RNA–Protein interactions for RNA: ENST00000361115.4

CCL28-201, Transcript of C-C motif chemokine ligand 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCL28, Length 3,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-201ENST00000361115 WT1-ASQ06250 92 aa6□□□□□ -1.45
CCL28-201ENST00000361115 RIGQ13278 110 aa6□□□□□ -1.45
CCL28-201ENST00000361115 GATD1Q8NB37 220 aa6□□□□□ -1.45
CCL28-201ENST00000361115 C20orf78Q9BR46 151 aa6□□□□□ -1.45
CCL28-201ENST00000361115 ESM1Q9NQ30 184 aa6□□□□□ -1.45
CCL28-201ENST00000361115 WI2-2373I1.2A0A1W2PRP0 233 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 CGB1A6NKQ9 187 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 J3QR89 54 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 GP9P14770 177 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 FAM201AQ5SY85 155 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 GOLT1AQ6ZVE7 132 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 THAP8Q8NA92 274 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 ZNF436-AS1Q8NC38 126 aaPredicted RBP5.99□□□□□ -1.45
CCL28-201ENST00000361115 SIRPDQ9H106 197 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 PPIFP30405 207 aaKnown RBP5.99□□□□□ -1.45
CCL28-201ENST00000361115 EXOC3-AS1Q8N2X6 119 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 PRELID3AQ96N28 172 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 PRO0461Q9UI25 63 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 SMKR1H3BMG3 65 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 HBDP02042 147 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 ERHP84090 104 aaKnown RBP5.99□□□□□ -1.45
CCL28-201ENST00000361115 AMN1Q8IY45 258 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 RAB9BQ9NP90 201 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 HIGD1BQ9P298 99 aa5.99□□□□□ -1.45
CCL28-201ENST00000361115 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.99□□□□□ -1.45
CCL28-201ENST00000361115 TRBV25-1A0A075B6N4 114 aa5.98□□□□□ -1.45
CCL28-201ENST00000361115 CEND1Q8N111 149 aa5.98□□□□□ -1.45
CCL28-201ENST00000361115 FBN1P35555 2871 aaKnown RBP5.98□□□□□ -1.45
CCL28-201ENST00000361115 IGHV3-21A0A0B4J1V1 117 aa5.98□□□□□ -1.45
CCL28-201ENST00000361115 C3orf84H3BNL1 204 aa5.98□□□□□ -1.45
CCL28-201ENST00000361115 CRIP1P50238 77 aa5.98□□□□□ -1.45
CCL28-201ENST00000361115 PROK1P58294 105 aa5.98□□□□□ -1.45
CCL28-201ENST00000361115 ZCCHC24Q8N2G6 241 aaKnown RBP5.98□□□□□ -1.45
CCL28-201ENST00000361115 HHLA3Q9XRX5 114 aa5.98□□□□□ -1.45
CCL28-201ENST00000361115 CSMD1Q96PZ7 3565 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 TM2D2Q9BX73 214 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 LINC00312Q9Y6C7 94 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 U3KQK5 164 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 A0A087WX48 190 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 NPYP01303 97 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 IGHV1-46P01743 117 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 MRPL51Q4U2R6 128 aaKnown RBP5.97□□□□□ -1.45
CCL28-201ENST00000361115 GAGE13Q4V321 117 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 GTSCR1Q86UQ5 136 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 ANAPC13Q9BS18 74 aa5.97□□□□□ -1.45
CCL28-201ENST00000361115 MRPL20Q9BYC9 149 aaKnown RBP5.97□□□□□ -1.45
CCL28-201ENST00000361115 ZNF469Q96JG9 3925 aaPredicted RBP5.97□□□□□ -1.45
CCL28-201ENST00000361115 TMSB15BA0A087X1C1 80 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 RS1O15537 224 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 MT-ATP8P03928 68 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 CT45A10P0DMU9 189 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 FHL3Q13643 280 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 C12orf74Q32Q52 190 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 FAM104BQ5XKR9 115 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 ZNF493Q6ZR52 646 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 MRAPQ8TCY5 172 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 KAAG1Q9UBP8 84 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 MXRA5Q9NR99 2828 aa5.96□□□□□ -1.45
CCL28-201ENST00000361115 MSMPQ1L6U9 139 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 LYZL1Q6UWQ5 148 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 NDUFA11Q86Y39 141 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 ORMDL3Q8N138 153 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 MAPKAPK5-AS1Q8N8E1 139 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 SYT8Q8NBV8 401 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 ZNF502Q8TBZ5 544 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 OTORQ9NRC9 128 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 NIPBLQ6KC79 2804 aaeCLIP5.96□□□□□ -1.46
CCL28-201ENST00000361115 A0A1B0GWB2 263 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 SPINK8P0C7L1 97 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 HCP5Q6MZN7 132 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 PIFOQ8TCI5 191 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 RITA1Q96K30 269 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 C17orf77Q96MU5 243 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 C1QTNF4Q9BXJ3 329 aa5.96□□□□□ -1.46
CCL28-201ENST00000361115 ACANP16112 2415 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 GAS8-AS1O95177 125 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 APELAP0DMC3 54 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 TNFAIP6P98066 277 aaPredicted RBP5.95□□□□□ -1.46
CCL28-201ENST00000361115 KLF17Q5JT82 389 aaPredicted RBP5.95□□□□□ -1.46
CCL28-201ENST00000361115 HIST2H2BDQ6DRA6 164 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 LCNL1Q6ZST4 164 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 C8orf46Q8TAG6 207 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 C8orf49Q96NF6 230 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 WWC2-AS2Q96NR7 200 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 TMEM178BH3BS89 294 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 TTC9CQ8N5M4 171 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 AJUBAQ96IF1 538 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 TPSG1Q9NRR2 321 aa5.95□□□□□ -1.46
CCL28-201ENST00000361115 A0A1W2PPI3 338 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 INS-IGF2F8WCM5 200 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 APOMO95445 188 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 SMCPP49901 116 aaPredicted RBP5.94□□□□□ -1.46
CCL28-201ENST00000361115 TIRAPP58753 221 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 FOXI1Q12951 378 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 Q8N2B8 174 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 U3KQE9 123 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 PLCE1Q9P212 2302 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 M0R1W7 72 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 CRYGBP07316 175 aa5.94□□□□□ -1.46
CCL28-201ENST00000361115 MALP21145 153 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms