RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 PRB4P10163 310 aaPredicted RBP14.26□□□□□ -0.13
SMPD1-201ENST00000342245 TMEM155Q4W5P6 130 aa14.26□□□□□ -0.13
SMPD1-201ENST00000342245 IMUPQ9GZP8 106 aa14.26□□□□□ -0.13
SMPD1-201ENST00000342245 M0R2P5 195 aa14.25□□□□□ -0.13
SMPD1-201ENST00000342245 C3orf36Q3SXR2 165 aa14.25□□□□□ -0.13
SMPD1-201ENST00000342245 COL27A1Q8IZC6 1860 aaPredicted RBP14.25□□□□□ -0.13
SMPD1-201ENST00000342245 IGHV1-46P01743 117 aa14.25□□□□□ -0.13
SMPD1-201ENST00000342245 CRIP2P52943 208 aaPredicted RBP14.25□□□□□ -0.13
SMPD1-201ENST00000342245 TRPT1Q86TN4 253 aaKnown RBP14.25□□□□□ -0.13
SMPD1-201ENST00000342245 LRRC75A-AS1Q8N1F1 130 aa14.25□□□□□ -0.13
SMPD1-201ENST00000342245 CTSZQ9UBR2 303 aa14.25□□□□□ -0.13
SMPD1-201ENST00000342245 A0A1W2PNU3 283 aaPredicted RBP14.24□□□□□ -0.13
SMPD1-201ENST00000342245 IGHG3P01860 377 aa14.24□□□□□ -0.13
SMPD1-201ENST00000342245 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.24□□□□□ -0.13
SMPD1-201ENST00000342245 SUMO2P61956 95 aaKnown RBP14.24□□□□□ -0.13
SMPD1-201ENST00000342245 C2orf66Q6UXQ4 117 aa14.24□□□□□ -0.13
SMPD1-201ENST00000342245 KLHL30-AS1Q8NEE0 82 aa14.24□□□□□ -0.13
SMPD1-201ENST00000342245 ZDBF2Q9HCK1 2354 aa14.23□□□□□ -0.13
SMPD1-201ENST00000342245 TMEM101Q96IK0 257 aa14.23□□□□□ -0.13
SMPD1-201ENST00000342245 RNF5Q99942 180 aa14.23□□□□□ -0.13
SMPD1-201ENST00000342245 TRAV26-2A0A0B4J265 109 aa14.23□□□□□ -0.13
SMPD1-201ENST00000342245 TMEM263Q8WUH6 116 aaKnown RBP14.23□□□□□ -0.13
SMPD1-201ENST00000342245 SMIM9A6NGZ8 99 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 CFHR4Q92496 578 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 CHCHD5Q9BSY4 110 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 ARRDC1-AS1Q9H2J1 176 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 KLK15Q9H2R5 256 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 IGHV1-69DA0A0B4J2H0 117 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 TEX49A0A1B0GTD5 131 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 A0A1B0GX51 115 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 H3BT86 120 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 PPP1R17O96001 155 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 SPANXN1Q5VSR9 72 aa14.22□□□□□ -0.13
SMPD1-201ENST00000342245 IGHV3-72A0A0B4J1Y9 119 aa14.21□□□□□ -0.13
SMPD1-201ENST00000342245 IGKV3D-20A0A0C4DH25 116 aa14.21□□□□□ -0.13
SMPD1-201ENST00000342245 LINC00694P0DN24 101 aa14.21□□□□□ -0.13
SMPD1-201ENST00000342245 CNTFRP26992 372 aa14.21□□□□□ -0.13
SMPD1-201ENST00000342245 AHCTF1Q8WYP5 2266 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 IGHV7-4-1A0A0J9YVY3 117 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 TRBV30A0A0K0K1B3 111 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 C11orf86A6NJI1 115 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 J3KT08 172 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 M0R1B8 84 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 MFAP4P55083 255 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 DEFB121Q5J5C9 76 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 NDUFB3O43676 98 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 ATP5G1P05496 136 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 ASCL5Q7RTU5 278 aa14.2□□□□□ -0.14
SMPD1-201ENST00000342245 M0R381 172 aa14.19□□□□□ -0.14
SMPD1-201ENST00000342245 NDUFA7O95182 113 aa14.19□□□□□ -0.14
SMPD1-201ENST00000342245 TMEM170BQ5T4T1 132 aa14.19□□□□□ -0.14
SMPD1-201ENST00000342245 A4D1N5 150 aa14.19□□□□□ -0.14
SMPD1-201ENST00000342245 Q6ZS46 218 aa14.19□□□□□ -0.14
SMPD1-201ENST00000342245 C9orf106Q8NAJ2 232 aa14.19□□□□□ -0.14
SMPD1-201ENST00000342245 DLX6P56179 175 aa14.18□□□□□ -0.14
SMPD1-201ENST00000342245 ZNF56Q15929 161 aa14.18□□□□□ -0.14
SMPD1-201ENST00000342245 GFRALQ6UXV0 394 aa14.18□□□□□ -0.14
SMPD1-201ENST00000342245 ACYP1P07311 99 aa14.18□□□□□ -0.14
SMPD1-201ENST00000342245 IGHV1-8P0DP01 117 aa14.18□□□□□ -0.14
SMPD1-201ENST00000342245 C2orf82Q6UX34 121 aa14.18□□□□□ -0.14
SMPD1-201ENST00000342245 DYNAPQ8N1N2 210 aa14.18□□□□□ -0.14
SMPD1-201ENST00000342245 C3orf22Q8N5N4 141 aa14.18□□□□□ -0.14
SMPD1-201ENST00000342245 TRAV25A0A0B4J276 109 aa14.17□□□□□ -0.14
SMPD1-201ENST00000342245 EBI3Q14213 229 aa14.17□□□□□ -0.14
SMPD1-201ENST00000342245 PMVKQ15126 192 aa14.17□□□□□ -0.14
SMPD1-201ENST00000342245 IGLV4-69A0A075B6H9 119 aa14.17□□□□□ -0.14
SMPD1-201ENST00000342245 UQCRQO14949 82 aa14.17□□□□□ -0.14
SMPD1-201ENST00000342245 LGALS3P17931 250 aaKnown RBP14.17□□□□□ -0.14
SMPD1-201ENST00000342245 Q1RN00 199 aa14.17□□□□□ -0.14
SMPD1-201ENST00000342245 C9orf153Q5TBE3 101 aa14.17□□□□□ -0.14
SMPD1-201ENST00000342245 TMEM141Q96I45 108 aa14.17□□□□□ -0.14
SMPD1-201ENST00000342245 CITED2Q99967 270 aaPredicted RBP14.17□□□□□ -0.14
SMPD1-201ENST00000342245 IGHV1-3A0A0C4DH29 117 aa14.16□□□□□ -0.14
SMPD1-201ENST00000342245 TECTAO75443 2155 aa14.16□□□□□ -0.14
SMPD1-201ENST00000342245 GPR179Q6PRD1 2367 aa14.16□□□□□ -0.14
SMPD1-201ENST00000342245 NPFFO15130 113 aa14.16□□□□□ -0.14
SMPD1-201ENST00000342245 CRYGDP07320 174 aa14.16□□□□□ -0.14
SMPD1-201ENST00000342245 TCF15Q12870 199 aa14.16□□□□□ -0.14
SMPD1-201ENST00000342245 RPS28P62857 69 aaKnown RBP14.15□□□□□ -0.14
SMPD1-201ENST00000342245 IGFBPL1Q8WX77 278 aa14.15□□□□□ -0.14
SMPD1-201ENST00000342245 SMAD5-AS1Q9Y6J3 95 aa14.15□□□□□ -0.14
SMPD1-201ENST00000342245 INTS1Q8N201 2190 aaKnown RBP14.15□□□□□ -0.14
SMPD1-201ENST00000342245 J3QQQ9 107 aa14.15□□□□□ -0.14
SMPD1-201ENST00000342245 MED13Q9UHV7 2174 aa14.15□□□□□ -0.15
SMPD1-201ENST00000342245 IGHV4-39P01824 125 aa14.14□□□□□ -0.15
SMPD1-201ENST00000342245 ATP1A1-AS1Q5TC04 95 aa14.14□□□□□ -0.15
SMPD1-201ENST00000342245 IGF2-ASQ6U949 168 aa14.14□□□□□ -0.15
SMPD1-201ENST00000342245 ARFGEF3Q5TH69 2177 aa14.14□□□□□ -0.15
SMPD1-201ENST00000342245 AMELXQ99217 191 aa14.14□□□□□ -0.15
SMPD1-201ENST00000342245 DPH3P1Q9H4G8 78 aa14.14□□□□□ -0.15
SMPD1-201ENST00000342245 PLXNB1O43157 2135 aa14.13□□□□□ -0.15
SMPD1-201ENST00000342245 SVILO95425 2214 aa14.13□□□□□ -0.15
SMPD1-201ENST00000342245 POM121L12Q8N7R1 296 aa14.13□□□□□ -0.15
SMPD1-201ENST00000342245 C3orf56Q8N813 242 aa14.13□□□□□ -0.15
SMPD1-201ENST00000342245 LINC00526Q96FQ7 95 aa14.13□□□□□ -0.15
SMPD1-201ENST00000342245 C11orf21Q9P2W6 132 aa14.13□□□□□ -0.15
SMPD1-201ENST00000342245 COX6CP09669 75 aa14.13□□□□□ -0.15
SMPD1-201ENST00000342245 DEFB123Q8N688 67 aa14.13□□□□□ -0.15
SMPD1-201ENST00000342245 OR13C6PQ8NH95 151 aa14.13□□□□□ -0.15
SMPD1-201ENST00000342245 CD3EP07766 207 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms