RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 GAGE7O76087 117 aa13.67□□□□□ -0.22
HLA-DRB1-201ENST00000360004 ORM1P02763 201 aa13.67□□□□□ -0.22
HLA-DRB1-201ENST00000360004 GAGE12FP0CL80 117 aa13.67□□□□□ -0.22
HLA-DRB1-201ENST00000360004 GAGE12GP0CL81 117 aa13.67□□□□□ -0.22
HLA-DRB1-201ENST00000360004 GAGE12IP0CL82 117 aa13.67□□□□□ -0.22
HLA-DRB1-201ENST00000360004 TCL1AP56279 114 aa13.67□□□□□ -0.22
HLA-DRB1-201ENST00000360004 TOR2AQ5JU69 321 aa13.67□□□□□ -0.22
HLA-DRB1-201ENST00000360004 FAM162BQ5T6X4 162 aa13.67□□□□□ -0.22
HLA-DRB1-201ENST00000360004 ZC2HC1AQ96GY0 325 aa13.67□□□□□ -0.22
HLA-DRB1-201ENST00000360004 CEBPGP53567 150 aa13.66□□□□□ -0.22
HLA-DRB1-201ENST00000360004 RAB14P61106 215 aa13.66□□□□□ -0.22
HLA-DRB1-201ENST00000360004 TRGV2A0A075B6R0 118 aa13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 IGLL5B9A064 214 aa13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 GNRH2O43555 120 aa13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 MGST1P10620 155 aaKnown RBP13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 S100A4P26447 101 aaKnown RBP13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 GNG4P50150 75 aa13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 DAZ2Q13117 558 aaKnown RBP13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 TDRG1Q3Y452 100 aa13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 PRR27Q6MZM9 219 aa13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 C11orf72Q8NBR9 251 aa13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 LYPD6BQ8NI32 183 aa13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 DERL1Q9BUN8 251 aa13.65□□□□□ -0.22
HLA-DRB1-201ENST00000360004 SH2D1AO60880 128 aa13.64□□□□□ -0.23
HLA-DRB1-201ENST00000360004 TYMSP04818 313 aa13.64□□□□□ -0.23
HLA-DRB1-201ENST00000360004 ATP5G1P05496 136 aa13.64□□□□□ -0.23
HLA-DRB1-201ENST00000360004 ZNF674Q2M3X9 581 aa13.64□□□□□ -0.23
HLA-DRB1-201ENST00000360004 CENPWQ5EE01 88 aa13.64□□□□□ -0.23
HLA-DRB1-201ENST00000360004 ZNF506Q5JVG8 444 aa13.64□□□□□ -0.23
HLA-DRB1-201ENST00000360004 MDFICQ9P1T7 246 aa13.64□□□□□ -0.23
HLA-DRB1-201ENST00000360004 B4DEV8 164 aa13.63□□□□□ -0.23
HLA-DRB1-201ENST00000360004 M0R036 132 aa13.63□□□□□ -0.23
HLA-DRB1-201ENST00000360004 OR5I1Q13606 314 aa13.63□□□□□ -0.23
HLA-DRB1-201ENST00000360004 Q6ZTI0 123 aa13.63□□□□□ -0.23
HLA-DRB1-201ENST00000360004 SPXQ9BT56 116 aa13.63□□□□□ -0.23
HLA-DRB1-201ENST00000360004 MRPL16Q9NX20 251 aaKnown RBP13.63□□□□□ -0.23
HLA-DRB1-201ENST00000360004 IGHV3-16A0A0C4DH30 117 aa13.62□□□□□ -0.23
HLA-DRB1-201ENST00000360004 RAB19A4D1S5 217 aa13.62□□□□□ -0.23
HLA-DRB1-201ENST00000360004 F5H768 121 aa13.62□□□□□ -0.23
HLA-DRB1-201ENST00000360004 ASIPP42127 132 aa13.62□□□□□ -0.23
HLA-DRB1-201ENST00000360004 FAM210AQ96ND0 272 aa13.62□□□□□ -0.23
HLA-DRB1-201ENST00000360004 TMSB15BA0A087X1C1 80 aa13.61□□□□□ -0.23
HLA-DRB1-201ENST00000360004 COX8CQ7Z4L0 72 aa13.61□□□□□ -0.23
HLA-DRB1-201ENST00000360004 DAZAP1Q96EP5 407 aaKnown RBP13.61□□□□□ -0.23
HLA-DRB1-201ENST00000360004 C11orf21Q9P2W6 132 aa13.61□□□□□ -0.23
HLA-DRB1-201ENST00000360004 TMEM250H0YL14 139 aa13.6□□□□□ -0.23
HLA-DRB1-201ENST00000360004 SPINK4O60575 86 aa13.6□□□□□ -0.23
HLA-DRB1-201ENST00000360004 LGALS9BQ3B8N2 356 aa13.6□□□□□ -0.23
HLA-DRB1-201ENST00000360004 BIN3Q9NQY0 253 aa13.6□□□□□ -0.23
HLA-DRB1-201ENST00000360004 CRIP1P50238 77 aa13.59□□□□□ -0.23
HLA-DRB1-201ENST00000360004 DNAH7Q8WXX0 4024 aa13.59□□□□□ -0.23
HLA-DRB1-201ENST00000360004 IGHV4-4A0A075B6R2 117 aa13.58□□□□□ -0.24
HLA-DRB1-201ENST00000360004 GRIFINA4D1Z8 144 aa13.58□□□□□ -0.24
HLA-DRB1-201ENST00000360004 C9JCJ5 164 aa13.58□□□□□ -0.24
HLA-DRB1-201ENST00000360004 M0R2P5 195 aa13.58□□□□□ -0.24
HLA-DRB1-201ENST00000360004 PEA15Q15121 130 aa13.58□□□□□ -0.24
HLA-DRB1-201ENST00000360004 SMIM12Q96EX1 92 aa13.58□□□□□ -0.24
HLA-DRB1-201ENST00000360004 NDUFAF3Q9BU61 184 aa13.58□□□□□ -0.24
HLA-DRB1-201ENST00000360004 MLST8Q9BVC4 326 aa13.58□□□□□ -0.24
HLA-DRB1-201ENST00000360004 PARLQ9H300 379 aa13.58□□□□□ -0.24
HLA-DRB1-201ENST00000360004 IGKV3D-20A0A0C4DH25 116 aa13.57□□□□□ -0.24
HLA-DRB1-201ENST00000360004 LINC00612Q8N6U2 182 aa13.57□□□□□ -0.24
HLA-DRB1-201ENST00000360004 KRBOX1C9JBD0 128 aa13.56□□□□□ -0.24
HLA-DRB1-201ENST00000360004 IGHV3-53P01767 116 aa13.56□□□□□ -0.24
HLA-DRB1-201ENST00000360004 TCTAP57738 103 aa13.56□□□□□ -0.24
HLA-DRB1-201ENST00000360004 LINC01559Q495D7 138 aa13.56□□□□□ -0.24
HLA-DRB1-201ENST00000360004 PGPEP1LA6NFU8 196 aa13.55□□□□□ -0.24
HLA-DRB1-201ENST00000360004 H3BVH4 76 aa13.55□□□□□ -0.24
HLA-DRB1-201ENST00000360004 FAM210BQ96KR6 192 aa13.55□□□□□ -0.24
HLA-DRB1-201ENST00000360004 SMIM7Q9BQ49 75 aa13.55□□□□□ -0.24
HLA-DRB1-201ENST00000360004 ZNF876PQ49A33 203 aa13.54□□□□□ -0.24
HLA-DRB1-201ENST00000360004 TMEM88Q6PEY1 159 aa13.54□□□□□ -0.24
HLA-DRB1-201ENST00000360004 SYT8Q8NBV8 401 aa13.54□□□□□ -0.24
HLA-DRB1-201ENST00000360004 TRGV4A0A0C4DH28 118 aa13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 ZNF727A8MUV8 499 aa13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 NDUFS6O75380 124 aaKnown RBP13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 P01737 135 aa13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 SRP19P09132 144 aaKnown RBP13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 RPL19P84098 196 aaKnown RBP13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 OR4C5Q8NGB2 326 aa13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 RASL10AQ92737 203 aa13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 C9orf85Q96MD7 179 aa13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 PHLDA3Q9Y5J5 127 aa13.53□□□□□ -0.24
HLA-DRB1-201ENST00000360004 TRBV20OR9-2A0A075B6H5 130 aa13.52□□□□□ -0.25
HLA-DRB1-201ENST00000360004 IGLV2-8P01709 118 aa13.52□□□□□ -0.25
HLA-DRB1-201ENST00000360004 ARMS2P0C7Q2 107 aa13.52□□□□□ -0.25
HLA-DRB1-201ENST00000360004 RNASE3P12724 160 aaKnown RBP13.52□□□□□ -0.25
HLA-DRB1-201ENST00000360004 OR2D3Q8NGH3 330 aa13.52□□□□□ -0.25
HLA-DRB1-201ENST00000360004 C18orf15Q96N68 181 aa13.52□□□□□ -0.25
HLA-DRB1-201ENST00000360004 IL36BQ9NZH7 164 aa13.52□□□□□ -0.25
HLA-DRB1-201ENST00000360004 A0A0J9YY99 117 aa13.51□□□□□ -0.25
HLA-DRB1-201ENST00000360004 XKRY2A2RUG3 117 aa13.51□□□□□ -0.25
HLA-DRB1-201ENST00000360004 NUDT3O95989 172 aa13.51□□□□□ -0.25
HLA-DRB1-201ENST00000360004 RPS20P60866 119 aaKnown RBP13.51□□□□□ -0.25
HLA-DRB1-201ENST00000360004 OCC1Q8TAD7 63 aa13.51□□□□□ -0.25
HLA-DRB1-201ENST00000360004 TRAV26-1A0A087WT03 109 aa13.5□□□□□ -0.25
HLA-DRB1-201ENST00000360004 TRAV4A0A0B4J268 109 aa13.5□□□□□ -0.25
HLA-DRB1-201ENST00000360004 LY6G6CO95867 125 aa13.5□□□□□ -0.25
HLA-DRB1-201ENST00000360004 SFTA3P0C7M3 94 aa13.5□□□□□ -0.25
HLA-DRB1-201ENST00000360004 C15orf53Q8NAA6 179 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms