RNA–Protein interactions for RNA: ENST00000346162.10

SRPK1-201, Transcript of SRSF protein kinase 1, humanhuman

TSL 2

Gene SRPK1, Length 4,762 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-201ENST00000346162 CFC1BP0CG36 223 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 CFC1P0CG37 223 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 ZNF625Q96I27 306 aaPredicted RBP12.26□□□□□ -0.45
SRPK1-201ENST00000346162 B4DSR2 109 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 S100A7L2Q5SY68 101 aa12.26□□□□□ -0.45
SRPK1-201ENST00000346162 SHISA9B4DS77 424 aa12.25□□□□□ -0.45
SRPK1-201ENST00000346162 KAAG1Q9UBP8 84 aa12.25□□□□□ -0.45
SRPK1-201ENST00000346162 C9orf139Q6ZV77 190 aa12.25□□□□□ -0.45
SRPK1-201ENST00000346162 ODF3L1Q8IXM7 274 aa12.25□□□□□ -0.45
SRPK1-201ENST00000346162 RS1O15537 224 aa12.25□□□□□ -0.45
SRPK1-201ENST00000346162 RPL32P62910 135 aaKnown RBP12.25□□□□□ -0.45
SRPK1-201ENST00000346162 SPRNQ5BIV9 151 aa12.25□□□□□ -0.45
SRPK1-201ENST00000346162 SPXQ9BT56 116 aa12.25□□□□□ -0.45
SRPK1-201ENST00000346162 DUSP14O95147 198 aaKnown RBP12.24□□□□□ -0.45
SRPK1-201ENST00000346162 MED12LQ86YW9 2145 aa12.24□□□□□ -0.45
SRPK1-201ENST00000346162 LINC01587Q99440 93 aa12.24□□□□□ -0.45
SRPK1-201ENST00000346162 PEMTQ9UBM1 199 aa12.24□□□□□ -0.45
SRPK1-201ENST00000346162 CSPG4Q6UVK1 2322 aa12.24□□□□□ -0.45
SRPK1-201ENST00000346162 TRBV19A0A075B6N1 114 aa12.23□□□□□ -0.45
SRPK1-201ENST00000346162 DSCR9P59020 149 aa12.23□□□□□ -0.45
SRPK1-201ENST00000346162 UTF1Q5T230 341 aa12.23□□□□□ -0.45
SRPK1-201ENST00000346162 IGHG4P01861 327 aa12.23□□□□□ -0.45
SRPK1-201ENST00000346162 UBE2E1P51965 193 aa12.23□□□□□ -0.45
SRPK1-201ENST00000346162 IGF2BP2-AS1Q96M15 143 aa12.23□□□□□ -0.45
SRPK1-201ENST00000346162 LHBP01229 141 aa12.23□□□□□ -0.45
SRPK1-201ENST00000346162 TMEM14CQ9P0S9 112 aa12.22□□□□□ -0.45
SRPK1-201ENST00000346162 OVOL2Q9BRP0 275 aa12.22□□□□□ -0.45
SRPK1-201ENST00000346162 TIMM21Q9BVV7 248 aa12.22□□□□□ -0.45
SRPK1-201ENST00000346162 A0A1W2PRX2 142 aa12.22□□□□□ -0.45
SRPK1-201ENST00000346162 NBL1P41271 181 aa12.22□□□□□ -0.45
SRPK1-201ENST00000346162 CTSZQ9UBR2 303 aa12.22□□□□□ -0.45
SRPK1-201ENST00000346162 E9PLD3 99 aa12.22□□□□□ -0.45
SRPK1-201ENST00000346162 TMEM131Q92545 1883 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 TRAV13-1A0A0B4J241 112 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 TRAV26-2A0A0B4J265 109 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 PF4P02776 101 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 GATD1Q8NB37 220 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 SPATA25Q9BR10 227 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 PLXNB1O43157 2135 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 ATP6V0E1O15342 81 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 PRSS33Q8NF86 280 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 TP53TG1Q9Y2A0 90 aa12.21□□□□□ -0.45
SRPK1-201ENST00000346162 SYNJ2BPP57105 145 aa12.21□□□□□ -0.46
SRPK1-201ENST00000346162 DTX2Q86UW9 622 aa12.21□□□□□ -0.46
SRPK1-201ENST00000346162 MRAPQ8TCY5 172 aa12.21□□□□□ -0.46
SRPK1-201ENST00000346162 USMG5Q96IX5 58 aa12.21□□□□□ -0.46
SRPK1-201ENST00000346162 CR1LQ2VPA4 569 aa12.2□□□□□ -0.46
SRPK1-201ENST00000346162 LINC00477Q96M19 166 aa12.2□□□□□ -0.46
SRPK1-201ENST00000346162 WISP2O76076 250 aa12.2□□□□□ -0.46
SRPK1-201ENST00000346162 TNCP24821 2201 aa12.2□□□□□ -0.46
SRPK1-201ENST00000346162 GHRHP01286 108 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 FAM110DQ8TAY7 271 aaPredicted RBP12.19□□□□□ -0.46
SRPK1-201ENST00000346162 J3QQQ9 107 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 IGF2-ASQ6U949 168 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 TMEM141Q96I45 108 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 ADAMTS9Q9P2N4 1935 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 G3V318 75 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 LINC00310P59036 64 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 ZNF415Q09FC8 603 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 THAP8Q8NA92 274 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 SMIM2Q9BVW6 85 aa12.19□□□□□ -0.46
SRPK1-201ENST00000346162 FAM223BA6NKX1 122 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 ZNF876PQ49A33 203 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 LINC01620Q4KN68 170 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 FAM223AQ8IWN6 122 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 ERCC8Q13216 396 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 GDF5OSQ5U4N7 250 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 C11orf44Q8N8P7 122 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 RHPN1-AS1Q9BWJ2 59 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 CRPP02741 224 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 RUSC1-AS1Q66K80 236 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 SEM1Q6ZVN7 128 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 PRR25Q96S07 402 aa12.18□□□□□ -0.46
SRPK1-201ENST00000346162 EML6Q6ZMW3 1958 aa12.17□□□□□ -0.46
SRPK1-201ENST00000346162 ZNF493Q6ZR52 646 aa12.17□□□□□ -0.46
SRPK1-201ENST00000346162 C8orf31Q8N9H6 132 aa12.17□□□□□ -0.46
SRPK1-201ENST00000346162 OVOL3O00110 214 aa12.17□□□□□ -0.46
SRPK1-201ENST00000346162 GRNP28799 593 aaKnown RBP12.17□□□□□ -0.46
SRPK1-201ENST00000346162 KLHL30-AS1Q8NEE0 82 aa12.17□□□□□ -0.46
SRPK1-201ENST00000346162 CHCHD5Q9BSY4 110 aa12.17□□□□□ -0.46
SRPK1-201ENST00000346162 ACYP1P07311 99 aa12.16□□□□□ -0.46
SRPK1-201ENST00000346162 Q8N976 141 aa12.16□□□□□ -0.46
SRPK1-201ENST00000346162 PIEZO1Q92508 2521 aa12.16□□□□□ -0.46
SRPK1-201ENST00000346162 GATA1P15976 413 aaPredicted RBP12.16□□□□□ -0.46
SRPK1-201ENST00000346162 C2orf91Q6ZV80 131 aa12.16□□□□□ -0.46
SRPK1-201ENST00000346162 LY6G5BQ8NDX9 201 aa12.16□□□□□ -0.46
SRPK1-201ENST00000346162 CRIP3Q6Q6R5 217 aa12.16□□□□□ -0.46
SRPK1-201ENST00000346162 PIEZO2Q9H5I5 2752 aa12.16□□□□□ -0.46
SRPK1-201ENST00000346162 TRGV11A0A075B6L2 103 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 IGLV2-14P01704 120 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 INSL3P51460 131 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 STHQ8IWL8 128 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 RBM3P98179 157 aaKnown RBP12.15□□□□□ -0.46
SRPK1-201ENST00000346162 UFSP1Q6NVU6 142 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 TRGV2A0A075B6R0 118 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 ATOX1O00244 68 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 SOCS3O14543 225 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 XGP55808 180 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 ODF1Q14990 250 aa12.15□□□□□ -0.46
SRPK1-201ENST00000346162 ZNF295-AS1Q8N0V1 137 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms