RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 RNF5Q99942 180 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 PRO0628Q9UI54 55 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 ABCA4P78363 2273 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 TRAV41A0A0B4J266 112 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 PATE2Q6UY27 113 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 LINC00643Q86TS7 51 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 SHISA9B4DS77 424 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 TMEM86BQ8N661 226 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 TMEM141Q96I45 108 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 PLXNA2O75051 1894 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 DUSP14O95147 198 aaKnown RBP10.05□□□□□ -0.8
GPC4-201ENST00000370828 ZNF833PQ6ZTB9 187 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 NDUFA12Q9UI09 145 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 ACACAQ13085 2346 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 DYSFO75923 2080 aa10.05□□□□□ -0.8
GPC4-201ENST00000370828 SPRY2O43597 315 aa10.04□□□□□ -0.8
GPC4-201ENST00000370828 FAM167A-AS1Q96KT0 104 aa10.04□□□□□ -0.8
GPC4-201ENST00000370828 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP10.04□□□□□ -0.8
GPC4-201ENST00000370828 K7EM74 188 aa10.04□□□□□ -0.8
GPC4-201ENST00000370828 NTN3O00634 580 aaPredicted RBP10.04□□□□□ -0.8
GPC4-201ENST00000370828 GDF5OSQ5U4N7 250 aa10.04□□□□□ -0.8
GPC4-201ENST00000370828 ZNF295-AS1Q8N0V1 137 aa10.04□□□□□ -0.8
GPC4-201ENST00000370828 EML6Q6ZMW3 1958 aa10.04□□□□□ -0.8
GPC4-201ENST00000370828 DKK1O94907 266 aa10.04□□□□□ -0.8
GPC4-201ENST00000370828 FREM1Q5H8C1 2179 aa10.03□□□□□ -0.8
GPC4-201ENST00000370828 IGLV2-14P01704 120 aa10.03□□□□□ -0.8
GPC4-201ENST00000370828 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
GPC4-201ENST00000370828 hADV29S1A0JD25 119 aa10.03□□□□□ -0.8
GPC4-201ENST00000370828 COL4A6Q14031 1691 aa10.03□□□□□ -0.8
GPC4-201ENST00000370828 LOXL1Q08397 574 aaPredicted RBP10.03□□□□□ -0.8
GPC4-201ENST00000370828 DSCAML1Q8TD84 2053 aa10.03□□□□□ -0.8
GPC4-201ENST00000370828 RIF1Q5UIP0 2472 aaKnown RBP10.03□□□□□ -0.8
GPC4-201ENST00000370828 MALRD1Q5VYJ5 2156 aa10.03□□□□□ -0.8
GPC4-201ENST00000370828 IGKV1OR2-108A0A075B7D4 117 aa10.03□□□□□ -0.8
GPC4-201ENST00000370828 PFN2P35080 140 aa10.02□□□□□ -0.8
GPC4-201ENST00000370828 ZNF493Q6ZR52 646 aa10.02□□□□□ -0.8
GPC4-201ENST00000370828 CR1LQ2VPA4 569 aa10.02□□□□□ -0.81
GPC4-201ENST00000370828 Q6ZSR3 168 aa10.02□□□□□ -0.81
GPC4-201ENST00000370828 VMO1Q7Z5L0 202 aa10.02□□□□□ -0.81
GPC4-201ENST00000370828 NCOA6Q14686 2063 aaPredicted RBP10.02□□□□□ -0.81
GPC4-201ENST00000370828 ALPK3Q96L96 1907 aa10.02□□□□□ -0.81
GPC4-201ENST00000370828 PSMB8P28062 276 aa10.02□□□□□ -0.81
GPC4-201ENST00000370828 COL4A3Q01955 1670 aa10.02□□□□□ -0.81
GPC4-201ENST00000370828 TEX36Q5VZQ5 186 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 MED13Q9UHV7 2174 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 HAMPP81172 84 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 Q6ZPA2 131 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 DENND4CQ5VZ89 1909 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 IGLC6P0CF74 106 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 ZNF672Q499Z4 452 aaPredicted RBP10.01□□□□□ -0.81
GPC4-201ENST00000370828 LINC01620Q4KN68 170 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 ZNF491Q8N8L2 437 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 RHODO00212 210 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 GP9P14770 177 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 C10orf105Q8TEF2 133 aa10.01□□□□□ -0.81
GPC4-201ENST00000370828 CRYGBP07316 175 aa10□□□□□ -0.81
GPC4-201ENST00000370828 TRPT1Q86TN4 253 aaKnown RBP10□□□□□ -0.81
GPC4-201ENST00000370828 PPDPFQ9H3Y8 114 aa10□□□□□ -0.81
GPC4-201ENST00000370828 MALP21145 153 aa10□□□□□ -0.81
GPC4-201ENST00000370828 CFHR4Q92496 578 aa10□□□□□ -0.81
GPC4-201ENST00000370828 JPT2Q9H910 190 aa10□□□□□ -0.81
GPC4-201ENST00000370828 THBDP07204 575 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 MDS2Q8NDY4 140 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 SMIM26A0A096LP01 95 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 H3BT86 120 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 IGLV2-8P01709 118 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
GPC4-201ENST00000370828 Q6Q795 121 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 DYNAPQ8N1N2 210 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 BAALCQ8WXS3 180 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 COL6A6A6NMZ7 2263 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 KMT2EQ8IZD2 1858 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 IGHV3-53P01767 116 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 Q8TCH9 128 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 SIRPDQ9H106 197 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 MSRB2Q9Y3D2 182 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 ATP5EP56381 51 aaPredicted RBP9.99□□□□□ -0.81
GPC4-201ENST00000370828 RHPN1-AS1Q9BWJ2 59 aa9.99□□□□□ -0.81
GPC4-201ENST00000370828 F6UB75 175 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 C11orf53Q8IXP5 236 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 ZNF503Q96F45 646 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 IMUPQ9GZP8 106 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 LY6HO94772 140 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 RNF152Q8N8N0 203 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 MPLKIPQ8TAP9 179 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 TRBV7-1A0A0A6YYK4 115 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 LYRM9A8MSI8 78 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 TRAV12-1A0A0B4J245 112 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 A0A1B0GXF2 115 aa9.98□□□□□ -0.81
GPC4-201ENST00000370828 RPL35AP18077 110 aaKnown RBP9.98□□□□□ -0.81
GPC4-201ENST00000370828 FOXE3Q13461 319 aa9.97□□□□□ -0.81
GPC4-201ENST00000370828 PRR30Q53SZ7 412 aaPredicted RBP9.97□□□□□ -0.81
GPC4-201ENST00000370828 LINC00322Q6ZN03 302 aaPredicted RBP9.97□□□□□ -0.81
GPC4-201ENST00000370828 TRBV10-2A0A0K0K1G8 114 aa9.97□□□□□ -0.81
GPC4-201ENST00000370828 RPL39LQ96EH5 51 aaKnown RBP9.97□□□□□ -0.81
GPC4-201ENST00000370828 ANAPC1Q9H1A4 1944 aa9.97□□□□□ -0.81
GPC4-201ENST00000370828 PLXNB1O43157 2135 aa9.97□□□□□ -0.81
GPC4-201ENST00000370828 MUSTN1Q8IVN3 82 aa9.97□□□□□ -0.81
GPC4-201ENST00000370828 C7orf69Q9H7B7 122 aa9.97□□□□□ -0.81
GPC4-201ENST00000370828 TRGV4A0A0C4DH28 118 aa9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms