RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 RNF182Q8N6D2 247 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 MRPL53Q96EL3 112 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 LINC01548A6NM66 108 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 SCGB3A1Q96QR1 104 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 DPM3Q9P2X0 92 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 RIF1Q5UIP0 2472 aaKnown RBP9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 CEP250Q9BV73 2442 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 TRAV8-2A0A0B4J237 113 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 ODF3BA8MYP8 253 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 IGHV3-23P01764 117 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 NDUFA11Q86Y39 141 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 Q8N6K4 173 aa9.25□□□□□ -0.93
SMARCAL1-201ENST00000357276 PSMB2P49721 201 aa9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 C9orf47Q6ZRZ4 202 aa9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 PTH2Q96A98 100 aa9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 DYNLRB1Q9NP97 96 aa9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 HIF1ANQ9NWT6 349 aa9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 CLPSL1A2RUU4 121 aa9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 ZNF815PA8K554 130 aa9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 M0QXV9 152 aa9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 SUMO2P61956 95 aaKnown RBP9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 RNF183Q96D59 192 aa9.24□□□□□ -0.93
SMARCAL1-201ENST00000357276 TRBV20-1A0A075B6N2 111 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 TCL1BO95988 128 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 UFC1Q9Y3C8 167 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 SCGB2A1O75556 95 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 Q6ZQT7 251 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 CITED1Q99966 193 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 DMXL1Q9Y485 3027 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 CRYGDP07320 174 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 GATA3P23771 443 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 LYRM7Q5U5X0 104 aa9.23□□□□□ -0.93
SMARCAL1-201ENST00000357276 A0A0J9YY99 117 aa9.22□□□□□ -0.93
SMARCAL1-201ENST00000357276 ZNF688P0C7X2 276 aa9.22□□□□□ -0.93
SMARCAL1-201ENST00000357276 SPANXN1Q5VSR9 72 aa9.22□□□□□ -0.93
SMARCAL1-201ENST00000357276 ONECUT1Q9UBC0 465 aa9.22□□□□□ -0.93
SMARCAL1-201ENST00000357276 M0R381 172 aa9.22□□□□□ -0.93
SMARCAL1-201ENST00000357276 EBI3Q14213 229 aa9.22□□□□□ -0.93
SMARCAL1-201ENST00000357276 C2orf66Q6UXQ4 117 aa9.22□□□□□ -0.93
SMARCAL1-201ENST00000357276 IGLV4-69A0A075B6H9 119 aa9.21□□□□□ -0.93
SMARCAL1-201ENST00000357276 POM121L12Q8N7R1 296 aa9.21□□□□□ -0.93
SMARCAL1-201ENST00000357276 Q8NA96 180 aa9.21□□□□□ -0.93
SMARCAL1-201ENST00000357276 LOC107984156A0A0G2JMH3 177 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 LYNX1G3V0Z9 82 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 IGHV3-30P01768 117 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 CFC1BP0CG36 223 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 CFC1P0CG37 223 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 IGHV3-30-5P0DP03 117 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 LYNX1P0DP58 116 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 ARL17AQ8IVW1 177 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 VKORC1Q9BQB6 163 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 TACC2O95359 2948 aa9.21□□□□□ -0.94
SMARCAL1-201ENST00000357276 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 B9A039 149 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 SRD5A1P18405 259 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 PRR9Q5T870 116 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 CSMD1Q96PZ7 3565 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 LINC01600Q96MT4 127 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 KLK15Q9H2R5 256 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 ROS1P08922 2347 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 BSNQ9UPA5 3926 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 IGHV7-81A0A0B4J1V7 117 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 A8MWV9 139 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 H3BVH4 76 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 TSHBP01222 138 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 NHLRC4P0CG21 123 aaPredicted RBP9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 SRSF9Q13242 221 aaKnown RBP eCLIP9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 SCGB1D4Q6XE38 83 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 C10orf126Q8N4M7 172 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 KLHL30-AS1Q8NEE0 82 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 LENEPQ9Y5L5 61 aa9.2□□□□□ -0.94
SMARCAL1-201ENST00000357276 ANKRD29Q8N6D5 301 aa9.19□□□□□ -0.94
SMARCAL1-201ENST00000357276 SLC25A29Q8N8R3 303 aa9.19□□□□□ -0.94
SMARCAL1-201ENST00000357276 RPL39LQ96EH5 51 aaKnown RBP9.19□□□□□ -0.94
SMARCAL1-201ENST00000357276 AMELXQ99217 191 aa9.19□□□□□ -0.94
SMARCAL1-201ENST00000357276 U3KQE9 123 aa9.19□□□□□ -0.94
SMARCAL1-201ENST00000357276 TMEM262E9PQX1 116 aa9.19□□□□□ -0.94
SMARCAL1-201ENST00000357276 RPL32P62910 135 aaKnown RBP9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 GPHB5Q86YW7 130 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 DPH3P1Q9H4G8 78 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 PKDREJQ9NTG1 2253 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 C11orf86A6NJI1 115 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 HES1Q14469 280 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 SFTA2Q6UW10 78 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 AJUBAQ96IF1 538 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 IGHV1-69DA0A0B4J2H0 117 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 IGHV3-35A0A0C4DH35 117 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 IGIPA6NJ69 53 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 M0R1W7 72 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 ZFAND6Q6FIF0 208 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 FAM110DQ8TAY7 271 aaPredicted RBP9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 KIR2DL4Q99706 377 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 ADGRG4Q8IZF6 3080 aa9.18□□□□□ -0.94
SMARCAL1-201ENST00000357276 MED14OSP0DP75 135 aa9.17□□□□□ -0.94
SMARCAL1-201ENST00000357276 PAPPA-AS1Q5QFB9 102 aa9.17□□□□□ -0.94
SMARCAL1-201ENST00000357276 Q6ZS46 218 aa9.17□□□□□ -0.94
SMARCAL1-201ENST00000357276 PRTN3P24158 256 aa9.17□□□□□ -0.94
SMARCAL1-201ENST00000357276 TSPEAR-AS2P59090 65 aa9.17□□□□□ -0.94
SMARCAL1-201ENST00000357276 GAGE5Q13069 117 aa9.17□□□□□ -0.94
SMARCAL1-201ENST00000357276 GAGE6Q13070 117 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms