RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 FAM231DQ6ZW35 169 aa11.19□□□□□ -0.62
RAPGEF1-202ENST00000372190 PCP2Q8IVA1 136 aa11.19□□□□□ -0.62
RAPGEF1-202ENST00000372190 TRAV23DV6A0A075B6W5 121 aa11.19□□□□□ -0.62
RAPGEF1-202ENST00000372190 SDHAF1A6NFY7 115 aa11.19□□□□□ -0.62
RAPGEF1-202ENST00000372190 UPK3BQ9BT76 320 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 SMIM9A6NGZ8 99 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 MDC1Q14676 2089 aaKnown RBP11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 C5orf63A6NC05 138 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 V9GYV3 84 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 COL6A6A6NMZ7 2263 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 IL15RAQ13261 267 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 PMAIP1Q13794 54 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 GVINP1Q7Z2Y8 2422 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 CENPVL3A0A0U1RRI6 287 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 CDPF1Q6NVV7 123 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 USMG5Q96IX5 58 aa11.18□□□□□ -0.62
RAPGEF1-202ENST00000372190 MT-ATP8P03928 68 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 TRBV7-1A0A0A6YYK4 115 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 COX7B2Q8TF08 81 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 OPRPNQ99935 248 aaPredicted RBP11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 ZNF747Q9BV97 191 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 PLXNA2O75051 1894 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 NOTCH4Q99466 2003 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 NTF4P34130 210 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 HIST2H2BCQ6DN03 193 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 HIST2H2BDQ6DRA6 164 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 H0YJW9 148 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 RPL35AP18077 110 aaKnown RBP11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 MYO7BQ6PIF6 2116 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 IGFL2Q6UWQ7 119 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 PYGO2Q9BRQ0 406 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 FAM223BA6NKX1 122 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 HIGD2BQ4VC39 106 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 RNF144BQ7Z419 303 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 FAM223AQ8IWN6 122 aa11.17□□□□□ -0.62
RAPGEF1-202ENST00000372190 TMEM61Q8N0U2 210 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 FAM110DQ8TAY7 271 aaPredicted RBP11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 Q8TCH9 128 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 HEATR5BQ9P2D3 2071 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 GRNP28799 593 aaKnown RBP11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 LYPD6Q86Y78 171 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 LINC00479Q96M42 142 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 C20orf78Q9BR46 151 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 TEX22C9J3V5 150 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 PDE6GP18545 87 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 ANKRD39Q53RE8 183 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 HIGD1BQ9P298 99 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 ICE1Q9Y2F5 2266 aa11.16□□□□□ -0.62
RAPGEF1-202ENST00000372190 Q6P435 159 aa11.15□□□□□ -0.62
RAPGEF1-202ENST00000372190 A4D1N5 150 aa11.15□□□□□ -0.62
RAPGEF1-202ENST00000372190 C10orf55Q5SWW7 151 aa11.15□□□□□ -0.62
RAPGEF1-202ENST00000372190 Q6ZS49 121 aa11.15□□□□□ -0.62
RAPGEF1-202ENST00000372190 KIF26AQ9ULI4 1882 aaPredicted RBP11.15□□□□□ -0.62
RAPGEF1-202ENST00000372190 ETV2O00321 342 aaPredicted RBP11.15□□□□□ -0.63
RAPGEF1-202ENST00000372190 LTBP2Q14767 1821 aa11.15□□□□□ -0.63
RAPGEF1-202ENST00000372190 HELZP42694 1942 aaKnown RBP11.15□□□□□ -0.63
RAPGEF1-202ENST00000372190 K7EMI3 77 aa11.14□□□□□ -0.63
RAPGEF1-202ENST00000372190 IGLC6P0CF74 106 aa11.14□□□□□ -0.63
RAPGEF1-202ENST00000372190 GPR179Q6PRD1 2367 aa11.14□□□□□ -0.63
RAPGEF1-202ENST00000372190 LGALS9O00182 355 aa11.14□□□□□ -0.63
RAPGEF1-202ENST00000372190 C5orf24Q7Z6I8 188 aa11.14□□□□□ -0.63
RAPGEF1-202ENST00000372190 INTS1Q8N201 2190 aaKnown RBP11.14□□□□□ -0.63
RAPGEF1-202ENST00000372190 CASC2Q6XLA1 102 aa11.14□□□□□ -0.63
RAPGEF1-202ENST00000372190 CLUHP3Q96NS8 147 aa11.14□□□□□ -0.63
RAPGEF1-202ENST00000372190 SMIM26A0A096LP01 95 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 LINC00473A8K010 186 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 C15orf62A8K5M9 175 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 E9PQ18 207 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 FAM110AQ9BQ89 295 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 USP17L23D6RBM5 183 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 Q9H8V8 135 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 GATA4P43694 442 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 ESPL1Q14674 2120 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 HRCT1Q6UXD1 115 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 RHOHQ15669 191 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 PRORYQ9H606 182 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 ZNF581Q9P0T4 197 aa11.13□□□□□ -0.63
RAPGEF1-202ENST00000372190 A0A0G2JRQ6 117 aa11.12□□□□□ -0.63
RAPGEF1-202ENST00000372190 ATP5EP2Q5VTU8 51 aa11.12□□□□□ -0.63
RAPGEF1-202ENST00000372190 LHBP01229 141 aa11.12□□□□□ -0.63
RAPGEF1-202ENST00000372190 TRAV26-2A0A0B4J265 109 aa11.12□□□□□ -0.63
RAPGEF1-202ENST00000372190 LOXL1Q08397 574 aaPredicted RBP11.12□□□□□ -0.63
RAPGEF1-202ENST00000372190 IGLV1-44P01699 117 aa11.12□□□□□ -0.63
RAPGEF1-202ENST00000372190 C8orf49Q96NF6 230 aa11.12□□□□□ -0.63
RAPGEF1-202ENST00000372190 SHANK2-AS3Q9BTD1 123 aa11.12□□□□□ -0.63
RAPGEF1-202ENST00000372190 SIGLEC9Q9Y336 463 aa11.12□□□□□ -0.63
RAPGEF1-202ENST00000372190 FXYD2P54710 66 aa11.11□□□□□ -0.63
RAPGEF1-202ENST00000372190 COA6Q5JTJ3 125 aaKnown RBP11.11□□□□□ -0.63
RAPGEF1-202ENST00000372190 LINC01619G3V211 115 aa11.11□□□□□ -0.63
RAPGEF1-202ENST00000372190 ETDCA0A1B0GVM5 59 aa11.11□□□□□ -0.63
RAPGEF1-202ENST00000372190 SNRNP200O75643 2136 aaKnown RBP11.11□□□□□ -0.63
RAPGEF1-202ENST00000372190 IGKV4-1P06312 121 aa11.11□□□□□ -0.63
RAPGEF1-202ENST00000372190 COL4A4P53420 1690 aaPredicted RBP11.11□□□□□ -0.63
RAPGEF1-202ENST00000372190 DIDO1Q9BTC0 2240 aaKnown RBP11.11□□□□□ -0.63
RAPGEF1-202ENST00000372190 RTTNQ86VV8 2226 aa11.1□□□□□ -0.63
RAPGEF1-202ENST00000372190 ADORA2A-AS1P86434 159 aa11.1□□□□□ -0.63
RAPGEF1-202ENST00000372190 C2orf16Q68DN1 1984 aa11.1□□□□□ -0.63
RAPGEF1-202ENST00000372190 TMEM256-PLSCR3K7ERE1 68 aa11.1□□□□□ -0.63
RAPGEF1-202ENST00000372190 CYYR1Q96J86 154 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms