RBP11.19□□□□□ -0.62
LMX1B-202ENST00000373474 C17orf77Q96MU5 243 aa11.19□□□□□ -0.62
LMX1B-202ENST00000373474 COL4A3Q01955 1670 aa11.19□□□□□ -0.62
LMX1B-202ENST00000373474 NDUFS5O43920 106 aa11.19□□□□□ -0.62
LMX1B-202ENST00000373474 SVIPQ8NHG7 77 aa11.18□□□□□ -0.62
LMX1B-202ENST00000373474 RBAKDNA6NC62 111 aa11.18□□□□□ -0.62
LMX1B-202ENST00000373474 G3V4G9 280 aa11.18□□□□□ -0.62
LMX1B-202ENST00000373474 ZNRF2Q8NHG8 242 aa11.18□□□□□ -0.62
LMX1B-202ENST00000373474 HIGD1BQ9P298 99 aa11.18□□□□□ -0.62
LMX1B-202ENST00000373474 AHCTF1Q8WYP5 2266 aa11.18□□□□□ -0.62
LMX1B-202ENST00000373474 DEFB130BP0DP73 79 aa11.18□□□□□ -0.62
LMX1B-202ENST00000373474 DEFB130AP0DP74 79 aa11.18□□□□□ -0.62
LMX1B-202ENST00000373474 FOXI1Q12951 378 aa11.18□□□□□ -0.62
LMX1B-202ENST00000373474 HOXB4P17483 251 aaPredicted RBP11.17□□□□□ -0.62
LMX1B-202ENST00000373474 PCP2Q8IVA1 136 aa11.17□□□□□ -0.62
LMX1B-202ENST00000373474 RMI2Q96E14 147 aa11.17□□□□□ -0.62
LMX1B-202ENST00000373474 MRPL53Q96EL3 112 aaKnown RBP11.17□□□□□ -0.62
LMX1B-202ENST00000373474 ICOSQ9Y6W8 199 aa11.17□□□□□ -0.62
LMX1B-202ENST00000373474 ZNF106Q9H2Y7 1883 aaKnown RBP11.17□□□□□ -0.62
LMX1B-202ENST00000373474 SPRNQ5BIV9 151 aa11.17□□□□□ -0.62
LMX1B-202ENST00000373474 IGF2BP2-AS1Q96M15 143 aa11.17□□□□□ -0.62
LMX1B-202ENST00000373474 IGHV7-4-1A0A0J9YVY3 117 aa11.17□□□□□ -0.62
LMX1B-202ENST00000373474 KMT2EQ8IZD2 1858 aa11.17□□□□□ -0.62
LMX1B-202ENST00000373474 LINC01620Q4KN68 170 aa11.16□□□□□ -0.62
LMX1B-202ENST00000373474 SLC25A29Q8N8R3 303 aa11.16□□□□□ -0.62
LMX1B-202ENST00000373474 CTSZQ9UBR2 303 aa11.16□□□□□ -0.62
LMX1B-202ENST00000373474 RP1L1Q8IWN7 2480 aaPredicted RBP11.16□□□□□ -0.62
LMX1B-202ENST00000373474 MRPL55Q7Z7F7 128 aaKnown RBP11.16□□□□□ -0.62
LMX1B-202ENST00000373474 BRK1Q8WUW1 75 aa11.16□□□□□ -0.62
LMX1B-202ENST00000373474 YLPM1P49750 1951 aaKnown RBP11.16□□□□□ -0.62
LMX1B-202ENST00000373474 TRAV12-2A0A075B6T6 113 aa11.15□□□□□ -0.62
LMX1B-202ENST00000373474 H3BUA1 57 aa11.15□□□□□ -0.62
LMX1B-202ENST00000373474 DYNAPQ8N1N2 210 aa11.15□□□□□ -0.62
LMX1B-202ENST00000373474 TRAV26-1A0A087WT03 109 aa11.15□□□□□ -0.62
LMX1B-202ENST00000373474 Q71RC1 249 aaPredicted RBP11.15□□□□□ -0.62
LMX1B-202ENST00000373474 IGHV3-16A0A0C4DH30 117 aa11.15□□□□□ -0.62
LMX1B-202ENST00000373474 XCL2Q9UBD3 114 aa11.15□□□□□ -0.62
LMX1B-202ENST00000373474 CACNA1DQ01668 2161 aa11.15□□□□□ -0.63
LMX1B-202ENST00000373474 NOTCH4Q99466 2003 aa11.15□□□□□ -0.63
LMX1B-202ENST00000373474 GP9P14770 177 aa11.14□□□□□ -0.63
LMX1B-202ENST00000373474 CLPSL1A2RUU4 121 aa11.14□□□□□ -0.63
LMX1B-202ENST00000373474 MAP1BP46821 2468 aaKnown RBP11.14□□□□□ -0.63
LMX1B-202ENST00000373474 RNF223E7ERA6 249 aa11.14□□□□□ -0.63
LMX1B-202ENST00000373474 DAD1P61803 113 aa11.14□□□□□ -0.63
LMX1B-202ENST00000373474 PIP4P1Q86T03 277 aa11.14□□□□□ -0.63
LMX1B-202ENST00000373474 KIAA2026Q5HYC2 2103 aa11.14□□□□□ -0.63
