RNA–Protein interactions for RNA: ENST00000368912.7

SEMA6C-202, Transcript of semaphorin 6C, humanhuman

TSL 1 (best)

Gene SEMA6C, Length 3,697 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-202ENST00000368912 S4R3C0 116 aa12.09□□□□□ -0.47
SEMA6C-202ENST00000368912 H3BTX0 84 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 H7C2G1 150 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 IGLC6P0CF74 106 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 ZNF56Q15929 161 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 HRCT1Q6UXD1 115 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 C1orf229Q6ZS94 237 aaPredicted RBP12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 TMEM101Q96IK0 257 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 PAXXQ9BUH6 204 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 ITPR2Q14571 2701 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 PGPA6NDG6 321 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 NPIPB3Q92617 1050 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 ARMS2P0C7Q2 107 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 PRB4P10163 310 aaPredicted RBP12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 GATD1Q8NB37 220 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 NTN5Q8WTR8 489 aaPredicted RBP12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 TMEM133Q9H2Q1 129 aa12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 RPUSD1Q9UJJ7 312 aaKnown RBP12.08□□□□□ -0.48
SEMA6C-202ENST00000368912 DUTP33316 252 aaKnown RBP12.07□□□□□ -0.48
SEMA6C-202ENST00000368912 HCP5Q6MZN7 132 aa12.07□□□□□ -0.48
SEMA6C-202ENST00000368912 KRTAP10-9P60411 292 aa12.07□□□□□ -0.48
SEMA6C-202ENST00000368912 IFI27L2Q9H2X8 130 aa12.07□□□□□ -0.48
SEMA6C-202ENST00000368912 CELSR1Q9NYQ6 3014 aa12.07□□□□□ -0.48
SEMA6C-202ENST00000368912 MAPKAPK5-AS1Q8N8E1 139 aa12.07□□□□□ -0.48
SEMA6C-202ENST00000368912 ZNF503Q96F45 646 aa12.07□□□□□ -0.48
SEMA6C-202ENST00000368912 LINC01587Q99440 93 aa12.07□□□□□ -0.48
SEMA6C-202ENST00000368912 SIGLEC9Q9Y336 463 aa12.07□□□□□ -0.48
SEMA6C-202ENST00000368912 COX7A2P2O60397 106 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 CD7P09564 240 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 EFNA4P52798 201 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 LY6EQ16553 131 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 TRAV40A0A0B4J280 105 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 MYMXA0A1B0GTQ4 84 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 IGHV4-39P01824 125 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 LOXL3P58215 753 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 LINC00322Q6ZN03 302 aaPredicted RBP12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 ITPR3Q14573 2671 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 SLC25A20O43772 301 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 DPM2O94777 84 aa12.06□□□□□ -0.48
SEMA6C-202ENST00000368912 PROP1O75360 226 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 NDUFA3O95167 84 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 NDUFA7O95182 113 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 IGHV1-8P0DP01 117 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 ZNF256Q9Y2P7 627 aaPredicted RBP12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 CSMD2Q7Z408 3487 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 HIVEP2P31629 2446 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 TCL1BO95988 128 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 HLA-DRB4P13762 266 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 CNTFRP26992 372 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 TWIST1Q15672 202 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 MORN3Q6PF18 240 aaPredicted RBP12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 HLA-DRB4X5D2U9 266 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 CSMD1Q96PZ7 3565 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 FAM236AA0A1B0GUQ0 79 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 FAM236BA0A1B0GV22 79 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 PMVKQ15126 192 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 PDPNQ86YL7 162 aa12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 MRPL32Q9BYC8 188 aaKnown RBP12.05□□□□□ -0.48
SEMA6C-202ENST00000368912 FLNAP21333 2647 aaKnown RBP12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 SMKR1H3BMG3 65 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 TEX36Q5VZQ5 186 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 GAGE2AQ6NT46 116 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 LRRC75A-AS1Q8N1F1 130 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 ZFP36P26651 326 aaKnown RBP12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 CKS2P33552 79 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 OR9G1Q8NH87 305 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 GCN1Q92616 2671 aaKnown RBP12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 A0A096LNJ9 63 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 TAL2Q16559 108 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 LINC00527Q9UJ94 153 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 PKIGQ9Y2B9 76 aa12.04□□□□□ -0.48
SEMA6C-202ENST00000368912 TRBV6-6A0A0A6YYG2 114 aa12.03□□□□□ -0.48
SEMA6C-202ENST00000368912 RUSC1-AS1Q66K80 236 aa12.03□□□□□ -0.48
SEMA6C-202ENST00000368912 OR11H6Q8NGC7 330 aa12.03□□□□□ -0.48
SEMA6C-202ENST00000368912 IGHV4-30-2A0A087WSY4 118 aa12.03□□□□□ -0.48
SEMA6C-202ENST00000368912 MDFICQ9P1T7 246 aa12.03□□□□□ -0.48
SEMA6C-202ENST00000368912 RNF223E7ERA6 249 aa12.02□□□□□ -0.48
SEMA6C-202ENST00000368912 LEPP41159 167 aa12.02□□□□□ -0.48
SEMA6C-202ENST00000368912 PRNTQ86SH4 94 aa12.02□□□□□ -0.48
SEMA6C-202ENST00000368912 ZNF329Q86UD4 541 aa12.02□□□□□ -0.48
SEMA6C-202ENST00000368912 IGHV3-35A0A0C4DH35 117 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 IGHV4-61A0A0C4DH41 118 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 DUSP14O95147 198 aaKnown RBP12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 ORMDL3Q8N138 153 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 RITA1Q96K30 269 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 ORM2P19652 201 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 MORN5Q5VZ52 161 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 Q6Q795 121 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 AMN1Q8IY45 258 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 TMEM158Q8WZ71 300 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 ASCL2Q99929 193 aa12.02□□□□□ -0.49
SEMA6C-202ENST00000368912 ATP5LO75964 103 aa12.01□□□□□ -0.49
SEMA6C-202ENST00000368912 PRR20EP86478 221 aa12.01□□□□□ -0.49
SEMA6C-202ENST00000368912 PRR20CP86479 221 aa12.01□□□□□ -0.49
SEMA6C-202ENST00000368912 PRR20DP86480 221 aa12.01□□□□□ -0.49
SEMA6C-202ENST00000368912 PRR20BP86481 221 aa12.01□□□□□ -0.49
SEMA6C-202ENST00000368912 PRR20AP86496 221 aa12.01□□□□□ -0.49
SEMA6C-202ENST00000368912 TMEM219Q86XT9 240 aa12.01□□□□□ -0.49
SEMA6C-202ENST00000368912 TPSG1Q9NRR2 321 aa12.01□□□□□ -0.49
SEMA6C-202ENST00000368912 TIMM23O14925 209 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 97.2 ms