RNA–Protein interactions for RNA: ENST00000355766.5

VPS13A-201, Transcript of vacuolar protein sorting 13 homolog A, humanhuman

TSL 3

Gene VPS13A, Length 753 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13A-201ENST00000355766 GNG5P63218 68 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 DEFB136Q30KP8 78 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 SUMO4Q6EEV6 95 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 LCN12Q6JVE5 192 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 C9orf47Q6ZRZ4 202 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 ATP5L2Q7Z4Y8 100 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 EXOC3-AS1Q8N2X6 119 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 FAM24BQ8N5W8 94 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 TSKUQ8WUA8 353 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 FAM210BQ96KR6 192 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 SRD5A3Q9H8P0 318 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 PSG8Q9UQ74 426 aa5.17□□□□□ -1.58
VPS13A-201ENST00000355766 TMA7Q9Y2S6 64 aaKnown RBP5.17□□□□□ -1.58
VPS13A-201ENST00000355766 ABCA13Q86UQ4 5058 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 IGHV4OR15-8A0A075B7B6 117 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 A0A087WW49 117 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 TRAV8-2A0A0B4J237 113 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 TRAV25A0A0B4J276 109 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 IGHV3-35A0A0C4DH35 117 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 A0A1B0GW15 77 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 C2orf70A6NJV1 201 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 A8MWL6 223 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 C1orf196B1AJZ1 125 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 TRIAP1O43715 76 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 P01737 135 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 APOHP02749 345 aaPredicted RBP5.16□□□□□ -1.58
VPS13A-201ENST00000355766 CXCL1P09341 107 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 INSL3P51460 131 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 FOXA3P55318 350 aaPredicted RBP5.16□□□□□ -1.58
VPS13A-201ENST00000355766 RPS20P60866 119 aaKnown RBP5.16□□□□□ -1.58
VPS13A-201ENST00000355766 SNRPD3P62318 126 aaKnown RBP5.16□□□□□ -1.58
VPS13A-201ENST00000355766 FAM162BQ5T6X4 162 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 WDR73Q6P4I2 378 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 GBGT1Q8N5D6 347 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.16□□□□□ -1.58
VPS13A-201ENST00000355766 OR9G4Q8NGQ1 327 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 OR1N2Q8NGR9 330 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 LINC00477Q96M19 166 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 RPP21Q9H633 154 aaKnown RBP5.16□□□□□ -1.58
VPS13A-201ENST00000355766 NAT8BQ9UHF3 227 aa5.16□□□□□ -1.58
VPS13A-201ENST00000355766 PGPEP1LA6NFU8 196 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 ZNF705GA8MUZ8 300 aaPredicted RBP5.15□□□□□ -1.59
VPS13A-201ENST00000355766 M0R3E3 92 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 S100A8P05109 93 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 MGST1P10620 155 aaKnown RBP5.15□□□□□ -1.59
VPS13A-201ENST00000355766 MALP21145 153 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 CBLN1P23435 193 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 ZNF138P52744 262 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 PAFAH1B2P68402 229 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 TMEM78Q5T7P6 136 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 APRG1Q8IVJ8 170 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 OR2K2Q8NGT1 345 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 DCANP1Q8TF63 244 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 DAZAP1Q96EP5 407 aaKnown RBP5.15□□□□□ -1.59
VPS13A-201ENST00000355766 LINC00479Q96M42 142 aa5.15□□□□□ -1.59
VPS13A-201ENST00000355766 TRAV34A0A0B4J273 112 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 A0A1W2PPQ1 181 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 IZUMO1RA6ND01 250 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 PRSS29PA6NIE9 313 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 H3BTX0 84 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 GATCO43716 136 aaKnown RBP5.14□□□□□ -1.59
VPS13A-201ENST00000355766 HLA-DQA1P01909 254 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 CRISP2P16562 243 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 SYNJ2BPP57105 145 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 HIST1H1AQ02539 215 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-201ENST00000355766 SMUG1Q53HV7 270 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 RBPMS2Q6ZRY4 209 aaKnown RBP5.14□□□□□ -1.59
VPS13A-201ENST00000355766 TCF24Q7RTU0 167 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 PRNTQ86SH4 94 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 OR11H1Q8NG94 326 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 OR10J6PQ8NGY7 276 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 SPAG8Q99932 426 aaPredicted RBP5.14□□□□□ -1.59
VPS13A-201ENST00000355766 FAM110AQ9BQ89 295 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 GNB1LQ9BYB4 327 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 RPH3ALQ9UNE2 315 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 URGCP-MRPS24S4R325 110 aa5.14□□□□□ -1.59
VPS13A-201ENST00000355766 DNAH10Q8IVF4 4471 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 IGHV3OR16-8A0A075B7F1 116 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 IGKV2-40A0A087WW87 121 aaPredicted RBP5.13□□□□□ -1.59
VPS13A-201ENST00000355766 TRAV8-1A0A0A6YYK1 113 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 TGIF2-C20orf24A0A0A6YYL0 155 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 K7EQG2 157 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 ZNF207O43670 478 aaKnown RBP5.13□□□□□ -1.59
VPS13A-201ENST00000355766 IGKV2D-40P01614 121 aaPredicted RBP5.13□□□□□ -1.59
VPS13A-201ENST00000355766 IGHV4-30-4P0DP06 118 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 RPS10P46783 165 aaKnown RBP5.13□□□□□ -1.59
VPS13A-201ENST00000355766 CMC4P56277 68 aaPredicted RBP5.13□□□□□ -1.59
VPS13A-201ENST00000355766 OR5I1Q13606 314 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 ACTL10Q5JWF8 245 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 FOXI2Q6ZQN5 318 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 ZNF738Q8NE65 137 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 ZC2HC1AQ96GY0 325 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 FAM19A4Q96LR4 140 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 CNFNQ9BYD5 112 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 RNASE7Q9H1E1 156 aaKnown RBP5.13□□□□□ -1.59
VPS13A-201ENST00000355766 MS4A6AQ9H2W1 248 aa5.13□□□□□ -1.59
VPS13A-201ENST00000355766 IGHV3OR16-13A0A075B7E8 117 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 IGHV3-74A0A0B4J1X5 117 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 IGHV3-66A0A0C4DH42 116 aa5.12□□□□□ -1.59
VPS13A-201ENST00000355766 A0A1B0GXF2 115 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 262.6 ms