LMX1B-202ENST00000373474 IGKV3D-7A0A0C4DH55 119 aa11.14□□□□□ -0.63
LMX1B-202ENST00000373474 Q9H8V8 135 aa11.14□□□□□ -0.63
LMX1B-202ENST00000373474 KIF26AQ9ULI4 1882 aaPredicted RBP11.14□□□□□ -0.63
LMX1B-202ENST00000373474 JMJD7-PLA2G4BH0Y9G9 81 aa11.13□□□□□ -0.63
LMX1B-202ENST00000373474 H3BT86 120 aa11.13□□□□□ -0.63
LMX1B-202ENST00000373474 NPBQ8NG41 125 aa11.13□□□□□ -0.63
LMX1B-202ENST00000373474 TRBV10-2A0A0K0K1G8 114 aa11.13□□□□□ -0.63
LMX1B-202ENST00000373474 J3QLI3 93 aa11.13□□□□□ -0.63
LMX1B-202ENST00000373474 IGFL2Q6UWQ7 119 aa11.13□□□□□ -0.63
LMX1B-202ENST00000373474 ZFP2Q6ZN57 461 aa11.13□□□□□ -0.63
LMX1B-202ENST00000373474 TPRP12270 2363 aaKnown RBP11.12□□□□□ -0.63
LMX1B-202ENST00000373474 ESPL1Q14674 2120 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 IGHV3-38A0A0C4DH36 116 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 C22orf46C9J442 243 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 I3L2K1 104 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 NUPR1O60356 82 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 IGLV2-14P01704 120 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 MUSTN1Q8IVN3 82 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 TAX1BP3O14907 124 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 WFDC2Q14508 124 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 KIAA1549LQ6ZVL6 1849 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 FER1L5A0AVI2 2057 aa11.12□□□□□ -0.63
LMX1B-202ENST00000373474 RNF114Q9Y508 228 aa11.11□□□□□ -0.63
LMX1B-202ENST00000373474 F5H768 121 aa11.11□□□□□ -0.63
LMX1B-202ENST00000373474 NDUFB1O75438 58 aa11.11□□□□□ -0.63
LMX1B-202ENST00000373474 SP5Q6BEB4 398 aaPredicted RBP11.11□□□□□ -0.63
LMX1B-202ENST00000373474 AGPAT4-IT1Q9H0P7 198 aa11.11□□□□□ -0.63
LMX1B-202ENST00000373474 C11orf1Q9H5F2 150 aa11.11□□□□□ -0.63
LMX1B-202ENST00000373474 LENEPQ9Y5L5 61 aa11.11□□□□□ -0.63
LMX1B-202ENST00000373474 OBSL1O75147 1896 aa11.11□□□□□ -0.63
LMX1B-202ENST00000373474 CFHR3Q02985 330 aa11.11□□□□□ -0.63
LMX1B-202ENST00000373474 PATE2Q6UY27 113 aa11.11□□□□□ -0.63
LMX1B-202ENST00000373474 FOXE3Q13461 319 aa11.1□□□□□ -0.63
LMX1B-202ENST00000373474 PRSS33Q8NF86 280 aa11.1□□□□□ -0.63
LMX1B-202ENST00000373474 VSIG2Q96IQ7 327 aa11.1□□□□□ -0.63
LMX1B-202ENST00000373474 RITA1Q96K30 269 aa11.1□□□□□ -0.63
LMX1B-202ENST00000373474 MRPL23Q16540 153 aaKnown RBP11.1□□□□□ -0.63
LMX1B-202ENST00000373474 NREPQ16612 68 aa11.1□□□□□ -0.63
LMX1B-202ENST00000373474 HEATR1Q9H583 2144 aaKnown RBP11.1□□□□□ -0.63
LMX1B-202ENST00000373474 PKIGQ9Y2B9 76 aa11.1□□□□□ -0.63
LMX1B-202ENST00000373474 FAM186AA6NE01 2351 aa11.1□□□□□ -0.63
LMX1B-202ENST00000373474 ICE1Q9Y2F5 2266 aa11.1□□□□□ -0.63
LMX1B-202ENST00000373474 OPRPNQ99935 248 aaPredicted RBP11.09□□□□□ -0.63
LMX1B-202ENST00000373474 CRYGBP07316 175 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms