RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 H7C1H1 209 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 CRXO43186 299 aaPredicted RBP9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 SH2D6Q7Z4S9 175 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 MLST8Q9BVC4 326 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 IGLV1-47P01700 117 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 SLC25A16P16260 332 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 FXYD2P54710 66 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 C2orf66Q6UXQ4 117 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 GEMIN7Q9H840 131 aaKnown RBP9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 SPTBN5Q9NRC6 3674 aaKnown RBP9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 TRAV8-2A0A0B4J237 113 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 A0A1B0GV72 72 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 K7EP34 96 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 CDKN1BP46527 198 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 MAPK1IP1LQ8NDC0 245 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 SMPXQ9UHP9 88 aa9.72□□□□□ -0.85
SNRNP48-201ENST00000342415 GNLYP22749 145 aa9.71□□□□□ -0.85
SNRNP48-201ENST00000342415 VCX2Q9H322 139 aa9.71□□□□□ -0.85
SNRNP48-201ENST00000342415 C1orf122Q6ZSJ8 110 aa9.71□□□□□ -0.85
SNRNP48-201ENST00000342415 RHPN1-AS1Q9BWJ2 59 aa9.71□□□□□ -0.85
SNRNP48-201ENST00000342415 PRSS22Q9GZN4 317 aa9.71□□□□□ -0.85
SNRNP48-201ENST00000342415 TEX48A0A1B0GUV7 120 aa9.71□□□□□ -0.86
SNRNP48-201ENST00000342415 LINC01549A6NIU2 74 aa9.71□□□□□ -0.86
SNRNP48-201ENST00000342415 DPH3P1Q9H4G8 78 aa9.71□□□□□ -0.86
SNRNP48-201ENST00000342415 TRBV25-1A0A075B6N4 114 aa9.71□□□□□ -0.86
SNRNP48-201ENST00000342415 NPFFO15130 113 aa9.71□□□□□ -0.86
SNRNP48-201ENST00000342415 CTSGP08311 255 aa9.71□□□□□ -0.86
SNRNP48-201ENST00000342415 ZNF80P51504 273 aaPredicted RBP9.71□□□□□ -0.86
SNRNP48-201ENST00000342415 Q8N976 141 aa9.71□□□□□ -0.86
SNRNP48-201ENST00000342415 M0R1W7 72 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 COX6CP09669 75 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 SUMO2P61956 95 aaKnown RBP9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 MRAP2Q96G30 205 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 BOD1L1Q8NFC6 3051 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 PLNP26678 52 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 TNFRSF18Q9Y5U5 241 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 TRAV12-2A0A075B6T6 113 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 ANXA2RQ3ZCQ2 193 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 ZNF876PQ49A33 203 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 Q8N8P6 123 aa9.7□□□□□ -0.86
SNRNP48-201ENST00000342415 KNCNA6PVL3 124 aa9.69□□□□□ -0.86
SNRNP48-201ENST00000342415 GNRH2O43555 120 aa9.69□□□□□ -0.86
SNRNP48-201ENST00000342415 CRYGCP07315 174 aa9.69□□□□□ -0.86
SNRNP48-201ENST00000342415 MINOS1Q5TGZ0 78 aa9.69□□□□□ -0.86
SNRNP48-201ENST00000342415 MINOS1-NBL1R4GNA1 71 aa9.69□□□□□ -0.86
SNRNP48-201ENST00000342415 K7ENP7 123 aa9.69□□□□□ -0.86
SNRNP48-201ENST00000342415 ITLN2Q8WWU7 325 aaPredicted RBP9.69□□□□□ -0.86
SNRNP48-201ENST00000342415 TP53TG1Q9Y2A0 90 aa9.69□□□□□ -0.86
SNRNP48-201ENST00000342415 DUX3Q96PT4 197 aa9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 PRADC1Q9BSG0 188 aa9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 COX6B1P14854 86 aa9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 CRIP1P50238 77 aa9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 MEIG1Q5JSS6 88 aa9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 DOPEY1Q5JWR5 2465 aa9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 PPP1R17O96001 155 aa9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 C9orf139Q6ZV77 190 aa9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 RPL39LQ96EH5 51 aaKnown RBP9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 SRSF8Q9BRL6 282 aaKnown RBP9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 MOB4Q9Y3A3 225 aa9.68□□□□□ -0.86
SNRNP48-201ENST00000342415 HLA-DRB4P13762 266 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 TTC32Q5I0X7 151 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 KLHL30-AS1Q8NEE0 82 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 SPOCK3Q9BQ16 436 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 HLA-DRB4X5D2U9 266 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 IGHV7-81A0A0B4J1V7 117 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 WFDC2Q14508 124 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 SPXQ9BT56 116 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 NDUFS8O00217 210 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 OVOL1O14753 267 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 FANCD2OSQ96PS1 177 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 KLK9Q9UKQ9 250 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 CENPEQ02224 2701 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 IGLV11-55A0A075B6I3 123 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 A0A1W2PRX2 142 aa9.67□□□□□ -0.86
SNRNP48-201ENST00000342415 TRBV7-1A0A0A6YYK4 115 aa9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 FAM110DQ8TAY7 271 aaPredicted RBP9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 SMIM2Q9BVW6 85 aa9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 A8MWV9 139 aa9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 URB1-AS1Q96HZ7 61 aa9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 CD28P10747 220 aa9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 FASNP49327 2511 aaKnown RBP9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 TCF15Q12870 199 aa9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 SPINK13Q1W4C9 94 aa9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 CEND1Q8N111 149 aa9.66□□□□□ -0.86
SNRNP48-201ENST00000342415 EPG5Q9HCE0 2579 aa9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 ADARB2-AS1A8MUL3 147 aa9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 ZNF625Q96I27 306 aaPredicted RBP9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 PRO3102Q9H379 93 aa9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 TOMM7Q9P0U1 55 aa9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 F8VRH5 84 aa9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 AZU1P20160 251 aa9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 RBX1P62877 108 aa9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 C12orf74Q32Q52 190 aa9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 DLX4Q92988 240 aaPredicted RBP9.65□□□□□ -0.86
SNRNP48-201ENST00000342415 LINC01548A6NM66 108 aa9.65□□□□□ -0.87
SNRNP48-201ENST00000342415 OOSP1A8MZH6 123 aa9.65□□□□□ -0.87
SNRNP48-201ENST00000342415 SNCGO76070 127 aa9.65□□□□□ -0.87
SNRNP48-201ENST00000342415 GAS8-AS1O95177 125 aa9.65□□□□□ -0.87
SNRNP48-201ENST00000342415 RNASE13Q5GAN3 156 aaKnown RBP9.65□□□□□ -0.87
SNRNP48-201ENST00000342415 LINC01587Q99440 93 aa9.65□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 188.5 ms