RNA–Protein interactions for RNA: ENST00000359175.8

SPTSSB-201, Transcript of serine palmitoyltransferase small subunit B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTSSB, Length 3,103 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSB-201ENST00000359175 NDUFA7O95182 113 aa10.22□□□□□ -0.77
SPTSSB-201ENST00000359175 HERVK_113P61574 105 aa10.22□□□□□ -0.77
SPTSSB-201ENST00000359175 TMEM263Q8WUH6 116 aaKnown RBP10.22□□□□□ -0.77
SPTSSB-201ENST00000359175 IGHV4-4A0A075B6R2 117 aa10.21□□□□□ -0.77
SPTSSB-201ENST00000359175 IGHV3-72A0A0B4J1Y9 119 aa10.21□□□□□ -0.78
SPTSSB-201ENST00000359175 IGKV3D-20A0A0C4DH25 116 aa10.21□□□□□ -0.78
SPTSSB-201ENST00000359175 A0A1B0GX51 115 aa10.21□□□□□ -0.78
SPTSSB-201ENST00000359175 NPFFO15130 113 aa10.21□□□□□ -0.78
SPTSSB-201ENST00000359175 ADIPOQQ15848 244 aa10.21□□□□□ -0.78
SPTSSB-201ENST00000359175 PAPPA-AS1Q5QFB9 102 aa10.21□□□□□ -0.78
SPTSSB-201ENST00000359175 CFHR4Q92496 578 aa10.21□□□□□ -0.78
SPTSSB-201ENST00000359175 IGLV3-9A0A075B6K5 115 aa10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 A0A0B4J2C4 111 aa10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 EIF4EBP3O60516 100 aaPredicted RBP10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 TNFAIP6P98066 277 aaPredicted RBP10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 J3KT08 172 aa10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 EBI3Q14213 229 aa10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 C2orf66Q6UXQ4 117 aa10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 POM121L12Q8N7R1 296 aa10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 OOSP1A8MZH6 123 aa10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 HES1Q14469 280 aa10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 SLC50A1Q9BRV3 221 aa10.2□□□□□ -0.78
SPTSSB-201ENST00000359175 IGHV7-4-1A0A0J9YVY3 117 aa10.19□□□□□ -0.78
SPTSSB-201ENST00000359175 CD59P13987 128 aa10.19□□□□□ -0.78
SPTSSB-201ENST00000359175 C3orf22Q8N5N4 141 aa10.19□□□□□ -0.78
SPTSSB-201ENST00000359175 SPANXDQ9BXN6 97 aa10.19□□□□□ -0.78
SPTSSB-201ENST00000359175 A4D1N5 150 aa10.19□□□□□ -0.78
SPTSSB-201ENST00000359175 CRYGDP07320 174 aa10.19□□□□□ -0.78
SPTSSB-201ENST00000359175 ELANEP08246 267 aa10.19□□□□□ -0.78
SPTSSB-201ENST00000359175 SUMO2P61956 95 aaKnown RBP10.19□□□□□ -0.78
SPTSSB-201ENST00000359175 IGHV1-46P01743 117 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 ZNF56Q15929 161 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 C9orf153Q5TBE3 101 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 TMEM101Q96IK0 257 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 SLC25A15Q9Y619 301 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 IGLV4-69A0A075B6H9 119 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 C11orf86A6NJI1 115 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 HERVK_113P63121 156 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 IMUPQ9GZP8 106 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 PRUNE2Q8WUY3 3088 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 DEFB121Q5J5C9 76 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 ZNF474Q6S9Z5 364 aaPredicted RBP10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 AMELXQ99217 191 aa10.18□□□□□ -0.78
SPTSSB-201ENST00000359175 ABCA1O95477 2261 aa10.17□□□□□ -0.78
SPTSSB-201ENST00000359175 DYNAPQ8N1N2 210 aa10.17□□□□□ -0.78
SPTSSB-201ENST00000359175 C11orf21Q9P2W6 132 aa10.17□□□□□ -0.78
SPTSSB-201ENST00000359175 TSPEAR-AS2P59090 65 aa10.17□□□□□ -0.78
SPTSSB-201ENST00000359175 TCF15Q12870 199 aa10.17□□□□□ -0.78
SPTSSB-201ENST00000359175 TRBV30A0A0K0K1B3 111 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 SMAD5-AS1Q9Y6J3 95 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 FAM236AA0A1B0GUQ0 79 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 FAM236BA0A1B0GV22 79 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 RBAKDNA6NC62 111 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 IGFL4Q6B9Z1 124 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 UQCRQO14949 82 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 IGHV4-39P01824 125 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 RPS28P62857 69 aaKnown RBP10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 C3orf36Q3SXR2 165 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 SPANXN1Q5VSR9 72 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 C2orf82Q6UX34 121 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 GFRALQ6UXV0 394 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 LINC00526Q96FQ7 95 aa10.16□□□□□ -0.78
SPTSSB-201ENST00000359175 H3BT86 120 aa10.15□□□□□ -0.78
SPTSSB-201ENST00000359175 CITED2Q99967 270 aaPredicted RBP10.15□□□□□ -0.78
SPTSSB-201ENST00000359175 UBTD1Q9HAC8 227 aa10.15□□□□□ -0.78
SPTSSB-201ENST00000359175 TRGV11A0A075B6L2 103 aa10.15□□□□□ -0.79
SPTSSB-201ENST00000359175 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.15□□□□□ -0.79
SPTSSB-201ENST00000359175 DLX6P56179 175 aa10.15□□□□□ -0.79
SPTSSB-201ENST00000359175 C9orf106Q8NAJ2 232 aa10.15□□□□□ -0.79
SPTSSB-201ENST00000359175 CD3EP07766 207 aa10.14□□□□□ -0.79
SPTSSB-201ENST00000359175 CEMP1Q6PRD7 247 aaPredicted RBP10.14□□□□□ -0.79
SPTSSB-201ENST00000359175 SPANXCQ9NY87 97 aa10.14□□□□□ -0.79
SPTSSB-201ENST00000359175 CELSR3Q9NYQ7 3312 aa10.14□□□□□ -0.79
SPTSSB-201ENST00000359175 H7C2G1 150 aa10.14□□□□□ -0.79
SPTSSB-201ENST00000359175 M0R1B8 84 aa10.14□□□□□ -0.79
SPTSSB-201ENST00000359175 KLK5Q9Y337 293 aaPredicted RBP10.14□□□□□ -0.79
SPTSSB-201ENST00000359175 EYSQ5T1H1 3165 aa10.14□□□□□ -0.79
SPTSSB-201ENST00000359175 RNF223E7ERA6 249 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 H7C423 109 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 TMEM170BQ5T4T1 132 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 IGHV1-69DA0A0B4J2H0 117 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 J3QQQ9 107 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 EMP1P54849 157 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 Q1RN00 199 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 C14orf178Q8N769 122 aaPredicted RBP10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 PRAC2D3DTV9 90 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 TSHBP01222 138 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 OR13C6PQ8NH95 151 aa10.13□□□□□ -0.79
SPTSSB-201ENST00000359175 TNRC18O15417 2968 aaPredicted RBP10.12□□□□□ -0.79
SPTSSB-201ENST00000359175 IGHV1-8P0DP01 117 aa10.12□□□□□ -0.79
SPTSSB-201ENST00000359175 PMVKQ15126 192 aa10.12□□□□□ -0.79
SPTSSB-201ENST00000359175 TMEM219Q86XT9 240 aa10.12□□□□□ -0.79
SPTSSB-201ENST00000359175 IGHV1-3A0A0C4DH29 117 aa10.12□□□□□ -0.79
SPTSSB-201ENST00000359175 TRIAP1O43715 76 aa10.12□□□□□ -0.79
SPTSSB-201ENST00000359175 MFAP4P55083 255 aa10.12□□□□□ -0.79
SPTSSB-201ENST00000359175 M0R381 172 aa10.11□□□□□ -0.79
SPTSSB-201ENST00000359175 LGALS3P17931 250 aaKnown RBP10.11□□□□□ -0.79
SPTSSB-201ENST00000359175 MUSTN1Q8IVN3 82 aa10.11□□□□□ -0.79
SPTSSB-201ENST00000359175 RPL39LQ96EH5 51 aaKnown RBP10.11□□□□□ -0.79
SPTSSB-201ENST00000359175 DUX3Q96PT4 197 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms