RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 POLQO75417 2590 aa14.89□□□□□ -0.03
COL13A1-201ENST00000354547 USP9XQ93008 2570 aaPredicted RBP14.89□□□□□ -0.03
COL13A1-201ENST00000354547 CACNA1AO00555 2505 aa14.89□□□□□ -0.03
COL13A1-201ENST00000354547 CREBBPQ92793 2442 aa14.89□□□□□ -0.03
COL13A1-201ENST00000354547 TMEM8BA6NDV4 472 aa14.88□□□□□ -0.03
COL13A1-201ENST00000354547 SEC11AP67812 179 aa14.88□□□□□ -0.03
COL13A1-201ENST00000354547 DPF1Q92782 380 aa14.88□□□□□ -0.03
COL13A1-201ENST00000354547 PPP1R14DQ9NXH3 145 aa14.88□□□□□ -0.03
COL13A1-201ENST00000354547 RNASE4P34096 147 aaKnown RBP14.88□□□□□ -0.03
COL13A1-201ENST00000354547 SORL1Q92673 2214 aa14.88□□□□□ -0.03
COL13A1-201ENST00000354547 FAM223BA6NKX1 122 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 K7EMI3 77 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 IGKCP01834 107 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 RBX1P62877 108 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 ZC2HC1BQ5TFG8 222 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 GPHB5Q86YW7 130 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 FAM223AQ8IWN6 122 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 NRACQ8N912 160 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 PCP4P48539 62 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 OR10J6PQ8NGY7 276 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 HHLA3Q9XRX5 114 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 EDN2P20800 178 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 GCSHP23434 173 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 KLK9Q2XQG4 91 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 ADAMTSL5Q6ZMM2 481 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 C14orf178Q8N769 122 aaPredicted RBP14.87□□□□□ -0.03
COL13A1-201ENST00000354547 MYOZ3Q8TDC0 251 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 KLK9Q9UKQ9 250 aa14.87□□□□□ -0.03
COL13A1-201ENST00000354547 IGLV2-18A0A075B6J9 118 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 A6NDN8 102 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 GAGE10A6NGK3 116 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 LAGE3Q14657 143 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 C9orf139Q6ZV77 190 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 OR9G4Q8NGQ1 327 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 CCL19Q99731 98 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 PIMREGQ9BSJ6 248 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 MRPL35Q9NZE8 188 aaKnown RBP14.86□□□□□ -0.03
COL13A1-201ENST00000354547 HSD52Q0P140 79 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 OR4X2Q8NGF9 303 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 ZANQ9Y493 2812 aa14.86□□□□□ -0.03
COL13A1-201ENST00000354547 MGPP08493 103 aa14.85□□□□□ -0.03
COL13A1-201ENST00000354547 JMJD8Q96S16 334 aa14.85□□□□□ -0.03
COL13A1-201ENST00000354547 GAGE12BA1L429 117 aa14.85□□□□□ -0.03
COL13A1-201ENST00000354547 GNRH2O43555 120 aa14.85□□□□□ -0.03
COL13A1-201ENST00000354547 MRPL53Q96EL3 112 aaKnown RBP14.85□□□□□ -0.03
COL13A1-201ENST00000354547 CST9LQ9H4G1 147 aa14.85□□□□□ -0.03
COL13A1-201ENST00000354547 ATP5J2P56134 94 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 TMEM95Q3KNT9 176 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 PIEZO1Q92508 2521 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 IGHV4-30-2A0A087WSY4 118 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 ANXA2RQ3ZCQ2 193 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 C19orf54Q5BKX5 351 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 ZFAND2AQ8N6M9 145 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 RPL39LQ96EH5 51 aaKnown RBP14.84□□□□□ -0.03
COL13A1-201ENST00000354547 PHLDA3Q9Y5J5 127 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 DPM2O94777 84 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 NPFFR1Q9GZQ6 430 aa14.84□□□□□ -0.03
COL13A1-201ENST00000354547 FAM208BQ5VWN6 2430 aa14.83□□□□□ -0.04
COL13A1-201ENST00000354547 RHPN1-AS1Q9BWJ2 59 aa14.83□□□□□ -0.04
COL13A1-201ENST00000354547 ACACBO00763 2458 aa14.83□□□□□ -0.04
COL13A1-201ENST00000354547 NRGNQ92686 78 aa14.82□□□□□ -0.04
COL13A1-201ENST00000354547 A0A0G2JLM5 398 aa14.82□□□□□ -0.04
COL13A1-201ENST00000354547 NDUFA4O00483 81 aa14.82□□□□□ -0.04
COL13A1-201ENST00000354547 LINC01546A6NGU7 62 aa14.82□□□□□ -0.04
COL13A1-201ENST00000354547 C9orf118A6NHY6 69 aa14.81□□□□□ -0.04
COL13A1-201ENST00000354547 SRSF1Q07955 248 aaKnown RBP eCLIP14.81□□□□□ -0.04
COL13A1-201ENST00000354547 LINC00477Q96M19 166 aa14.81□□□□□ -0.04
COL13A1-201ENST00000354547 TRAV21A0A0B4J279 112 aa14.81□□□□□ -0.04
COL13A1-201ENST00000354547 H3BRM9 83 aa14.81□□□□□ -0.04
COL13A1-201ENST00000354547 ATP5LO75964 103 aa14.81□□□□□ -0.04
COL13A1-201ENST00000354547 FXYD2P54710 66 aa14.81□□□□□ -0.04
COL13A1-201ENST00000354547 CLEC2AQ6UVW9 174 aa14.81□□□□□ -0.04
COL13A1-201ENST00000354547 ZFYVE26Q68DK2 2539 aa14.81□□□□□ -0.04
COL13A1-201ENST00000354547 K7ERJ3 54 aa14.8□□□□□ -0.04
COL13A1-201ENST00000354547 ASIPP42127 132 aa14.8□□□□□ -0.04
COL13A1-201ENST00000354547 NEGR1Q7Z3B1 354 aa14.8□□□□□ -0.04
COL13A1-201ENST00000354547 C10orf105Q8TEF2 133 aa14.8□□□□□ -0.04
COL13A1-201ENST00000354547 ZMAT4Q9H898 229 aa14.8□□□□□ -0.04
COL13A1-201ENST00000354547 PRORYQ9H606 182 aa14.8□□□□□ -0.04
COL13A1-201ENST00000354547 CHAC1Q9BUX1 264 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 SIVA1O15304 175 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 AVPP01185 164 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 IGHG2P01859 326 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 OCIAD2Q56VL3 154 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 SMIM2Q9BVW6 85 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 MEGF9Q9H1U4 602 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 IGSF10Q6WRI0 2623 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 TRBV25-1A0A075B6N4 114 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 VPS25Q9BRG1 176 aa14.79□□□□□ -0.04
COL13A1-201ENST00000354547 SOCS3O14543 225 aa14.78□□□□□ -0.04
COL13A1-201ENST00000354547 OVOL1O14753 267 aa14.78□□□□□ -0.04
COL13A1-201ENST00000354547 MAPKAPK5-AS1Q8N8E1 139 aa14.78□□□□□ -0.04
COL13A1-201ENST00000354547 RASL10AQ92737 203 aa14.78□□□□□ -0.04
COL13A1-201ENST00000354547 DOPEY1Q5JWR5 2465 aa14.78□□□□□ -0.04
COL13A1-201ENST00000354547 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.78□□□□□ -0.04
COL13A1-201ENST00000354547 IGKV3-20P01619 116 aa14.78□□□□□ -0.04
COL13A1-201ENST00000354547 C10orf99Q6UWK7 81 aa14.77□□□□□ -0.04
COL13A1-201ENST00000354547 SCGB3A1Q96QR1 104 aa14.77□□□□□ -0.04
COL13A1-201ENST00000354547 AGRNO00468 2067 aa14.77□□□□□ -0.04
COL13A1-201ENST00000354547 IGHV4-4A0A075B6R2 117 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms