RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 ABCA13Q86UQ4 5058 aa8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 PHOX2AO14813 284 aa8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 SH2D1AO60880 128 aa8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 CA1P00915 261 aaPredicted RBP8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 TRGC2P03986 189 aa8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 PRB4P10163 310 aaPredicted RBP8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 FOXA3P55318 350 aaPredicted RBP8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 SNRPD3P62318 126 aaKnown RBP8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 RASL11AQ6T310 242 aa8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 NUP35Q8NFH5 326 aa8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 OR8A1Q8NGG7 326 aa8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 OR2D3Q8NGH3 330 aa8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 NEU1Q99519 415 aa8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 SAV1Q9H4B6 383 aaPredicted RBP8.32□□□□□ -1.08
CSNK1E-202ENST00000366216 TRAV25A0A0B4J276 109 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 XKRY2A2RUG3 117 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 FABP5P3A8MUU1 101 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 HIGD1CA8MV81 97 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 LY6G6CO95867 125 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 TCL1AP56279 114 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 RPS20P60866 119 aaKnown RBP8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 DEFB114Q30KQ6 69 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 ACTL10Q5JWF8 245 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 ATP5L2Q7Z4Y8 100 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 WFDC3Q8IUB2 231 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 DYNLRB2Q8TF09 96 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 FAM19A4Q96LR4 140 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 C19orf73Q9NVV2 129 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 VPS13DQ5THJ4 4388 aa8.31□□□□□ -1.08
CSNK1E-202ENST00000366216 A8MZ25 164 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 SAP30O75446 220 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 ZNF80P51504 273 aaPredicted RBP8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 HIST1H1AQ02539 215 aaPredicted RBP8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 Q6AWC8 147 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 WDR73Q6P4I2 378 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 RBPMS2Q6ZRY4 209 aaKnown RBP8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 APRG1Q8IVJ8 170 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 ZFP82Q8N141 532 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 GTSF1Q8WW33 167 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 ODF3Q96PU9 254 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 GNB1LQ9BYB4 327 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 SELENOKQ9Y6D0 94 aa8.3□□□□□ -1.08
CSNK1E-202ENST00000366216 DNAH6Q9C0G6 4158 aa8.29□□□□□ -1.08
CSNK1E-202ENST00000366216 LOC105371267A0A1B0GV96 52 aa8.29□□□□□ -1.08
CSNK1E-202ENST00000366216 TMEM189A5PLL7 270 aa8.29□□□□□ -1.08
CSNK1E-202ENST00000366216 MT-ND6P03923 174 aa8.29□□□□□ -1.08
CSNK1E-202ENST00000366216 ZNF688P0C7X2 276 aa8.29□□□□□ -1.08
CSNK1E-202ENST00000366216 CRISP2P16562 243 aa8.29□□□□□ -1.08
CSNK1E-202ENST00000366216 TFPI2P48307 235 aa8.29□□□□□ -1.08
CSNK1E-202ENST00000366216 Q8N1Y9 231 aa8.29□□□□□ -1.08
CSNK1E-202ENST00000366216 TRAPPC1Q9Y5R8 145 aa8.29□□□□□ -1.08
CSNK1E-202ENST00000366216 A0A0J9YX75 114 aa8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 F6UB75 175 aa8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 DUSP14O95147 198 aaKnown RBP8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 ZNF705DP0CH99 300 aaPredicted RBP8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 ZNF705BP0CI00 300 aaPredicted RBP8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 PSMG4Q5JS54 123 aa8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 FOXI2Q6ZQN5 318 aa8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 TMEM61Q8N0U2 210 aa8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 ZFAND2AQ8N6M9 145 aa8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 FRZBQ92765 325 aa8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 SPAG8Q99932 426 aaPredicted RBP8.28□□□□□ -1.08
CSNK1E-202ENST00000366216 A0A1B0GXF2 115 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 SNURFLB1AK76 121 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST1H2BKO60814 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HLA-DQA1P01909 254 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 S100A6P06703 90 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST1H2BJP06899 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 TRGC1P0CF51 173 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 GZMBP10144 247 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST1H2BOP23527 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST1H2BBP33778 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST1H2BDP58876 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 DEFB1P60022 68 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST1H2BCP62807 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 FABP9Q0Z7S8 132 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST2H2BEQ16778 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 CD300EQ496F6 205 aaPredicted RBP8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 MRPL54Q6P161 138 aaKnown RBP8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 EBLN2Q6P2I7 272 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 TMEM136Q6ZRR5 245 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST1H2BHQ93079 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 PGLYRP4Q96LB8 373 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST1H2BNQ99877 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 HIST1H2BMQ99879 126 aa8.27□□□□□ -1.09
CSNK1E-202ENST00000366216 PKHD1P08F94 4074 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 TRAV21A0A0B4J279 112 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 A0A1B0GW15 77 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 OR4C46A6NHA9 309 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 A8MTW9 85 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 KLLNB2CW77 178 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 SPINK4O60575 86 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 ORM1P02763 201 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 LEPP41159 167 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 HBBP68871 147 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 ZNF575Q86XF7 245 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 OR2K2Q8NGT1 345 aa8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 MRPL18Q9H0U6 180 aaKnown RBP8.26□□□□□ -1.09
CSNK1E-202ENST00000366216 DYNC1H1Q14204 4646 aaKnown RBP8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms