RNA–Protein interactions for RNA: ENST00000354757.4

PCDHB11-201, Transcript of protocadherin beta 11, humanhuman

APPRIS P1 BASIC

Gene PCDHB11, Length 4,198 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11-201ENST00000354757 CDKN1BP46527 198 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 PET117Q6UWS5 81 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 UNQ9165/PRO28630Q6UXU0 137 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 CFHR4Q92496 578 aa9.61□□□□□ -0.87
PCDHB11-201ENST00000354757 NDUFA3O95167 84 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 DSCAML1Q8TD84 2053 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 EIF4EBP1Q13541 118 aaPredicted RBP9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 SCGB3A1Q96QR1 104 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 PTPRBP23467 1997 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 DMXL2Q8TDJ6 3036 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 PRSS2P07478 247 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 CFHR3Q02985 330 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 DEFB121Q5J5C9 76 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 GTSF1LQ9H1H1 148 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 USP24Q9UPU5 2620 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 IGHV7-4-1A0A0J9YVY3 117 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 ODF3BA8MYP8 253 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 SYS1-DBNDD2H3BUS1 97 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 ELANEP08246 267 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 DEFB130BP0DP73 79 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 DEFB130AP0DP74 79 aa9.6□□□□□ -0.87
PCDHB11-201ENST00000354757 FAM167A-AS1Q96KT0 104 aa9.59□□□□□ -0.87
PCDHB11-201ENST00000354757 HERVK_113P61574 105 aa9.59□□□□□ -0.87
PCDHB11-201ENST00000354757 AGPAT4-IT1Q9H0P7 198 aa9.59□□□□□ -0.87
PCDHB11-201ENST00000354757 TP73-AS1Q9UF72 201 aa9.59□□□□□ -0.87
PCDHB11-201ENST00000354757 CIDEAO60543 219 aa9.59□□□□□ -0.87
PCDHB11-201ENST00000354757 AVPP01185 164 aa9.59□□□□□ -0.87
PCDHB11-201ENST00000354757 FOXE3Q13461 319 aa9.59□□□□□ -0.87
PCDHB11-201ENST00000354757 TRGV4A0A0C4DH28 118 aa9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 ZNF876PQ49A33 203 aa9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 SMPXQ9UHP9 88 aa9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 IGHV3-16A0A0C4DH30 117 aa9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 GP9P14770 177 aa9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 APRG1Q8IVJ8 170 aa9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 IGKV1D-37A0A075B6S9 117 aa9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 PRAC2D3DTV9 90 aa9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 SCGB1C2P0DMR2 95 aa9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 MRPL27Q9P0M9 148 aaKnown RBP9.58□□□□□ -0.88
PCDHB11-201ENST00000354757 IGHV4OR15-8A0A075B7B6 117 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 A0A087WW49 117 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 LY96Q9Y6Y9 160 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 FAM231BA6NCW3 169 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 BUB3O43684 328 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 IGHV4-31P0DP07 118 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 Q6ZS46 218 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 TNRC6BQ9UPQ9 1833 aaKnown RBP9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 TRAV26-2A0A0B4J265 109 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 H7C2G1 150 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 CACNG7P62955 275 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 ANXA2RQ3ZCQ2 193 aa9.57□□□□□ -0.88
PCDHB11-201ENST00000354757 H7C1H1 209 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 CCL24O00175 119 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 IGHG2P01859 326 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 TMEM14CQ9P0S9 112 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 CRYGCP07315 174 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 PHLDA1Q8WV24 401 aaPredicted RBP9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 C11orf52Q96A22 123 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 GEMIN7Q9H840 131 aaKnown RBP9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 SMIM13P0DJ93 91 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 SUMO2P61956 95 aaKnown RBP9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 C19orf54Q5BKX5 351 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 SFTA2Q6UW10 78 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 TP53TG3Q9ULZ0 132 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 A0A1B0GV72 72 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 A0A1B0GW15 77 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 RBX1P62877 108 aa9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 LOXL1Q08397 574 aaPredicted RBP9.56□□□□□ -0.88
PCDHB11-201ENST00000354757 LGALS1P09382 135 aaKnown RBP9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 WIPF2Q8TF74 440 aaPredicted RBP9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 RAI1Q7Z5J4 1906 aaPredicted RBP9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 CD5LO43866 347 aa9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 ATP5L2Q7Z4Y8 100 aa9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 SMR3AQ99954 134 aa9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 NHP2Q9NX24 153 aaKnown RBP9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 TRGV11A0A075B6L2 103 aa9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 LOC107984156A0A0G2JMH3 177 aa9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 A6NDX4 124 aa9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 CRXO43186 299 aaPredicted RBP9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 PRSS57Q6UWY2 283 aa9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 ARL17AQ8IVW1 177 aa9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 TOMM7Q9P0U1 55 aa9.55□□□□□ -0.88
PCDHB11-201ENST00000354757 IGHV3-64A0A075B6Q5 118 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 IFI27P40305 119 aaPredicted RBP9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 BVES-AS1Q5T3Y7 98 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 ZNF503Q96F45 646 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 GNRH2O43555 120 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 LINC00173Q6ZV60 143 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 NEGR1Q7Z3B1 354 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 TMEM190Q8WZ59 177 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 CCDC140Q96MF4 163 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 MS4A6AQ9H2W1 248 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 ATRQ13535 2644 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 LY6LH3BQJ8 138 aa9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 TNFRSF13BO14836 293 aaPredicted RBP9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 EGR2P11161 476 aaPredicted RBP9.54□□□□□ -0.88
PCDHB11-201ENST00000354757 TEP1Q99973 2627 aaKnown RBP9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 HBDP02042 147 aa9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 CITED2Q99967 270 aaPredicted RBP9.53□□□□□ -0.88
PCDHB11-201ENST00000354757 DNAJC9-AS1A6NH13 148 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms