RNA–Protein interactions for RNA: ENST00000354674.4

SYNE1-203, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 3,154 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-203ENST00000354674 GAGE2DQ9UEU5 116 aa7.86□□□□□ -1.15
SYNE1-203ENST00000354674 NDUFV3P56181 108 aaKnown RBP7.86□□□□□ -1.15
SYNE1-203ENST00000354674 PRCDQ00LT1 54 aa7.86□□□□□ -1.15
SYNE1-203ENST00000354674 MAPKAPK5-AS1Q8N8E1 139 aa7.86□□□□□ -1.15
SYNE1-203ENST00000354674 WIPF2Q8TF74 440 aaPredicted RBP7.86□□□□□ -1.15
SYNE1-203ENST00000354674 NPIPB3Q92617 1050 aa7.86□□□□□ -1.15
SYNE1-203ENST00000354674 DPF1Q92782 380 aa7.86□□□□□ -1.15
SYNE1-203ENST00000354674 CARD19Q96LW7 228 aa7.86□□□□□ -1.15
SYNE1-203ENST00000354674 TMEM167BQ9NRX6 74 aa7.86□□□□□ -1.15
SYNE1-203ENST00000354674 CGB1A6NKQ9 187 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 PEX7O00628 323 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 SSBP2P81877 361 aaPredicted RBP7.85□□□□□ -1.15
SYNE1-203ENST00000354674 PRO0461Q9UI25 63 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 A0A1B0GXF2 115 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 PGPA6NDG6 321 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 NBR2O15453 112 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 SIGLEC8Q9NYZ4 499 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 CELSR1Q9NYQ6 3014 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 A0A096LNJ9 63 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 IGHV3-21A0A0B4J1V1 117 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 TRAV8-2A0A0B4J237 113 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 D6R8Y8 96 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 PPP1R27Q86WC6 154 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 CEND1Q8N111 149 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 PIFOQ8TCI5 191 aa7.85□□□□□ -1.15
SYNE1-203ENST00000354674 RPP21Q9H633 154 aaKnown RBP7.85□□□□□ -1.15
SYNE1-203ENST00000354674 MED13LQ71F56 2210 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 IGHV3OR16-10A0A075B7F0 116 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 A0A087WX48 190 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 E7EUB6 86 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 APELAP0DMC3 54 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 BRD3OSQ6XYD6 125 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 C9orf139Q6ZV77 190 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 SRSF12Q8WXF0 261 aaKnown RBP7.84□□□□□ -1.15
SYNE1-203ENST00000354674 SOX21Q9Y651 276 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-203ENST00000354674 MAP1AP78559 2803 aaPredicted RBP7.84□□□□□ -1.15
SYNE1-203ENST00000354674 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.84□□□□□ -1.15
SYNE1-203ENST00000354674 ITPR2Q14571 2701 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 H7C2G1 150 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 ORM2P19652 201 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 FAM162BQ5T6X4 162 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 ZC2HC1BQ5TFG8 222 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 IFI27L1Q96BM0 104 aa7.84□□□□□ -1.15
SYNE1-203ENST00000354674 FBXL15Q9H469 300 aa7.83□□□□□ -1.16
SYNE1-203ENST00000354674 PRNTQ86SH4 94 aa7.83□□□□□ -1.16
SYNE1-203ENST00000354674 AMN1Q8IY45 258 aa7.83□□□□□ -1.16
SYNE1-203ENST00000354674 CHCHD5Q9BSY4 110 aa7.83□□□□□ -1.16
SYNE1-203ENST00000354674 ENY2Q9NPA8 101 aa7.83□□□□□ -1.16
SYNE1-203ENST00000354674 PRSS46E5RG02 174 aa7.83□□□□□ -1.16
SYNE1-203ENST00000354674 SNCGO76070 127 aa7.83□□□□□ -1.16
SYNE1-203ENST00000354674 ATP5IP56385 69 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-203ENST00000354674 KRTAP1-1Q07627 177 aa7.83□□□□□ -1.16
SYNE1-203ENST00000354674 KLK5Q9Y337 293 aaPredicted RBP7.83□□□□□ -1.16
SYNE1-203ENST00000354674 WNK2Q9Y3S1 2297 aa7.83□□□□□ -1.16
SYNE1-203ENST00000354674 TMEM213A2RRL7 107 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 LINC01549A6NIU2 74 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 C8orf88P0DMB2 117 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 HES1Q14469 280 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 PVRIGQ6DKI7 326 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 DEFB104AQ8WTQ1 72 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 ZFHX3Q15911 3703 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 C10orf55Q5SWW7 151 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 RBPMS2Q6ZRY4 209 aaKnown RBP7.82□□□□□ -1.16
SYNE1-203ENST00000354674 Q8N9W7 124 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 ZNF502Q8TBZ5 544 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 PAXXQ9BUH6 204 aa7.82□□□□□ -1.16
SYNE1-203ENST00000354674 TEX22C9J3V5 150 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 WT1-ASQ06250 92 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 RRN3P1Q2M238 152 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 C2orf83Q53S99 150 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 ZNF329Q86UD4 541 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 ZANQ9Y493 2812 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 LINC00694P0DN24 101 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 IFITM1P13164 125 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 RASL11AQ6T310 242 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 SLC25A33Q9BSK2 321 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 A4D1N5 150 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 COX7A2P2O60397 106 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 GAS8-AS1O95177 125 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 SCGB1C2P0DMR2 95 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 RNASE2P10153 161 aaKnown RBP7.81□□□□□ -1.16
SYNE1-203ENST00000354674 HLA-DRB4P13762 266 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 RPL27AP46776 148 aaKnown RBP7.81□□□□□ -1.16
SYNE1-203ENST00000354674 PRR20EP86478 221 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 PRR20CP86479 221 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 PRR20DP86480 221 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 PRR20BP86481 221 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 PRR20AP86496 221 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 SLC25A2Q9BXI2 301 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 CSDC2Q9Y534 153 aaKnown RBP7.81□□□□□ -1.16
SYNE1-203ENST00000354674 HLA-DRB4X5D2U9 266 aa7.81□□□□□ -1.16
SYNE1-203ENST00000354674 ITPR3Q14573 2671 aa7.8□□□□□ -1.16
SYNE1-203ENST00000354674 FASNP49327 2511 aaKnown RBP7.8□□□□□ -1.16
SYNE1-203ENST00000354674 A6NDX4 124 aa7.8□□□□□ -1.16
SYNE1-203ENST00000354674 PLGLAQ15195 96 aa7.8□□□□□ -1.16
SYNE1-203ENST00000354674 IL4P05112 153 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 ERHP84090 104 aaKnown RBP7.79□□□□□ -1.16
SYNE1-203ENST00000354674 CFAP126Q5VTH2 177 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 ANKRD29Q8N6D5 301 aa7.79□□□□□ -1.16
SYNE1-203ENST00000354674 C5orf56Q8N8D9 126 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms