RNA–Protein interactions for RNA: ENST00000348547.6

ERGIC3-202, Transcript of ERGIC and golgi 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ERGIC3, Length 1,359 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-202ENST00000348547 TRAV21A0A0B4J279 112 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 TMEM218A2RU14 115 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 KRBOX1C9JBD0 128 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 M0R036 132 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 HTN1P15515 57 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 RPL23P62829 140 aaKnown RBP9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 SOHLH1Q5JUK2 328 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 FAM162BQ5T6X4 162 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 TMEM256Q8N2U0 113 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 NIPSNAP3BQ9BS92 247 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 TMEM208Q9BTX3 173 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 RNASE7Q9H1E1 156 aaKnown RBP9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 MDFICQ9P1T7 246 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 NAGKQ9UJ70 344 aa9.12□□□□□ -0.95
ERGIC3-202ENST00000348547 PLECQ15149 4684 aaKnown RBP9.11□□□□□ -0.95
ERGIC3-202ENST00000348547 IGHV3-16A0A0C4DH30 117 aa9.11□□□□□ -0.95
ERGIC3-202ENST00000348547 TYMSP04818 313 aa9.11□□□□□ -0.95
ERGIC3-202ENST00000348547 MGST1P10620 155 aaKnown RBP9.11□□□□□ -0.95
ERGIC3-202ENST00000348547 UQCC3Q6UW78 93 aa9.11□□□□□ -0.95
ERGIC3-202ENST00000348547 PYGO2Q9BRQ0 406 aa9.11□□□□□ -0.95
ERGIC3-202ENST00000348547 EDA2RQ9HAV5 297 aa9.11□□□□□ -0.95
ERGIC3-202ENST00000348547 TMSB15BA0A087X1C1 80 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 A0A0J9YWU9 116 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 FABP5P3A8MUU1 101 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 GZMBP10144 247 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 LINC01559Q495D7 138 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 C10orf91Q5T1B1 145 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 SMIM12Q96EX1 92 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 SDF2L1Q9HCN8 221 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 GSN-AS1Q9NRJ2 163 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 LY96Q9Y6Y9 160 aa9.1□□□□□ -0.95
ERGIC3-202ENST00000348547 GRIFINA4D1Z8 144 aa9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 NHLRC4P0CG21 123 aaPredicted RBP9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 RNASE3P12724 160 aaKnown RBP9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 MIFP14174 115 aa9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 TMEM241Q24JQ0 296 aa9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 RRN3P1Q2M238 152 aa9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 FAM74A3Q4VXF1 159 aa9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 NUDT10Q8NFP7 164 aa9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 ISOC2Q96AB3 205 aa9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 NUDT11Q96G61 164 aa9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 C11orf68Q9H3H3 251 aaKnown RBP9.09□□□□□ -0.95
ERGIC3-202ENST00000348547 SMIM9A6NGZ8 99 aa9.08□□□□□ -0.96
ERGIC3-202ENST00000348547 CBY3A6NI87 242 aa9.08□□□□□ -0.96
ERGIC3-202ENST00000348547 ORM1P02763 201 aa9.08□□□□□ -0.96
ERGIC3-202ENST00000348547 EMP1P54849 157 aa9.08□□□□□ -0.96
ERGIC3-202ENST00000348547 TMEM263Q8WUH6 116 aaKnown RBP9.08□□□□□ -0.96
ERGIC3-202ENST00000348547 NAT8Q9UHE5 227 aa9.08□□□□□ -0.96
ERGIC3-202ENST00000348547 U3KQK5 164 aa9.08□□□□□ -0.96
ERGIC3-202ENST00000348547 B4DEV8 164 aa9.07□□□□□ -0.96
ERGIC3-202ENST00000348547 ADIRFQ15847 76 aa9.07□□□□□ -0.96
ERGIC3-202ENST00000348547 FAM159AQ6UWV7 190 aa9.07□□□□□ -0.96
ERGIC3-202ENST00000348547 C9orf85Q96MD7 179 aa9.07□□□□□ -0.96
ERGIC3-202ENST00000348547 ZMAT4Q9H898 229 aa9.07□□□□□ -0.96
ERGIC3-202ENST00000348547 TCL1AP56279 114 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 DNLZQ5SXM8 178 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 Q6ZTI0 123 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 FAM231DQ6ZW35 169 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 LINC00612Q8N6U2 182 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 GTSF1Q8WW33 167 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 SCRT2Q9NQ03 307 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 DKK2Q9UBU2 259 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 CARHSP1Q9Y2V2 147 aaKnown RBP9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 V9GYV3 84 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 LYSTQ99698 3801 aa9.06□□□□□ -0.96
ERGIC3-202ENST00000348547 H3BVH4 76 aa9.05□□□□□ -0.96
ERGIC3-202ENST00000348547 IGLC6P0CF74 106 aa9.05□□□□□ -0.96
ERGIC3-202ENST00000348547 FAM222AQ5U5X8 452 aa9.05□□□□□ -0.96
ERGIC3-202ENST00000348547 OR2D3Q8NGH3 330 aa9.05□□□□□ -0.96
ERGIC3-202ENST00000348547 C16orf74Q96GX8 76 aa9.05□□□□□ -0.96
ERGIC3-202ENST00000348547 SEC11CQ9BY50 192 aa9.05□□□□□ -0.96
ERGIC3-202ENST00000348547 NOP10Q9NPE3 64 aaKnown RBP9.05□□□□□ -0.96
ERGIC3-202ENST00000348547 DNAH1Q9P2D7 4330 aa9.05□□□□□ -0.96
ERGIC3-202ENST00000348547 TMEM189A5PLL7 270 aa9.04□□□□□ -0.96
ERGIC3-202ENST00000348547 F8W036 122 aa9.04□□□□□ -0.96
ERGIC3-202ENST00000348547 DAZ2Q13117 558 aaKnown RBP9.04□□□□□ -0.96
ERGIC3-202ENST00000348547 IBA57Q5T440 356 aaKnown RBP9.04□□□□□ -0.96
ERGIC3-202ENST00000348547 ZNF493Q6ZR52 646 aa9.04□□□□□ -0.96
ERGIC3-202ENST00000348547 SFRP2Q96HF1 295 aa9.04□□□□□ -0.96
ERGIC3-202ENST00000348547 RPP21Q9H633 154 aaKnown RBP9.04□□□□□ -0.96
ERGIC3-202ENST00000348547 OSTCQ9NRP0 149 aa9.04□□□□□ -0.96
ERGIC3-202ENST00000348547 MRPL16Q9NX20 251 aaKnown RBP9.04□□□□□ -0.96
ERGIC3-202ENST00000348547 TRGV11A0A075B6L2 103 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 MUC21A0A0G2JKD1 596 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 MUC21A0A140T8X8 626 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 SPINK4O60575 86 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 P01737 135 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 NANOS2P60321 138 aaKnown RBP9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 C12orf74Q32Q52 190 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 POM121L12Q8N7R1 296 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 OR10AG1Q8NH19 301 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 KCNS1Q96KK3 526 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 SSBP4Q9BWG4 385 aaPredicted RBP9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 VPS13DQ5THJ4 4388 aa9.03□□□□□ -0.96
ERGIC3-202ENST00000348547 NXPH4O95158 308 aa9.02□□□□□ -0.97
ERGIC3-202ENST00000348547 CXCL1P09341 107 aa9.02□□□□□ -0.97
ERGIC3-202ENST00000348547 ARMS2P0C7Q2 107 aa9.02□□□□□ -0.97
ERGIC3-202ENST00000348547 ERVFC1-1P60608 527 aa9.02□□□□□ -0.97
ERGIC3-202ENST00000348547 ZNF415Q09FC8 603 aa9.02□□□□□ -0.97
ERGIC3-202ENST00000348547 IL36BQ9NZH7 164 aa9.02□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms