RNA–Protein interactions for RNA: ENST00000361530.10

CNKSR1-201, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,625 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-201ENST00000361530 TMEM158Q8WZ71 300 aa11.88□□□□□ -0.51
CNKSR1-201ENST00000361530 NXT2Q9NPJ8 142 aaKnown RBP11.88□□□□□ -0.51
CNKSR1-201ENST00000361530 IGLV2-18A0A075B6J9 118 aa11.88□□□□□ -0.51
CNKSR1-201ENST00000361530 IGKV2D-26A0A0A0MRZ7 120 aa11.88□□□□□ -0.51
CNKSR1-201ENST00000361530 K7ERJ3 54 aa11.88□□□□□ -0.51
CNKSR1-201ENST00000361530 IGF1P05019 195 aa11.88□□□□□ -0.51
CNKSR1-201ENST00000361530 ATP5G2Q06055 141 aa11.88□□□□□ -0.51
CNKSR1-201ENST00000361530 HHLA3Q9XRX5 114 aa11.88□□□□□ -0.51
CNKSR1-201ENST00000361530 COL12A1Q99715 3063 aa11.87□□□□□ -0.51
CNKSR1-201ENST00000361530 C19orf84I3L1E1 186 aa11.87□□□□□ -0.51
CNKSR1-201ENST00000361530 PRR9Q5T870 116 aa11.87□□□□□ -0.51
CNKSR1-201ENST00000361530 C9orf47Q6ZRZ4 202 aa11.87□□□□□ -0.51
CNKSR1-201ENST00000361530 C20orf173Q96LM9 149 aa11.87□□□□□ -0.51
CNKSR1-201ENST00000361530 ITPR1Q14643 2758 aa11.87□□□□□ -0.51
CNKSR1-201ENST00000361530 ABCA2Q9BZC7 2435 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 MAP1AP78559 2803 aaPredicted RBP11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 K7EMI3 77 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 Q8N8P6 123 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 PIFOQ8TCI5 191 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 ZMAT4Q9H898 229 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 TRAV41A0A0B4J266 112 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 TRBV12-3P01733 135 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 SMAGPQ0VAQ4 97 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 NRACQ8N912 160 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 UFC1Q9Y3C8 167 aa11.86□□□□□ -0.51
CNKSR1-201ENST00000361530 C19orf54Q5BKX5 351 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 UNQ9165/PRO28630Q6UXU0 137 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 BRD3OSQ6XYD6 125 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 GTSCR1Q86UQ5 136 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 MRPL53Q96EL3 112 aaKnown RBP11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 C16orf92Q96LL3 132 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 SPRY2O43597 315 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 BRI3O95415 125 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 DEFB1P60022 68 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 CKS1BP61024 79 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 FOXC2Q99958 501 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 CHAC1Q9BUX1 264 aa11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 NHP2Q9NX24 153 aaKnown RBP11.85□□□□□ -0.51
CNKSR1-201ENST00000361530 TEX48A0A1B0GUV7 120 aa11.84□□□□□ -0.51
CNKSR1-201ENST00000361530 GLMPQ8WWB7 406 aa11.84□□□□□ -0.51
CNKSR1-201ENST00000361530 GTSF1LQ9H1H1 148 aa11.84□□□□□ -0.51
CNKSR1-201ENST00000361530 SMIM17P0DL12 118 aa11.84□□□□□ -0.51
CNKSR1-201ENST00000361530 HIF1ANQ9NWT6 349 aa11.84□□□□□ -0.51
CNKSR1-201ENST00000361530 H3BVH4 76 aa11.83□□□□□ -0.52
CNKSR1-201ENST00000361530 SPANXN1Q5VSR9 72 aa11.83□□□□□ -0.52
CNKSR1-201ENST00000361530 GPHB5Q86YW7 130 aa11.83□□□□□ -0.52
CNKSR1-201ENST00000361530 ITLN2Q8WWU7 325 aaPredicted RBP11.83□□□□□ -0.52
CNKSR1-201ENST00000361530 MOB4Q9Y3A3 225 aa11.83□□□□□ -0.52
CNKSR1-201ENST00000361530 IGHV4-39P01824 125 aa11.83□□□□□ -0.52
CNKSR1-201ENST00000361530 IGKCP01834 107 aa11.83□□□□□ -0.52
CNKSR1-201ENST00000361530 ARL3P36405 182 aa11.82□□□□□ -0.52
CNKSR1-201ENST00000361530 ZC2HC1BQ5TFG8 222 aa11.82□□□□□ -0.52
CNKSR1-201ENST00000361530 TMEM160Q9NX00 188 aa11.82□□□□□ -0.52
CNKSR1-201ENST00000361530 IGHV4-4A0A075B6R2 117 aa11.82□□□□□ -0.52
CNKSR1-201ENST00000361530 TRBV25-1A0A075B6N4 114 aa11.81□□□□□ -0.52
CNKSR1-201ENST00000361530 TMEM8BA6NDV4 472 aa11.81□□□□□ -0.52
CNKSR1-201ENST00000361530 FAM223BA6NKX1 122 aa11.81□□□□□ -0.52
CNKSR1-201ENST00000361530 FAM223AQ8IWN6 122 aa11.81□□□□□ -0.52
CNKSR1-201ENST00000361530 IGHV1-69DA0A0B4J2H0 117 aa11.8□□□□□ -0.52
CNKSR1-201ENST00000361530 IGHV1-69P01742 117 aa11.8□□□□□ -0.52
CNKSR1-201ENST00000361530 LAGE3Q14657 143 aa11.8□□□□□ -0.52
CNKSR1-201ENST00000361530 TRAV40A0A0B4J280 105 aa11.8□□□□□ -0.52
CNKSR1-201ENST00000361530 C9orf139Q6ZV77 190 aa11.8□□□□□ -0.52
CNKSR1-201ENST00000361530 ZFAND2AQ8N6M9 145 aa11.8□□□□□ -0.52
CNKSR1-201ENST00000361530 MRPL35Q9NZE8 188 aaKnown RBP11.8□□□□□ -0.52
CNKSR1-201ENST00000361530 DPM2O94777 84 aa11.79□□□□□ -0.52
CNKSR1-201ENST00000361530 IGHV3-11P01762 117 aa11.79□□□□□ -0.52
CNKSR1-201ENST00000361530 LY6EQ16553 131 aa11.79□□□□□ -0.52
CNKSR1-201ENST00000361530 HIGD1BQ9P298 99 aa11.79□□□□□ -0.52
CNKSR1-201ENST00000361530 ATP5LO75964 103 aa11.79□□□□□ -0.52
CNKSR1-201ENST00000361530 HERV-K104P63124 156 aa11.79□□□□□ -0.52
CNKSR1-201ENST00000361530 KLK15Q9H2R5 256 aa11.79□□□□□ -0.52
CNKSR1-201ENST00000361530 IGHV4-61A0A0C4DH41 118 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 IGHV4-38-2P0DP08 117 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 CRIP2P52943 208 aaPredicted RBP11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 CEND1Q8N111 149 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 SIGMAR1Q99720 223 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 F6UB75 175 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 M0R381 172 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 SOCS3O14543 225 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 LCNL1Q6ZST4 164 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 MYOZ3Q8TDC0 251 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 CELSR2Q9HCU4 2923 aa11.78□□□□□ -0.52
CNKSR1-201ENST00000361530 WFDC2Q14508 124 aa11.77□□□□□ -0.52
CNKSR1-201ENST00000361530 Q6ZS46 218 aa11.77□□□□□ -0.52
CNKSR1-201ENST00000361530 IGKV3-7A0A075B6H7 116 aa11.77□□□□□ -0.53
CNKSR1-201ENST00000361530 GNLYP22749 145 aa11.77□□□□□ -0.53
CNKSR1-201ENST00000361530 SRSF1Q07955 248 aaKnown RBP eCLIP11.77□□□□□ -0.53
CNKSR1-201ENST00000361530 PHLDA1Q8WV24 401 aaPredicted RBP11.77□□□□□ -0.53
CNKSR1-201ENST00000361530 LINC00477Q96M19 166 aa11.77□□□□□ -0.53
CNKSR1-201ENST00000361530 LENEPQ9Y5L5 61 aa11.77□□□□□ -0.53
CNKSR1-201ENST00000361530 SPG11Q96JI7 2443 aa11.77□□□□□ -0.53
CNKSR1-201ENST00000361530 NDUFA4O00483 81 aa11.76□□□□□ -0.53
CNKSR1-201ENST00000361530 MTURNQ8N3F0 131 aa11.76□□□□□ -0.53
CNKSR1-201ENST00000361530 RPL11P62913 178 aaKnown RBP11.76□□□□□ -0.53
CNKSR1-201ENST00000361530 PSMG4Q5JS54 123 aa11.76□□□□□ -0.53
CNKSR1-201ENST00000361530 MAPKAPK5-AS1Q8N8E1 139 aa11.76□□□□□ -0.53
CNKSR1-201ENST00000361530 TSSC4Q9Y5U2 329 aaPredicted RBP11.76□□□□□ -0.53
CNKSR1-201ENST00000361530 BLCAPP62952 87 aa11.75□□□□□ -0.53
CNKSR1-201ENST00000361530 ANXA2RQ3ZCQ2 193 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms