RNA–Protein interactions for RNA: ENST00000351808.9

IFT88-202, Transcript of intraflagellar transport 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IFT88, Length 2,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-202ENST00000351808 TRIOBPQ9H2D6 2365 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 TRGV11A0A075B6L2 103 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 NDUFA7O95182 113 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 HERVK_113P63121 156 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 ERCC8Q13216 396 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 CEMP1Q6PRD7 247 aaPredicted RBP10.19□□□□□ -0.78
IFT88-202ENST00000351808 IL17RELQ6ZVW7 336 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 SLC25A29Q8N8R3 303 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 SMIM2Q9BVW6 85 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 SPRR3Q9UBC9 169 aa10.19□□□□□ -0.78
IFT88-202ENST00000351808 IGHV1-18A0A0C4DH31 117 aa10.18□□□□□ -0.78
IFT88-202ENST00000351808 PDE6HQ13956 83 aa10.18□□□□□ -0.78
IFT88-202ENST00000351808 ATXN8Q156A1 80 aa10.18□□□□□ -0.78
IFT88-202ENST00000351808 Q1RN00 199 aa10.18□□□□□ -0.78
IFT88-202ENST00000351808 Q6ZT83 130 aa10.18□□□□□ -0.78
IFT88-202ENST00000351808 CFHR4Q92496 578 aa10.18□□□□□ -0.78
IFT88-202ENST00000351808 RNF7Q9UBF6 113 aa10.18□□□□□ -0.78
IFT88-202ENST00000351808 M0R2P5 195 aa10.18□□□□□ -0.78
IFT88-202ENST00000351808 ZNF474Q6S9Z5 364 aaPredicted RBP10.18□□□□□ -0.78
IFT88-202ENST00000351808 TRBV10-2A0A0K0K1G8 114 aa10.17□□□□□ -0.78
IFT88-202ENST00000351808 C11orf86A6NJI1 115 aa10.17□□□□□ -0.78
IFT88-202ENST00000351808 TSPEAR-AS2P59090 65 aa10.17□□□□□ -0.78
IFT88-202ENST00000351808 TMEM30BQ3MIR4 351 aa10.17□□□□□ -0.78
IFT88-202ENST00000351808 ZFHX4Q86UP3 3567 aa10.17□□□□□ -0.78
IFT88-202ENST00000351808 C2orf82Q6UX34 121 aa10.17□□□□□ -0.78
IFT88-202ENST00000351808 C2orf66Q6UXQ4 117 aa10.17□□□□□ -0.78
IFT88-202ENST00000351808 C14orf178Q8N769 122 aaPredicted RBP10.17□□□□□ -0.78
IFT88-202ENST00000351808 TEX22C9J3V5 150 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 P0DMU3 169 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 FAM231AP0DMU4 169 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 FAM231CP0DMU5 169 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 LY6DQ14210 128 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 ORMDL2Q53FV1 153 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 TMEM263Q8WUH6 116 aaKnown RBP10.16□□□□□ -0.78
IFT88-202ENST00000351808 SIGLEC9Q9Y336 463 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 MALRD1Q5VYJ5 2156 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 IGKV3D-20A0A0C4DH25 116 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 PMVKQ15126 192 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 C3orf22Q8N5N4 141 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 ROS1P08922 2347 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 TRBV7-7A0A0K0K1E9 115 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 RBAKDNA6NC62 111 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 J3KT08 172 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 CD3EP07766 207 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 HERVK_113P61574 105 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 SRSF2Q01130 221 aaKnown RBP10.16□□□□□ -0.78
IFT88-202ENST00000351808 PMS2CLQ68D20 193 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 EDA2RQ9HAV5 297 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 C11orf21Q9P2W6 132 aa10.16□□□□□ -0.78
IFT88-202ENST00000351808 ZNF22P17026 224 aaPredicted RBP10.15□□□□□ -0.78
IFT88-202ENST00000351808 TMEM101Q96IK0 257 aa10.15□□□□□ -0.78
IFT88-202ENST00000351808 K7EIM0 57 aa10.15□□□□□ -0.79
IFT88-202ENST00000351808 CFIP05156 583 aa10.15□□□□□ -0.79
IFT88-202ENST00000351808 ZNF672Q499Z4 452 aaPredicted RBP10.15□□□□□ -0.79
IFT88-202ENST00000351808 SAP25Q8TEE9 199 aa10.15□□□□□ -0.79
IFT88-202ENST00000351808 KALRNO60229 2985 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 TRGV5A0A0B4J1U4 118 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 WIPF1O43516 503 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 CRYGDP07320 174 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 TMEM200BQ69YZ2 307 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 LRRC75A-AS1Q8N1F1 130 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 POM121L12Q8N7R1 296 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 WNK2Q9Y3S1 2297 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 EBI3Q14213 229 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 SPANXN1Q5VSR9 72 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 DYNAPQ8N1N2 210 aa10.14□□□□□ -0.79
IFT88-202ENST00000351808 IGLV1-44P01699 117 aa10.13□□□□□ -0.79
IFT88-202ENST00000351808 PRAC2D3DTV9 90 aa10.13□□□□□ -0.79
IFT88-202ENST00000351808 SUMO2P61956 95 aaKnown RBP10.13□□□□□ -0.79
IFT88-202ENST00000351808 DEFB104AQ8WTQ1 72 aa10.13□□□□□ -0.79
IFT88-202ENST00000351808 RPL39LQ96EH5 51 aaKnown RBP10.13□□□□□ -0.79
IFT88-202ENST00000351808 IGLV4-69A0A075B6H9 119 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 H7C423 109 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 TMEM170BQ5T4T1 132 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 TPRP12270 2363 aaKnown RBP10.12□□□□□ -0.79
IFT88-202ENST00000351808 SPRY2O43597 315 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 MUSTN1Q8IVN3 82 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 LINC01600Q96MT4 127 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 IGHV7-4-1A0A0J9YVY3 117 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 UQCRQO14949 82 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 TRIAP1O43715 76 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 CRYGBP07316 175 aa10.12□□□□□ -0.79
IFT88-202ENST00000351808 TNFAIP6P98066 277 aaPredicted RBP10.12□□□□□ -0.79
IFT88-202ENST00000351808 PRB3Q04118 309 aaPredicted RBP10.12□□□□□ -0.79
IFT88-202ENST00000351808 AMELXQ99217 191 aa10.11□□□□□ -0.79
IFT88-202ENST00000351808 TNRC18O15417 2968 aaPredicted RBP10.11□□□□□ -0.79
IFT88-202ENST00000351808 DKK4Q9UBT3 224 aa10.11□□□□□ -0.79
IFT88-202ENST00000351808 SMG1Q96Q15 3661 aaKnown RBP10.1□□□□□ -0.79
IFT88-202ENST00000351808 A0A0B4J2C4 111 aa10.1□□□□□ -0.79
IFT88-202ENST00000351808 DLX1P56177 255 aa10.1□□□□□ -0.79
IFT88-202ENST00000351808 LINC00526Q96FQ7 95 aa10.1□□□□□ -0.79
IFT88-202ENST00000351808 LINC00527Q9UJ94 153 aa10.1□□□□□ -0.79
IFT88-202ENST00000351808 SMAD5-AS1Q9Y6J3 95 aa10.1□□□□□ -0.79
IFT88-202ENST00000351808 ARHGAP32A7KAX9 2087 aa10.1□□□□□ -0.79
IFT88-202ENST00000351808 J3QQQ9 107 aa10.1□□□□□ -0.79
IFT88-202ENST00000351808 IGHV3OR16-8A0A075B7F1 116 aa10.09□□□□□ -0.79
IFT88-202ENST00000351808 FAM240AA0A1B0GVK7 77 aa10.09□□□□□ -0.79
IFT88-202ENST00000351808 A0A1B0GX51 115 aa10.09□□□□□ -0.79
IFT88-202ENST00000351808 TSHBP01222 138 aa10.09□□□□□ -0.79
IFT88-202ENST00000351808 GATA4P43694 442 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms