RNA–Protein interactions for RNA: ENST00000347615.6

SMG7-201, Transcript of SMG7, nonsense mediated mRNA decay factor, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMG7, Length 5,788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG7-201ENST00000347615 IGKV1-17P01599 117 aa8.21□□□□□ -1.09
SMG7-201ENST00000347615 DEFB130BP0DP73 79 aa8.21□□□□□ -1.1
SMG7-201ENST00000347615 DEFB130AP0DP74 79 aa8.21□□□□□ -1.1
SMG7-201ENST00000347615 HIST1H4AP62805 103 aaKnown RBP8.21□□□□□ -1.1
SMG7-201ENST00000347615 KLF5Q13887 457 aaPredicted RBP8.21□□□□□ -1.1
SMG7-201ENST00000347615 TMEM14CQ9P0S9 112 aa8.21□□□□□ -1.1
SMG7-201ENST00000347615 DEFB136Q30KP8 78 aa8.21□□□□□ -1.1
SMG7-201ENST00000347615 A0A096LPF7 62 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 K7EIM0 57 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 DPH3Q96FX2 82 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 POU2AF1Q16633 256 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 COPS9Q8WXC6 57 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 SCRT2Q9NQ03 307 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 RNF114Q9Y508 228 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 COL4A4P53420 1690 aaPredicted RBP8.2□□□□□ -1.1
SMG7-201ENST00000347615 GAGE12JA6NER3 117 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 I3L2K1 104 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 GAGE4Q13068 117 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 GAGE5Q13069 117 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 CFAP161Q6P656 301 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 IGLV2-23P01705 113 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 HOXB4P17483 251 aaPredicted RBP8.2□□□□□ -1.1
SMG7-201ENST00000347615 UBE2E1P51965 193 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 FXYD2P54710 66 aa8.2□□□□□ -1.1
SMG7-201ENST00000347615 FGF6P10767 208 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 ATXN8Q156A1 80 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 C12orf74Q32Q52 190 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 PRIMA1Q86XR5 153 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 LINC00311Q8N616 119 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 NRGNQ92686 78 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 TEX48A0A1B0GUV7 120 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 GAGE2AQ6NT46 116 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 FAM223BA6NKX1 122 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 FAM223AQ8IWN6 122 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 PFN2P35080 140 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 DEFB125Q8N687 156 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 SMIM2Q9BVW6 85 aa8.19□□□□□ -1.1
SMG7-201ENST00000347615 IGHV2-70DA0A0C4DH43 119 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 PRSS29PA6NIE9 313 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 BPTFQ12830 3046 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 TAX1BP3O14907 124 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 TP53TG3Q9ULZ0 132 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 RBMY1BA6NDE4 496 aaKnown RBP8.18□□□□□ -1.1
SMG7-201ENST00000347615 GAGE12HA6NDE8 117 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 RBMY1EA6NEQ0 496 aaKnown RBP8.18□□□□□ -1.1
SMG7-201ENST00000347615 RBMY1DP0C7P1 496 aaKnown RBP8.18□□□□□ -1.1
SMG7-201ENST00000347615 RBMY1A1P0DJD3 496 aaKnown RBP8.18□□□□□ -1.1
SMG7-201ENST00000347615 RBMY1CP0DJD4 496 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 CLPSL2Q6UWE3 100 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 LTBP2Q14767 1821 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 PMVKQ15126 192 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 Q71RC1 249 aaPredicted RBP8.18□□□□□ -1.1
SMG7-201ENST00000347615 TRBV25-1A0A075B6N4 114 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 YPEL4Q96NS1 127 aa8.18□□□□□ -1.1
SMG7-201ENST00000347615 FAM208BQ5VWN6 2430 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 OOSP1A8MZH6 123 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 K7ENP7 123 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 IGLV2-8P01709 118 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 RPL39P62891 51 aaKnown RBP8.17□□□□□ -1.1
SMG7-201ENST00000347615 PLEKHB2Q96CS7 222 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.17□□□□□ -1.1
SMG7-201ENST00000347615 IGHV1-69DA0A0B4J2H0 117 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 IGKV2-29A2NJV5 120 aaPredicted RBP8.17□□□□□ -1.1
SMG7-201ENST00000347615 B4DSR2 109 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 IGHV1-69P01742 117 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 BLCAPP62952 87 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 ZNF48Q96MX3 618 aaPredicted RBP8.17□□□□□ -1.1
SMG7-201ENST00000347615 LAMA2P24043 3122 aaKnown RBP8.17□□□□□ -1.1
SMG7-201ENST00000347615 TECTAO75443 2155 aa8.17□□□□□ -1.1
SMG7-201ENST00000347615 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.16□□□□□ -1.1
SMG7-201ENST00000347615 F8VRH5 84 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 WFDC2Q14508 124 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 EDA2RQ9HAV5 297 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 HIST2H2BDQ6DRA6 164 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 IGFL3Q6UXB1 125 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 ZNRF2Q8NHG8 242 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 USMG5Q96IX5 58 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 IGKV1D-37A0A075B6S9 117 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 A0A087WX48 190 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 TEX22C9J3V5 150 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 CTSGP08311 255 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 DAND5Q8N907 189 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 LY6G5BQ8NDX9 201 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 IGHV7-81A0A0B4J1V7 117 aa8.16□□□□□ -1.1
SMG7-201ENST00000347615 TRBV20-1A0A075B6N2 111 aa8.15□□□□□ -1.1
SMG7-201ENST00000347615 IGHV4-38-2P0DP08 117 aa8.15□□□□□ -1.1
SMG7-201ENST00000347615 RPL36AP83881 106 aaKnown RBP8.15□□□□□ -1.1
SMG7-201ENST00000347615 RPL36ALQ969Q0 106 aaKnown RBP8.15□□□□□ -1.1
SMG7-201ENST00000347615 NXPH4O95158 308 aa8.15□□□□□ -1.1
SMG7-201ENST00000347615 CRPP02741 224 aa8.15□□□□□ -1.1
SMG7-201ENST00000347615 P0C879 139 aa8.15□□□□□ -1.1
SMG7-201ENST00000347615 TRPT1Q86TN4 253 aaKnown RBP8.15□□□□□ -1.1
SMG7-201ENST00000347615 SPAG8Q99932 426 aaPredicted RBP8.15□□□□□ -1.1
SMG7-201ENST00000347615 MSMBP08118 114 aa8.15□□□□□ -1.1
SMG7-201ENST00000347615 TCTEX1D4Q5JR98 221 aa8.15□□□□□ -1.1
SMG7-201ENST00000347615 NCOR1P1Q9H4R4 102 aa8.15□□□□□ -1.1
SMG7-201ENST00000347615 PRB1P04280 392 aa8.15□□□□□ -1.11
SMG7-201ENST00000347615 JPT2Q9H910 190 aa8.15□□□□□ -1.11
SMG7-201ENST00000347615 MORN3Q6PF18 240 aaPredicted RBP8.14□□□□□ -1.11
SMG7-201ENST00000347615 APRG1Q8IVJ8 170 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms