RNA–Protein interactions for RNA: ENST00000344337.10

KPNA1-201, Transcript of karyopherin subunit alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KPNA1, Length 6,830 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA1-201ENST00000344337 ACANP16112 2415 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 PRAC2D3DTV9 90 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 HIST1H4AP62805 103 aaKnown RBP6.17□□□□□ -1.42
KPNA1-201ENST00000344337 ZNF503Q96F45 646 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 ZNF48Q96MX3 618 aaPredicted RBP6.17□□□□□ -1.42
KPNA1-201ENST00000344337 TP53TG1Q9Y2A0 90 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 PRB2P02812 416 aaPredicted RBP6.17□□□□□ -1.42
KPNA1-201ENST00000344337 FAM104BQ5XKR9 115 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 Q6ZS49 121 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 GATD1Q8NB37 220 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 A0A096LPF7 62 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 VWC2LB2RUY7 222 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 ATP6V0E1O15342 81 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 C1orf159Q96HA4 380 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 TRGV9Q99603 122 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 ZNF747Q9BV97 191 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 CTSZQ9UBR2 303 aa6.17□□□□□ -1.42
KPNA1-201ENST00000344337 CLPSL2Q6UWE3 100 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 BPESC1Q9GZL8 116 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 A0A1W2PNU3 283 aaPredicted RBP6.16□□□□□ -1.42
KPNA1-201ENST00000344337 H3BUX3 64 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 OVOL3O00110 214 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 PRADC1Q9BSG0 188 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 TRAV8-4A0A0B4J246 113 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 PRSS29PA6NIE9 313 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 ZFAND6Q6FIF0 208 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 CFHR4Q92496 578 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 MRPS18CQ9Y3D5 142 aaKnown RBP6.16□□□□□ -1.42
KPNA1-201ENST00000344337 CPAMD8Q8IZJ3 1885 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 SAA4P35542 130 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 C5orf64Q2M2E5 130 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 ASH1LQ9NR48 2969 aaKnown RBP6.16□□□□□ -1.42
KPNA1-201ENST00000344337 TRBV19A0A075B6N1 114 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 IGHV2-70DA0A0C4DH43 119 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 OPRPNQ99935 248 aaPredicted RBP6.16□□□□□ -1.42
KPNA1-201ENST00000344337 PYGO2Q9BRQ0 406 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 JPT2Q9H910 190 aa6.16□□□□□ -1.42
KPNA1-201ENST00000344337 RPL35AP18077 110 aaKnown RBP6.15□□□□□ -1.42
KPNA1-201ENST00000344337 C2orf82Q6UX34 121 aa6.15□□□□□ -1.42
KPNA1-201ENST00000344337 YPEL4Q96NS1 127 aa6.15□□□□□ -1.42
KPNA1-201ENST00000344337 SNRPD3P62318 126 aaKnown RBP6.15□□□□□ -1.42
KPNA1-201ENST00000344337 RPL39P62891 51 aaKnown RBP6.15□□□□□ -1.42
KPNA1-201ENST00000344337 DLX4Q92988 240 aaPredicted RBP6.15□□□□□ -1.42
KPNA1-201ENST00000344337 TRAV12-1A0A0B4J245 112 aa6.15□□□□□ -1.42
KPNA1-201ENST00000344337 LRBAP50851 2863 aa6.15□□□□□ -1.43
KPNA1-201ENST00000344337 H3BRM9 83 aa6.15□□□□□ -1.43
KPNA1-201ENST00000344337 GAS8-AS1O95177 125 aa6.15□□□□□ -1.43
KPNA1-201ENST00000344337 C1orf162Q8NEQ5 155 aaPredicted RBP6.15□□□□□ -1.43
KPNA1-201ENST00000344337 C11orf1Q9H5F2 150 aa6.15□□□□□ -1.43
KPNA1-201ENST00000344337 TRGV2A0A075B6R0 118 aa6.15□□□□□ -1.43
KPNA1-201ENST00000344337 FGF6P10767 208 aa6.15□□□□□ -1.43
KPNA1-201ENST00000344337 FAM167A-AS1Q96KT0 104 aa6.15□□□□□ -1.43
KPNA1-201ENST00000344337 MSRB2Q9Y3D2 182 aa6.15□□□□□ -1.43
KPNA1-201ENST00000344337 CIRBPQ14011 172 aaKnown RBP6.14□□□□□ -1.43
KPNA1-201ENST00000344337 Q6ZQT7 251 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 PRR25Q96S07 402 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 IGLC1P0CG04 106 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 LOXP28300 417 aaPredicted RBP6.14□□□□□ -1.43
KPNA1-201ENST00000344337 CDKN1BP46527 198 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 RBAKDNA6NC62 111 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 K7EP34 96 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 PVRIGQ6DKI7 326 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 C2orf66Q6UXQ4 117 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 CEND1Q8N111 149 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 OR9G4Q8NGQ1 327 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 TRAV21A0A0B4J279 112 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 HOXD3P31249 432 aaPredicted RBP6.14□□□□□ -1.43
KPNA1-201ENST00000344337 C12orf74Q32Q52 190 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 DEFB125Q8N687 156 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 CCL19Q99731 98 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 TRBV25-1A0A075B6N4 114 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 LINC00158P58513 81 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 NRGNQ92686 78 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 SHANK2-AS3Q9BTD1 123 aa6.14□□□□□ -1.43
KPNA1-201ENST00000344337 M0R2P5 195 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 COA6Q5JTJ3 125 aaKnown RBP6.13□□□□□ -1.43
KPNA1-201ENST00000344337 USP24Q9UPU5 2620 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 PFN2P35080 140 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 DEFB136Q30KP8 78 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 SCRT2Q9NQ03 307 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 PRM2P04554 102 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 Q6AWC8 147 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 TRPT1Q86TN4 253 aaKnown RBP6.13□□□□□ -1.43
KPNA1-201ENST00000344337 ZNF491Q8N8L2 437 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 CITED1Q99966 193 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 ZZEF1O43149 2961 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 XCL2Q9UBD3 114 aa6.13□□□□□ -1.43
KPNA1-201ENST00000344337 MRPL23Q16540 153 aaKnown RBP6.12□□□□□ -1.43
KPNA1-201ENST00000344337 C20orf78Q9BR46 151 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 ETV2O00321 342 aaPredicted RBP6.12□□□□□ -1.43
KPNA1-201ENST00000344337 C8orf86Q6ZUL3 223 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 IGF1P05019 195 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 GAGE2AQ6NT46 116 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 RHPN1-AS1Q9BWJ2 59 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 TRAV26-1A0A087WT03 109 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 J3QW42 95 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 ITGB1BP1O14713 200 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 FAM215AQ9Y5M1 114 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 TRGV1A0A0A0MS02 117 aa6.12□□□□□ -1.43
KPNA1-201ENST00000344337 CEMP1Q6PRD7 247 aaPredicted RBP6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms