RNA–Protein interactions for RNA: ENST00000369236.5

GFRA1-203, Transcript of GDNF family receptor alpha 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GFRA1, Length 9,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1-203ENST00000369236 UBE2E2Q96LR5 201 aa9.65□□□□□ -0.87
GFRA1-203ENST00000369236 SLC25A45Q8N413 288 aa9.65□□□□□ -0.87
GFRA1-203ENST00000369236 C3orf36Q3SXR2 165 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 IGHV1OR15-1A0A075B7D0 117 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 IGKV1-12A0A0C4DH73 117 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 IGKV1D-12P01611 117 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 LINC01560Q8TB33 94 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 RNASE6Q93091 150 aaKnown RBP9.64□□□□□ -0.87
GFRA1-203ENST00000369236 CSPG4Q6UVK1 2322 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 TMEM61Q8N0U2 210 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 SAP25Q8TEE9 199 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 RNF183Q96D59 192 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 ZNF837Q96EG3 531 aaPredicted RBP9.64□□□□□ -0.87
GFRA1-203ENST00000369236 UPK3BQ9BT76 320 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 C1orf195Q5TG92 126 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 RHPN1-AS1Q9BWJ2 59 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 SPG11Q96JI7 2443 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 A0A087WV48 116 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 CD24P25063 80 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 MPLKIPQ8TAP9 179 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 NDUFA4L2Q9NRX3 87 aa9.64□□□□□ -0.87
GFRA1-203ENST00000369236 C22orf46C9J442 243 aa9.63□□□□□ -0.87
GFRA1-203ENST00000369236 RSPO4Q2I0M5 234 aaPredicted RBP9.63□□□□□ -0.87
GFRA1-203ENST00000369236 Q6P435 159 aa9.63□□□□□ -0.87
GFRA1-203ENST00000369236 COX7B2Q8TF08 81 aa9.63□□□□□ -0.87
GFRA1-203ENST00000369236 NDUFA7O95182 113 aa9.63□□□□□ -0.87
GFRA1-203ENST00000369236 VWC2Q2TAL6 325 aa9.63□□□□□ -0.87
GFRA1-203ENST00000369236 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
GFRA1-203ENST00000369236 C10orf55Q5SWW7 151 aa9.63□□□□□ -0.87
GFRA1-203ENST00000369236 LYPD3O95274 346 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 EFNA4P52798 201 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 BUB3O43684 328 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 TRBV12-3P01733 135 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 PIFOQ8TCI5 191 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 TMEM178BH3BS89 294 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 FAM27E3Q08E93 113 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 BRWD3Q6RI45 1802 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 NXPH4O95158 308 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 IGHV1-46P01743 117 aa9.62□□□□□ -0.87
GFRA1-203ENST00000369236 IGHV1-18A0A0C4DH31 117 aa9.61□□□□□ -0.87
GFRA1-203ENST00000369236 H3BRN7 92 aa9.61□□□□□ -0.87
GFRA1-203ENST00000369236 DSCAMO60469 2012 aa9.61□□□□□ -0.87
GFRA1-203ENST00000369236 IMUPQ9GZP8 106 aa9.61□□□□□ -0.87
GFRA1-203ENST00000369236 PRB1P04280 392 aa9.61□□□□□ -0.87
GFRA1-203ENST00000369236 SND1-IT1Q9HBX3 110 aa9.61□□□□□ -0.87
GFRA1-203ENST00000369236 LENEPQ9Y5L5 61 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 PIP4P2Q8N4L2 257 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 A4D1N5 150 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 RNF152Q8N8N0 203 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 LTBRP36941 435 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 FXYD5Q96DB9 178 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 ETV2O00321 342 aaPredicted RBP9.6□□□□□ -0.87
GFRA1-203ENST00000369236 CDPF1Q6NVV7 123 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 PSPNO60542 156 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 DEFB130BP0DP73 79 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 DEFB130AP0DP74 79 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 CD177Q8N6Q3 437 aa9.6□□□□□ -0.87
GFRA1-203ENST00000369236 OTOGLQ3ZCN5 2332 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 NOTCH4Q99466 2003 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 DEFB105AQ8NG35 78 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 K7EM74 188 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 IGKV1-16P04430 117 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 ZNF726P1Q15940 193 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 K7EN84 100 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 PRB2P02812 416 aaPredicted RBP9.59□□□□□ -0.87
GFRA1-203ENST00000369236 UBE2AP49459 152 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 MRPL53Q96EL3 112 aaKnown RBP9.59□□□□□ -0.87
GFRA1-203ENST00000369236 STPG1Q5TH74 334 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 FANCD2OSQ96PS1 177 aa9.59□□□□□ -0.87
GFRA1-203ENST00000369236 ETDCA0A1B0GVM5 59 aa9.59□□□□□ -0.88
GFRA1-203ENST00000369236 WIPF3A6NGB9 483 aa9.59□□□□□ -0.88
GFRA1-203ENST00000369236 C11orf44Q8N8P7 122 aa9.59□□□□□ -0.88
GFRA1-203ENST00000369236 SPAARA0A1B0GVQ0 90 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 FXYD2P54710 66 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 Q6ZRM9 215 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 PRR30Q53SZ7 412 aaPredicted RBP9.58□□□□□ -0.88
GFRA1-203ENST00000369236 MDS2Q8NDY4 140 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 KLHL30-AS1Q8NEE0 82 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 IGLV3-12A0A075B6K2 115 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 APOC4P55056 127 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 ZNRF2Q8NHG8 242 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 TRAV4A0A0B4J268 109 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 DAZ2Q13117 558 aaKnown RBP9.58□□□□□ -0.88
GFRA1-203ENST00000369236 SPINK13Q1W4C9 94 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 NSUN5P1Q3KNT7 163 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 DAZ4Q86SG3 579 aaKnown RBP9.58□□□□□ -0.88
GFRA1-203ENST00000369236 DAZ3Q9NR90 486 aaKnown RBP9.58□□□□□ -0.88
GFRA1-203ENST00000369236 RNF114Q9Y508 228 aa9.58□□□□□ -0.88
GFRA1-203ENST00000369236 VOPP1Q96AW1 172 aa9.57□□□□□ -0.88
GFRA1-203ENST00000369236 METRNQ9UJH8 293 aa9.57□□□□□ -0.88
GFRA1-203ENST00000369236 MRPS36P82909 103 aaKnown RBP9.57□□□□□ -0.88
GFRA1-203ENST00000369236 C9orf106Q8NAJ2 232 aa9.57□□□□□ -0.88
GFRA1-203ENST00000369236 A0A0G2JRQ6 117 aa9.57□□□□□ -0.88
GFRA1-203ENST00000369236 ZNF833PQ6ZTB9 187 aa9.57□□□□□ -0.88
GFRA1-203ENST00000369236 ANGP03950 147 aaKnown RBP9.57□□□□□ -0.88
GFRA1-203ENST00000369236 F5H768 121 aa9.57□□□□□ -0.88
GFRA1-203ENST00000369236 LRRC75A-AS1Q8N1F1 130 aa9.57□□□□□ -0.88
GFRA1-203ENST00000369236 NDUFA4O00483 81 aa9.56□□□□□ -0.88
GFRA1-203ENST00000369236 Q8NFD4 153 aa9.56□□□□□ -0.88
GFRA1-203ENST00000369236 FAM110DQ8TAY7 271 aaPredicted RBP9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms