RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 TENM3Q9P273 2699 aa9.95□□□□□ -0.82
TPM3-211ENST00000368531 PLAC8L1A1L4L8 177 aa9.95□□□□□ -0.82
TPM3-211ENST00000368531 SNURFLB1AK76 121 aa9.95□□□□□ -0.82
TPM3-211ENST00000368531 IGLV2-8P01709 118 aa9.95□□□□□ -0.82
TPM3-211ENST00000368531 SPART-AS1P0CW21 52 aa9.95□□□□□ -0.82
TPM3-211ENST00000368531 COX8CQ7Z4L0 72 aa9.95□□□□□ -0.82
TPM3-211ENST00000368531 IL17DQ8TAD2 202 aa9.95□□□□□ -0.82
TPM3-211ENST00000368531 SDF2L1Q9HCN8 221 aa9.95□□□□□ -0.82
TPM3-211ENST00000368531 NOP10Q9NPE3 64 aaKnown RBP9.95□□□□□ -0.82
TPM3-211ENST00000368531 MDFICQ9P1T7 246 aa9.95□□□□□ -0.82
TPM3-211ENST00000368531 TMSB15BA0A087X1C1 80 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 ZNF727A8MUV8 499 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 TYMSP04818 313 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 ZNF415Q09FC8 603 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 OR5I1Q13606 314 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 C11orf72Q8NBR9 251 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 OCC1Q8TAD7 63 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 KCNS1Q96KK3 526 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 SMIM7Q9BQ49 75 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 DKK2Q9UBU2 259 aa9.94□□□□□ -0.82
TPM3-211ENST00000368531 TIMM8BQ9Y5J9 83 aaPredicted RBP9.94□□□□□ -0.82
TPM3-211ENST00000368531 HUWE1Q7Z6Z7 4374 aaKnown RBP9.93□□□□□ -0.82
TPM3-211ENST00000368531 TRGV11A0A075B6L2 103 aa9.93□□□□□ -0.82
TPM3-211ENST00000368531 IGKV3D-20A0A0C4DH25 116 aa9.93□□□□□ -0.82
TPM3-211ENST00000368531 B4DEV8 164 aa9.93□□□□□ -0.82
TPM3-211ENST00000368531 DEFB130BP0DP73 79 aa9.93□□□□□ -0.82
TPM3-211ENST00000368531 DEFB130AP0DP74 79 aa9.93□□□□□ -0.82
TPM3-211ENST00000368531 IGHV3-16A0A0C4DH30 117 aa9.92□□□□□ -0.82
TPM3-211ENST00000368531 GRIFINA4D1Z8 144 aa9.92□□□□□ -0.82
TPM3-211ENST00000368531 C9JCJ5 164 aa9.92□□□□□ -0.82
TPM3-211ENST00000368531 NDUFS6O75380 124 aaKnown RBP9.92□□□□□ -0.82
TPM3-211ENST00000368531 TCL1AP56279 114 aa9.92□□□□□ -0.82
TPM3-211ENST00000368531 RPL19P84098 196 aaKnown RBP9.92□□□□□ -0.82
TPM3-211ENST00000368531 C12orf74Q32Q52 190 aa9.92□□□□□ -0.82
TPM3-211ENST00000368531 TDRG1Q3Y452 100 aa9.92□□□□□ -0.82
TPM3-211ENST00000368531 DAZAP1Q96EP5 407 aaKnown RBP9.92□□□□□ -0.82
TPM3-211ENST00000368531 GAGE12BA1L429 117 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 KRBOX1C9JBD0 128 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 GAGE7O76087 117 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 GAGE12FP0CL80 117 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 GAGE12GP0CL81 117 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 GAGE12IP0CL82 117 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 DAD1P61803 113 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 IBA57Q5T440 356 aaKnown RBP9.91□□□□□ -0.82
TPM3-211ENST00000368531 ZFAND6Q6FIF0 208 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 SMIM12Q96EX1 92 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 SMDT1Q9H4I9 107 aa9.91□□□□□ -0.82
TPM3-211ENST00000368531 TRGV1A0A0A0MS02 117 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 LYRM9A8MSI8 78 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 K7EN84 100 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 HTN3P15516 51 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 S100A4P26447 101 aaKnown RBP9.9□□□□□ -0.82
TPM3-211ENST00000368531 SOHLH1Q5JUK2 328 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 Q6ZTC4 211 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 Q6ZTI0 123 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 COMMD7Q86VX2 200 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 MUC7Q8TAX7 377 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 BIN3Q9NQY0 253 aa9.9□□□□□ -0.82
TPM3-211ENST00000368531 MRPL16Q9NX20 251 aaKnown RBP9.9□□□□□ -0.82
TPM3-211ENST00000368531 TEX48A0A1B0GUV7 120 aa9.89□□□□□ -0.83
TPM3-211ENST00000368531 ASIPP42127 132 aa9.89□□□□□ -0.83
TPM3-211ENST00000368531 DAZ2Q13117 558 aaKnown RBP9.89□□□□□ -0.83
TPM3-211ENST00000368531 TMEM241Q24JQ0 296 aa9.89□□□□□ -0.83
TPM3-211ENST00000368531 LINC01559Q495D7 138 aa9.89□□□□□ -0.83
TPM3-211ENST00000368531 RNASE7Q9H1E1 156 aaKnown RBP9.89□□□□□ -0.83
TPM3-211ENST00000368531 TGP01266 2768 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 C19orf71A6NCJ1 209 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 H3BVH4 76 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 P01737 135 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 SFTA3P0C7M3 94 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 RNASE3P12724 160 aaKnown RBP9.88□□□□□ -0.83
TPM3-211ENST00000368531 FAM74A3Q4VXF1 159 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 NUDT10Q8NFP7 164 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 OR2D3Q8NGH3 330 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 PHLDA1Q8WV24 401 aaPredicted RBP9.88□□□□□ -0.83
TPM3-211ENST00000368531 NUDT11Q96G61 164 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 SPXQ9BT56 116 aa9.88□□□□□ -0.83
TPM3-211ENST00000368531 SPINK4O60575 86 aa9.87□□□□□ -0.83
TPM3-211ENST00000368531 GZMBP10144 247 aa9.87□□□□□ -0.83
TPM3-211ENST00000368531 LINC01551Q86U37 167 aa9.87□□□□□ -0.83
TPM3-211ENST00000368531 C9orf85Q96MD7 179 aa9.87□□□□□ -0.83
TPM3-211ENST00000368531 NAT8Q9UHE5 227 aa9.87□□□□□ -0.83
TPM3-211ENST00000368531 LY96Q9Y6Y9 160 aa9.87□□□□□ -0.83
TPM3-211ENST00000368531 MUC4Q99102 2169 aa9.87□□□□□ -0.83
TPM3-211ENST00000368531 TRGV2A0A075B6R0 118 aa9.86□□□□□ -0.83
TPM3-211ENST00000368531 LINC00862A6NCI5 91 aa9.86□□□□□ -0.83
TPM3-211ENST00000368531 M0R2P5 195 aa9.86□□□□□ -0.83
TPM3-211ENST00000368531 ARMS2P0C7Q2 107 aa9.86□□□□□ -0.83
TPM3-211ENST00000368531 ERVFC1-1P60608 527 aa9.86□□□□□ -0.83
TPM3-211ENST00000368531 RPL23P62829 140 aaKnown RBP9.86□□□□□ -0.83
TPM3-211ENST00000368531 ADIRFQ15847 76 aa9.86□□□□□ -0.83
TPM3-211ENST00000368531 ZNF575Q86XF7 245 aa9.86□□□□□ -0.83
TPM3-211ENST00000368531 DEFB131BA0A096LNP1 70 aa9.85□□□□□ -0.83
TPM3-211ENST00000368531 TRAV10A0A0B4J240 114 aa9.85□□□□□ -0.83
TPM3-211ENST00000368531 GATCO43716 136 aaKnown RBP9.85□□□□□ -0.83
TPM3-211ENST00000368531 IGHV3-53P01767 116 aa9.85□□□□□ -0.83
TPM3-211ENST00000368531 SSTP61278 116 aa9.85□□□□□ -0.83
TPM3-211ENST00000368531 LGALS9BQ3B8N2 356 aa9.85□□□□□ -0.83
TPM3-211ENST00000368531 LINC00612Q8N6U2 182 aa9.85□□□□□ -0.83
TPM3-211ENST00000368531 MUC21A0A0G2JKD1 596 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms