RNA–Protein interactions for RNA: ENST00000360228.10

CACNA1A-201, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-201ENST00000360228 LINC00114Q6XXX2 140 aa13.93□□□□□ -0.18
CACNA1A-201ENST00000360228 SHANK2-AS3Q9BTD1 123 aa13.93□□□□□ -0.18
CACNA1A-201ENST00000360228 VSIG2Q96IQ7 327 aa13.93□□□□□ -0.18
CACNA1A-201ENST00000360228 SPACA3Q8IXA5 215 aa13.93□□□□□ -0.18
CACNA1A-201ENST00000360228 CACNA1AO00555 2505 aa13.93□□□□□ -0.18
CACNA1A-201ENST00000360228 C18orf32Q8TCD1 76 aa13.93□□□□□ -0.18
CACNA1A-201ENST00000360228 IGKV1-16P04430 117 aa13.93□□□□□ -0.18
CACNA1A-201ENST00000360228 CFPP27918 469 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 NREPQ16612 68 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 HIGD2BQ4VC39 106 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 TMEM14EPQ6UXP3 125 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 KIAA1671Q9BY89 1806 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 COX7B2Q8TF08 81 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 NTN5Q8WTR8 489 aaPredicted RBP13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 J3QQQ9 107 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 LINC00205P59089 165 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 IGHV1OR15-1A0A075B7D0 117 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 C8orf86Q6ZUL3 223 aa13.92□□□□□ -0.18
CACNA1A-201ENST00000360228 MPLKIPQ8TAP9 179 aa13.91□□□□□ -0.18
CACNA1A-201ENST00000360228 RUSC1-AS1Q66K80 236 aa13.91□□□□□ -0.18
CACNA1A-201ENST00000360228 ZNF134P52741 427 aa13.91□□□□□ -0.18
CACNA1A-201ENST00000360228 MRPL35Q9NZE8 188 aaKnown RBP13.91□□□□□ -0.18
CACNA1A-201ENST00000360228 ADAMTS7Q9UKP4 1686 aa13.91□□□□□ -0.18
CACNA1A-201ENST00000360228 TIRAPP58753 221 aa13.91□□□□□ -0.18
CACNA1A-201ENST00000360228 IGKV1-27A0A075B6S5 117 aa13.91□□□□□ -0.18
CACNA1A-201ENST00000360228 AMTNQ6UX39 209 aa13.91□□□□□ -0.18
CACNA1A-201ENST00000360228 IGKV3D-7A0A0C4DH55 119 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 C12orf74Q32Q52 190 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 Q6ZQT7 251 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 REG4Q9BYZ8 158 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 ANKHD1Q8IWZ3 2542 aaKnown RBP13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 C15orf62A8K5M9 175 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 ZNF883P0CG24 379 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 NDUFC2-KCTD14E9PQ53 114 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 BPESC1Q9GZL8 116 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 C9orf47Q6ZRZ4 202 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 MESP1Q9BRJ9 268 aa13.9□□□□□ -0.18
CACNA1A-201ENST00000360228 EPOPA6NHQ4 379 aa13.89□□□□□ -0.19
CACNA1A-201ENST00000360228 C20orf173Q96LM9 149 aa13.89□□□□□ -0.19
CACNA1A-201ENST00000360228 LY6HO94772 140 aa13.89□□□□□ -0.19
CACNA1A-201ENST00000360228 Q71RC1 249 aaPredicted RBP13.89□□□□□ -0.19
CACNA1A-201ENST00000360228 TNS1Q9HBL0 1735 aaKnown RBP13.89□□□□□ -0.19
CACNA1A-201ENST00000360228 SEM1Q6ZVN7 128 aa13.89□□□□□ -0.19
CACNA1A-201ENST00000360228 TEX36Q5VZQ5 186 aa13.89□□□□□ -0.19
CACNA1A-201ENST00000360228 SIGLEC8Q9NYZ4 499 aa13.89□□□□□ -0.19
CACNA1A-201ENST00000360228 A0A0G2JNJ9 132 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 Q9UFV3 132 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 TEX22C9J3V5 150 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 ZNF493Q6ZR52 646 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 CYYR1Q96J86 154 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 CYTL1Q9NRR1 136 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 NTN3O00634 580 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 NDUFB8O95169 186 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 WIPF2Q8TF74 440 aaPredicted RBP13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 GAFA1Q96PS6 74 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 ATP6V0E1O15342 81 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 MST1LQ2TV78 715 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 NOP10Q9NPE3 64 aaKnown RBP13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 IGKV1-12A0A0C4DH73 117 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 IGKV1D-12P01611 117 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 IGKV4-1P06312 121 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 TEN1Q86WV5 123 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 MAPK1IP1LQ8NDC0 245 aa13.88□□□□□ -0.19
CACNA1A-201ENST00000360228 MLANAQ16655 118 aa13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 Q9H8V8 135 aa13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 GNLYP22749 145 aa13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 FOXI2Q6ZQN5 318 aa13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 PINLYPA6NC86 204 aa13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 CASC2Q6XLA1 102 aa13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 SLC25A29Q8N8R3 303 aa13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 IGHV4OR15-8A0A075B7B6 117 aa13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 A0A087WW49 117 aa13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 EIF4EBP2Q13542 120 aaPredicted RBP13.87□□□□□ -0.19
CACNA1A-201ENST00000360228 A0A0J9YY99 117 aa13.86□□□□□ -0.19
CACNA1A-201ENST00000360228 RNF223E7ERA6 249 aa13.86□□□□□ -0.19
CACNA1A-201ENST00000360228 ATP5EP56381 51 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-201ENST00000360228 DEFB125Q8N687 156 aa13.86□□□□□ -0.19
CACNA1A-201ENST00000360228 LYPD2Q6UXB3 125 aa13.86□□□□□ -0.19
CACNA1A-201ENST00000360228 ETV2O00321 342 aaPredicted RBP13.86□□□□□ -0.19
CACNA1A-201ENST00000360228 H0Y9J4 135 aa13.86□□□□□ -0.19
CACNA1A-201ENST00000360228 H0YGX0 51 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 GFI1Q99684 422 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 HERV-K104P63124 156 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 CCL25O15444 150 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 J3QRE1 110 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 IGLL5B9A064 214 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 SMIM27A0A1W2PRY6 76 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 PRSS47A8MTI9 375 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 CFC1BP0CG36 223 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 CFC1P0CG37 223 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 DYNAPQ8N1N2 210 aa13.85□□□□□ -0.19
CACNA1A-201ENST00000360228 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.84□□□□□ -0.19
CACNA1A-201ENST00000360228 IGKV2-29A2NJV5 120 aaPredicted RBP13.84□□□□□ -0.19
CACNA1A-201ENST00000360228 WIPF3A6NGB9 483 aa13.84□□□□□ -0.19
CACNA1A-201ENST00000360228 UBE2AP49459 152 aa13.84□□□□□ -0.19
CACNA1A-201ENST00000360228 FOXE3Q13461 319 aa13.84□□□□□ -0.19
CACNA1A-201ENST00000360228 CRYGBP07316 175 aa13.84□□□□□ -0.19
CACNA1A-201ENST00000360228 IGLL1P15814 213 aa13.84□□□□□ -0.19
CACNA1A-201ENST00000360228 UBE2E1P51965 193 aa13.84□□□□□ -0.19
CACNA1A-201ENST00000360228 Q6ZWC4 215 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms