RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 CRXO43186 299 aaPredicted RBP14.06□□□□□ -0.16
HOXA9-201ENST00000343483 FA2HQ7L5A8 372 aa14.06□□□□□ -0.16
HOXA9-201ENST00000343483 ZNF575Q86XF7 245 aa14.06□□□□□ -0.16
HOXA9-201ENST00000343483 RNF152Q8N8N0 203 aa14.06□□□□□ -0.16
HOXA9-201ENST00000343483 U3KQK5 164 aa14.06□□□□□ -0.16
HOXA9-201ENST00000343483 NIPBLQ6KC79 2804 aaeCLIP14.06□□□□□ -0.16
HOXA9-201ENST00000343483 OVOL1O14753 267 aa14.06□□□□□ -0.16
HOXA9-201ENST00000343483 NUTF2P61970 127 aaKnown RBP14.06□□□□□ -0.16
HOXA9-201ENST00000343483 TMEM86BQ8N661 226 aa14.06□□□□□ -0.16
HOXA9-201ENST00000343483 SONP18583 2426 aaKnown RBP14.06□□□□□ -0.16
HOXA9-201ENST00000343483 HOXD3P31249 432 aaPredicted RBP14.05□□□□□ -0.16
HOXA9-201ENST00000343483 LINC01559Q495D7 138 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 ORMDL3Q8N138 153 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 PRELID3AQ96N28 172 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 YAE1D1Q9NRH1 226 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 HSPB8Q9UJY1 196 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 TIMM8BQ9Y5J9 83 aaPredicted RBP14.05□□□□□ -0.16
HOXA9-201ENST00000343483 C20orf202A1L168 122 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 DNAJC9-AS1A6NH13 148 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 HIST1H1AQ02539 215 aaPredicted RBP14.05□□□□□ -0.16
HOXA9-201ENST00000343483 KRTAP1-1Q07627 177 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 MRPL51Q4U2R6 128 aaKnown RBP14.05□□□□□ -0.16
HOXA9-201ENST00000343483 WFDC3Q8IUB2 231 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 MAP1LC3CQ9BXW4 147 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 PPP1R14DQ9NXH3 145 aa14.05□□□□□ -0.16
HOXA9-201ENST00000343483 CUBNO60494 3623 aa14.04□□□□□ -0.16
HOXA9-201ENST00000343483 F6UB75 175 aa14.04□□□□□ -0.16
HOXA9-201ENST00000343483 J3KRW8 73 aa14.04□□□□□ -0.16
HOXA9-201ENST00000343483 Q6ZN92 141 aa14.04□□□□□ -0.16
HOXA9-201ENST00000343483 LINC00477Q96M19 166 aa14.04□□□□□ -0.16
HOXA9-201ENST00000343483 LOC389332A0A1B0GUA5 103 aa14.03□□□□□ -0.16
HOXA9-201ENST00000343483 OR4C46A6NHA9 309 aa14.03□□□□□ -0.16
HOXA9-201ENST00000343483 CD5LO43866 347 aa14.03□□□□□ -0.16
HOXA9-201ENST00000343483 IFI27P40305 119 aaPredicted RBP14.03□□□□□ -0.16
HOXA9-201ENST00000343483 DEFB136Q30KP8 78 aa14.03□□□□□ -0.16
HOXA9-201ENST00000343483 C18orf65Q6ZTR6 163 aa14.03□□□□□ -0.16
HOXA9-201ENST00000343483 C11orf21Q9P2W6 132 aa14.03□□□□□ -0.16
HOXA9-201ENST00000343483 Q6ZQT7 251 aa14.03□□□□□ -0.16
HOXA9-201ENST00000343483 SETD2Q9BYW2 2564 aaPredicted RBP14.02□□□□□ -0.16
HOXA9-201ENST00000343483 IGKV3D-20A0A0C4DH25 116 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 IGLL1P15814 213 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 TFPI2P48307 235 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 HNRNPA3P51991 378 aaKnown RBP14.02□□□□□ -0.16
HOXA9-201ENST00000343483 KHDC1LQ5JSQ8 128 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 PRR9Q5T870 116 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 OR8A1Q8NGG7 326 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 DCANP1Q8TF63 244 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 CNFNQ9BYD5 112 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 SIGLEC8Q9NYZ4 499 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 LENEPQ9Y5L5 61 aa14.02□□□□□ -0.16
HOXA9-201ENST00000343483 LY6G6DO95868 133 aa14.02□□□□□ -0.17
HOXA9-201ENST00000343483 CKS2P33552 79 aa14.02□□□□□ -0.17
HOXA9-201ENST00000343483 ID1P41134 155 aa14.02□□□□□ -0.17
HOXA9-201ENST00000343483 BATFQ16520 125 aa14.02□□□□□ -0.17
HOXA9-201ENST00000343483 PET117Q6UWS5 81 aa14.02□□□□□ -0.17
HOXA9-201ENST00000343483 OR10AG1Q8NH19 301 aa14.02□□□□□ -0.17
HOXA9-201ENST00000343483 TMEM191AQ9H0A3 160 aa14.02□□□□□ -0.17
HOXA9-201ENST00000343483 MSRB1Q9NZV6 116 aa14.02□□□□□ -0.17
HOXA9-201ENST00000343483 LGALS9O00182 355 aa14.01□□□□□ -0.17
HOXA9-201ENST00000343483 MS4A6AQ9H2W1 248 aa14.01□□□□□ -0.17
HOXA9-201ENST00000343483 H0Y8G0 127 aa14□□□□□ -0.17
HOXA9-201ENST00000343483 SMKR1H3BMG3 65 aa14□□□□□ -0.17
HOXA9-201ENST00000343483 Q6ZSV7 163 aa14□□□□□ -0.17
HOXA9-201ENST00000343483 ESM1Q9NQ30 184 aa14□□□□□ -0.17
HOXA9-201ENST00000343483 ANK3Q12955 4377 aaKnown RBP14□□□□□ -0.17
HOXA9-201ENST00000343483 SAMD13Q5VXD3 122 aa14□□□□□ -0.17
HOXA9-201ENST00000343483 ZFAND2AQ8N6M9 145 aa14□□□□□ -0.17
HOXA9-201ENST00000343483 NSD1Q96L73 2696 aaPredicted RBP13.99□□□□□ -0.17
HOXA9-201ENST00000343483 SLURP1P55000 103 aa13.99□□□□□ -0.17
HOXA9-201ENST00000343483 TCTEX1D4Q5JR98 221 aa13.99□□□□□ -0.17
HOXA9-201ENST00000343483 NCR2O95944 276 aa13.99□□□□□ -0.17
HOXA9-201ENST00000343483 NPYP01303 97 aa13.99□□□□□ -0.17
HOXA9-201ENST00000343483 ZNF747Q9BV97 191 aa13.99□□□□□ -0.17
HOXA9-201ENST00000343483 FN1P02751 2386 aaKnown RBP13.98□□□□□ -0.17
HOXA9-201ENST00000343483 TCAPO15273 167 aa13.98□□□□□ -0.17
HOXA9-201ENST00000343483 ZNF688P0C7X2 276 aa13.98□□□□□ -0.17
HOXA9-201ENST00000343483 HIST2H2BDQ6DRA6 164 aa13.98□□□□□ -0.17
HOXA9-201ENST00000343483 RNF185Q96GF1 192 aa13.98□□□□□ -0.17
HOXA9-201ENST00000343483 MCRIP2Q9BUT9 160 aaKnown RBP13.98□□□□□ -0.17
HOXA9-201ENST00000343483 NF1P21359 2839 aa13.97□□□□□ -0.17
HOXA9-201ENST00000343483 TSPOP30536 169 aa13.97□□□□□ -0.17
HOXA9-201ENST00000343483 OR11H1Q8NG94 326 aa13.97□□□□□ -0.17
HOXA9-201ENST00000343483 DUX3Q96PT4 197 aa13.97□□□□□ -0.17
HOXA9-201ENST00000343483 hDV102S1A0JD36 115 aa13.97□□□□□ -0.17
HOXA9-201ENST00000343483 PSMG4Q5JS54 123 aa13.97□□□□□ -0.17
HOXA9-201ENST00000343483 C4orf3Q8WVX3 66 aa13.97□□□□□ -0.17
HOXA9-201ENST00000343483 A0A096LNJ9 63 aa13.96□□□□□ -0.17
HOXA9-201ENST00000343483 LINC01619G3V211 115 aa13.96□□□□□ -0.17
HOXA9-201ENST00000343483 RNASE4P34096 147 aaKnown RBP13.96□□□□□ -0.17
HOXA9-201ENST00000343483 SNRPD3P62318 126 aaKnown RBP13.96□□□□□ -0.17
HOXA9-201ENST00000343483 FAM19A4Q96LR4 140 aa13.96□□□□□ -0.17
HOXA9-201ENST00000343483 ST20Q9HBF5 79 aa13.96□□□□□ -0.17
HOXA9-201ENST00000343483 HIVEP2P31629 2446 aa13.96□□□□□ -0.18
HOXA9-201ENST00000343483 TRAV21A0A0B4J279 112 aa13.95□□□□□ -0.18
HOXA9-201ENST00000343483 HSBP1L1C9JCN9 74 aa13.95□□□□□ -0.18
HOXA9-201ENST00000343483 LINC01545Q5VT33 79 aa13.95□□□□□ -0.18
HOXA9-201ENST00000343483 KLHL30-AS1Q8NEE0 82 aa13.95□□□□□ -0.18
HOXA9-201ENST00000343483 DPF1Q92782 380 aa13.95□□□□□ -0.18
HOXA9-201ENST00000343483 LAMTOR2Q9Y2Q5 125 aa13.95□□□□□ -0.18
HOXA9-201ENST00000343483 PPBPP02775 128 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 274.7 ms