RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 SDF2L1Q9HCN8 221 aa10.99□□□□□ -0.65
TPM1-206ENST00000358278 K7EN84 100 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 AZU1P20160 251 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 EMP1P54849 157 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 TMEM241Q24JQ0 296 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 TDRG1Q3Y452 100 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 ZNF493Q6ZR52 646 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 DAZAP1Q96EP5 407 aaKnown RBP10.98□□□□□ -0.65
TPM1-206ENST00000358278 C11orf21Q9P2W6 132 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 TP53TG3Q9ULZ0 132 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 LY96Q9Y6Y9 160 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 TRGV11A0A075B6L2 103 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 A0A0J9YWU9 116 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 TMEM189A5PLL7 270 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 B4DEV8 164 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 RNASE8Q8TDE3 154 aaKnown RBP10.98□□□□□ -0.65
TPM1-206ENST00000358278 C11orf68Q9H3H3 251 aaKnown RBP10.98□□□□□ -0.65
TPM1-206ENST00000358278 NAT8Q9UHE5 227 aa10.98□□□□□ -0.65
TPM1-206ENST00000358278 TYMSP04818 313 aa10.97□□□□□ -0.65
TPM1-206ENST00000358278 LINC01551Q86U37 167 aa10.97□□□□□ -0.65
TPM1-206ENST00000358278 SNURFLB1AK76 121 aa10.96□□□□□ -0.65
TPM1-206ENST00000358278 ZNF415Q09FC8 603 aa10.96□□□□□ -0.65
TPM1-206ENST00000358278 ADIRFQ15847 76 aa10.96□□□□□ -0.65
TPM1-206ENST00000358278 TMSB15BA0A087X1C1 80 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 IGKV3D-20A0A0C4DH25 116 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 GNRH2O43555 120 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 P01737 135 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 LINC01559Q495D7 138 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 MUC4Q99102 2169 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 TMEM218A2RU14 115 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 C19orf71A6NCJ1 209 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 KRBOX1C9JBD0 128 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 RPL23P62829 140 aaKnown RBP10.95□□□□□ -0.66
TPM1-206ENST00000358278 RPL19P84098 196 aaKnown RBP10.95□□□□□ -0.66
TPM1-206ENST00000358278 IBA57Q5T440 356 aaKnown RBP10.95□□□□□ -0.66
TPM1-206ENST00000358278 RNASE7Q9H1E1 156 aaKnown RBP10.95□□□□□ -0.66
TPM1-206ENST00000358278 GSN-AS1Q9NRJ2 163 aa10.95□□□□□ -0.66
TPM1-206ENST00000358278 F8W036 122 aa10.94□□□□□ -0.66
TPM1-206ENST00000358278 S100A4P26447 101 aaKnown RBP10.94□□□□□ -0.66
TPM1-206ENST00000358278 ASIPP42127 132 aa10.94□□□□□ -0.66
TPM1-206ENST00000358278 ERVFC1-1P60608 527 aa10.94□□□□□ -0.66
TPM1-206ENST00000358278 C11orf72Q8NBR9 251 aa10.94□□□□□ -0.66
TPM1-206ENST00000358278 MDFICQ9P1T7 246 aa10.94□□□□□ -0.66
TPM1-206ENST00000358278 TIMM8BQ9Y5J9 83 aaPredicted RBP10.94□□□□□ -0.66
TPM1-206ENST00000358278 IGHV3-16A0A0C4DH30 117 aa10.93□□□□□ -0.66
TPM1-206ENST00000358278 PLAC8L1A1L4L8 177 aa10.93□□□□□ -0.66
TPM1-206ENST00000358278 TCL1AP56279 114 aa10.93□□□□□ -0.66
TPM1-206ENST00000358278 SLC7A5P1Q8MH63 180 aa10.93□□□□□ -0.66
TPM1-206ENST00000358278 OR2D3Q8NGH3 330 aa10.93□□□□□ -0.66
TPM1-206ENST00000358278 NOP10Q9NPE3 64 aaKnown RBP10.93□□□□□ -0.66
TPM1-206ENST00000358278 GRIFINA4D1Z8 144 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 NUDT10Q8NFP7 164 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 ISOC2Q96AB3 205 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 NUDT11Q96G61 164 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 TEX48A0A1B0GUV7 120 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 XKRY2A2RUG3 117 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 ADCYAP1P18509 176 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 FAM222AQ5U5X8 452 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 FAM231DQ6ZW35 169 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 SEC11CQ9BY50 192 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 RPP21Q9H633 154 aaKnown RBP10.92□□□□□ -0.66
TPM1-206ENST00000358278 CELA1Q9UNI1 258 aa10.92□□□□□ -0.66
TPM1-206ENST00000358278 H3BVH4 76 aa10.91□□□□□ -0.66
TPM1-206ENST00000358278 GATCO43716 136 aaKnown RBP10.91□□□□□ -0.66
TPM1-206ENST00000358278 SPART-AS1P0CW21 52 aa10.91□□□□□ -0.66
TPM1-206ENST00000358278 PNRC1Q12796 327 aaPredicted RBP10.91□□□□□ -0.66
TPM1-206ENST00000358278 DAZ2Q13117 558 aaKnown RBP10.91□□□□□ -0.66
TPM1-206ENST00000358278 C15orf54Q8N8G6 183 aa10.91□□□□□ -0.66
TPM1-206ENST00000358278 DKK2Q9UBU2 259 aa10.91□□□□□ -0.66
TPM1-206ENST00000358278 CXorf65A6NEN9 183 aa10.9□□□□□ -0.66
TPM1-206ENST00000358278 LYRM9A8MSI8 78 aa10.9□□□□□ -0.66
TPM1-206ENST00000358278 RPS20P60866 119 aaKnown RBP10.9□□□□□ -0.66
TPM1-206ENST00000358278 DMRTA1Q5VZB9 504 aa10.9□□□□□ -0.66
TPM1-206ENST00000358278 IL17DQ8TAD2 202 aa10.9□□□□□ -0.66
TPM1-206ENST00000358278 SFRP2Q96HF1 295 aa10.9□□□□□ -0.66
TPM1-206ENST00000358278 SPXQ9BT56 116 aa10.9□□□□□ -0.66
TPM1-206ENST00000358278 EDA2RQ9HAV5 297 aa10.9□□□□□ -0.66
TPM1-206ENST00000358278 TRGV1A0A0A0MS02 117 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 CXCL1P09341 107 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 RNASE3P12724 160 aaKnown RBP10.89□□□□□ -0.67
TPM1-206ENST00000358278 NDUFA5Q16718 116 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 C11orf45Q8TAV5 145 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 OSTCQ9NRP0 149 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 IL36BQ9NZH7 164 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 NACAE9PAV3 2078 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 GZMBP10144 247 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 DNLZQ5SXM8 178 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 C9orf85Q96MD7 179 aa10.89□□□□□ -0.67
TPM1-206ENST00000358278 ARMS2P0C7Q2 107 aa10.88□□□□□ -0.67
TPM1-206ENST00000358278 DEFB130BP0DP73 79 aa10.88□□□□□ -0.67
TPM1-206ENST00000358278 DEFB130AP0DP74 79 aa10.88□□□□□ -0.67
TPM1-206ENST00000358278 DAD1P61803 113 aa10.88□□□□□ -0.67
TPM1-206ENST00000358278 Q6ZTI0 123 aa10.88□□□□□ -0.67
TPM1-206ENST00000358278 OR10G8Q8NGN5 311 aa10.88□□□□□ -0.67
TPM1-206ENST00000358278 TPPP3Q9BW30 176 aa10.88□□□□□ -0.67
TPM1-206ENST00000358278 M0R2P5 195 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 SPINK4O60575 86 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 ZNF575Q86XF7 245 aa10.87□□□□□ -0.67
TPM1-206ENST00000358278 MRPL16Q9NX20 251 aaKnown RBP10.87□□□□□ -0.67
TPM1-206ENST00000358278 PHLDA3Q9Y5J5 127 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 311.3 ms