RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 LINC00477Q96M19 166 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 KLK15Q9H2R5 256 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 DAZ1Q9NQZ3 744 aaKnown RBP10.68□□□□□ -0.7
LDB3-204ENST00000372066 VPREB3Q9UKI3 123 aa10.68□□□□□ -0.7
LDB3-204ENST00000372066 WNK1Q9H4A3 2382 aa10.67□□□□□ -0.7
LDB3-204ENST00000372066 TMSB15BA0A087X1C1 80 aa10.67□□□□□ -0.7
LDB3-204ENST00000372066 TRBV7-9A0A0J9YWB2 115 aa10.67□□□□□ -0.7
LDB3-204ENST00000372066 SOCS3O14543 225 aa10.67□□□□□ -0.7
LDB3-204ENST00000372066 ORM1P02763 201 aa10.67□□□□□ -0.7
LDB3-204ENST00000372066 GPHB5Q86YW7 130 aa10.67□□□□□ -0.7
LDB3-204ENST00000372066 ZNF738Q8NE65 137 aa10.67□□□□□ -0.7
LDB3-204ENST00000372066 TMEM191AQ9H0A3 160 aa10.67□□□□□ -0.7
LDB3-204ENST00000372066 NOTCH1P46531 2555 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 C20orf202A1L168 122 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 IGHV3-11P01762 117 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 CD33P20138 364 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 FOXE3Q13461 319 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 Q6ZS46 218 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 Q6ZSV7 163 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 ORMDL3Q8N138 153 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 OR10J6PQ8NGY7 276 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 UFC1Q9Y3C8 167 aa10.66□□□□□ -0.7
LDB3-204ENST00000372066 IGHV1-24A0A0C4DH33 117 aa10.65□□□□□ -0.7
LDB3-204ENST00000372066 PPBPP02775 128 aa10.65□□□□□ -0.7
LDB3-204ENST00000372066 TMEM70Q9BUB7 260 aa10.65□□□□□ -0.7
LDB3-204ENST00000372066 C16orf95Q9H693 158 aa10.65□□□□□ -0.7
LDB3-204ENST00000372066 C2orf70A6NJV1 201 aa10.65□□□□□ -0.71
LDB3-204ENST00000372066 CRXO43186 299 aaPredicted RBP10.65□□□□□ -0.71
LDB3-204ENST00000372066 ELANEP08246 267 aa10.65□□□□□ -0.71
LDB3-204ENST00000372066 FA2HQ7L5A8 372 aa10.65□□□□□ -0.71
LDB3-204ENST00000372066 AP5S1Q9NUS5 200 aa10.65□□□□□ -0.71
LDB3-204ENST00000372066 SMPXQ9UHP9 88 aa10.65□□□□□ -0.71
LDB3-204ENST00000372066 HSPB8Q9UJY1 196 aa10.65□□□□□ -0.71
LDB3-204ENST00000372066 LAMTOR2Q9Y2Q5 125 aa10.65□□□□□ -0.71
LDB3-204ENST00000372066 PRKDCP78527 4128 aaKnown RBP10.64□□□□□ -0.71
LDB3-204ENST00000372066 TMEM213A2RRL7 107 aa10.64□□□□□ -0.71
LDB3-204ENST00000372066 LEPROTL1O95214 131 aa10.64□□□□□ -0.71
LDB3-204ENST00000372066 PRB4P10163 310 aaPredicted RBP10.64□□□□□ -0.71
LDB3-204ENST00000372066 TWIST1Q15672 202 aa10.64□□□□□ -0.71
LDB3-204ENST00000372066 KLHDC1Q8N7A1 406 aa10.64□□□□□ -0.71
LDB3-204ENST00000372066 PRELID3AQ96N28 172 aa10.64□□□□□ -0.71
LDB3-204ENST00000372066 MIEN1Q9BRT3 115 aa10.64□□□□□ -0.71
LDB3-204ENST00000372066 RHPN1-AS1Q9BWJ2 59 aa10.64□□□□□ -0.71
LDB3-204ENST00000372066 A0A1B0GV90 55 aa10.63□□□□□ -0.71
LDB3-204ENST00000372066 M0R143 59 aa10.63□□□□□ -0.71
LDB3-204ENST00000372066 NUTF2P61970 127 aaKnown RBP10.63□□□□□ -0.71
LDB3-204ENST00000372066 CACNG7P62955 275 aa10.63□□□□□ -0.71
LDB3-204ENST00000372066 EBLN2Q6P2I7 272 aa10.63□□□□□ -0.71
LDB3-204ENST00000372066 PRSS3P2Q8NHM4 247 aa10.63□□□□□ -0.71
LDB3-204ENST00000372066 PAM16Q9Y3D7 125 aa10.63□□□□□ -0.71
LDB3-204ENST00000372066 D6R8Y8 96 aa10.62□□□□□ -0.71
LDB3-204ENST00000372066 ID1P41134 155 aa10.62□□□□□ -0.71
LDB3-204ENST00000372066 MRPL51Q4U2R6 128 aaKnown RBP10.62□□□□□ -0.71
LDB3-204ENST00000372066 ZNF575Q86XF7 245 aa10.62□□□□□ -0.71
LDB3-204ENST00000372066 AMN1Q8IY45 258 aa10.62□□□□□ -0.71
LDB3-204ENST00000372066 MYOZ3Q8TDC0 251 aa10.62□□□□□ -0.71
LDB3-204ENST00000372066 C20orf173Q96LM9 149 aa10.62□□□□□ -0.71
LDB3-204ENST00000372066 IGHV4-4A0A075B6R2 117 aa10.61□□□□□ -0.71
LDB3-204ENST00000372066 TRAV21A0A0B4J279 112 aa10.61□□□□□ -0.71
LDB3-204ENST00000372066 IGKV3D-20A0A0C4DH25 116 aa10.61□□□□□ -0.71
LDB3-204ENST00000372066 SNAI2O43623 268 aa10.61□□□□□ -0.71
LDB3-204ENST00000372066 PET117Q6UWS5 81 aa10.61□□□□□ -0.71
LDB3-204ENST00000372066 SMIM15Q7Z3B0 74 aa10.61□□□□□ -0.71
LDB3-204ENST00000372066 APRG1Q8IVJ8 170 aa10.61□□□□□ -0.71
LDB3-204ENST00000372066 OR10AG1Q8NH19 301 aa10.61□□□□□ -0.71
LDB3-204ENST00000372066 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
LDB3-204ENST00000372066 LGALS9O00182 355 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 LGALS1P09382 135 aaKnown RBP10.6□□□□□ -0.71
LDB3-204ENST00000372066 MED14OSP0DP75 135 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 CKS2P33552 79 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 TMEM95Q3KNT9 176 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 SPATA45Q537H7 98 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 RNF152Q8N8N0 203 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 TRAV9-2A0A087WT02 112 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 SYS1-DBNDD2H3BUS1 97 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 TDRG1Q3Y452 100 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 TM4SF20Q53R12 229 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 LCNL1Q6ZST4 164 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 OR8A1Q8NGG7 326 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 FAM19A4Q96LR4 140 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 ZNF702PQ9H963 129 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 UQCR10Q9UDW1 63 aa10.6□□□□□ -0.71
LDB3-204ENST00000372066 CSN3P07498 182 aa10.59□□□□□ -0.71
LDB3-204ENST00000372066 RPL11P62913 178 aaKnown RBP10.59□□□□□ -0.71
LDB3-204ENST00000372066 Q8N2B8 174 aa10.59□□□□□ -0.71
LDB3-204ENST00000372066 ZFAND2AQ8N6M9 145 aa10.59□□□□□ -0.71
LDB3-204ENST00000372066 UBE2E2Q96LR5 201 aa10.59□□□□□ -0.71
LDB3-204ENST00000372066 SIGLEC8Q9NYZ4 499 aa10.59□□□□□ -0.71
LDB3-204ENST00000372066 ZNF705AQ6ZN79 300 aaPredicted RBP10.58□□□□□ -0.72
LDB3-204ENST00000372066 SPATA12Q7Z6I5 190 aa10.58□□□□□ -0.72
LDB3-204ENST00000372066 RNF185Q96GF1 192 aa10.58□□□□□ -0.72
LDB3-204ENST00000372066 MAP1LC3AQ9H492 121 aa10.58□□□□□ -0.72
LDB3-204ENST00000372066 C11orf21Q9P2W6 132 aa10.58□□□□□ -0.72
LDB3-204ENST00000372066 LINC01546A6NGU7 62 aa10.57□□□□□ -0.72
LDB3-204ENST00000372066 G3V4G9 280 aa10.57□□□□□ -0.72
LDB3-204ENST00000372066 HIST2H2BDQ6DRA6 164 aa10.57□□□□□ -0.72
LDB3-204ENST00000372066 C11orf44Q8N8P7 122 aa10.57□□□□□ -0.72
LDB3-204ENST00000372066 ODF3Q96PU9 254 aa10.57□□□□□ -0.72
LDB3-204ENST00000372066 SNHG12Q9BXW3 62 aa10.57□□□□□ -0.72
LDB3-204ENST00000372066 OR4C46A6NHA9 309 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms