RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 STHQ8IWL8 128 aa11.61□□□□□ -0.55
RRP1B-201ENST00000340648 PRO1854Q9UHT4 67 aa11.61□□□□□ -0.55
RRP1B-201ENST00000340648 INS-IGF2F8WCM5 200 aa11.61□□□□□ -0.55
RRP1B-201ENST00000340648 SPATA12Q7Z6I5 190 aa11.61□□□□□ -0.55
RRP1B-201ENST00000340648 TEX22C9J3V5 150 aa11.6□□□□□ -0.55
RRP1B-201ENST00000340648 WFDC2Q14508 124 aa11.6□□□□□ -0.55
RRP1B-201ENST00000340648 ARFGEF3Q5TH69 2177 aa11.6□□□□□ -0.55
RRP1B-201ENST00000340648 RBMY1BA6NDE4 496 aaKnown RBP11.6□□□□□ -0.55
RRP1B-201ENST00000340648 RBMY1EA6NEQ0 496 aaKnown RBP11.6□□□□□ -0.55
RRP1B-201ENST00000340648 RBMY1DP0C7P1 496 aaKnown RBP11.6□□□□□ -0.55
RRP1B-201ENST00000340648 RBMY1A1P0DJD3 496 aaKnown RBP11.6□□□□□ -0.55
RRP1B-201ENST00000340648 RBMY1CP0DJD4 496 aa11.6□□□□□ -0.55
RRP1B-201ENST00000340648 SPINK13Q1W4C9 94 aa11.6□□□□□ -0.55
RRP1B-201ENST00000340648 ZNF625Q96I27 306 aaPredicted RBP11.6□□□□□ -0.55
RRP1B-201ENST00000340648 SPRY4Q9C004 299 aa11.6□□□□□ -0.55
RRP1B-201ENST00000340648 SHISA9B4DS77 424 aa11.6□□□□□ -0.55
RRP1B-201ENST00000340648 MBD6Q96DN6 1003 aa11.6□□□□□ -0.55
RRP1B-201ENST00000340648 C20orf78Q9BR46 151 aa11.6□□□□□ -0.55
RRP1B-201ENST00000340648 SEM1Q6ZVN7 128 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 TRAV12-2A0A075B6T6 113 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 ADARB2-AS1A8MUL3 147 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 F6UB75 175 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 NCKAP5O14513 1909 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 H3BMM0 161 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 CGB3P0DN86 165 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 CGB7P0DN87 165 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 UBE2WQ96B02 151 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 C1orf159Q96HA4 380 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 J3QQQ9 107 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 LINC00158P58513 81 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 FOXI2Q6ZQN5 318 aa11.59□□□□□ -0.55
RRP1B-201ENST00000340648 GNRH2O43555 120 aa11.58□□□□□ -0.55
RRP1B-201ENST00000340648 IGHV3-53P01767 116 aa11.58□□□□□ -0.56
RRP1B-201ENST00000340648 C11orf44Q8N8P7 122 aa11.58□□□□□ -0.56
RRP1B-201ENST00000340648 TRAV13-1A0A0B4J241 112 aa11.58□□□□□ -0.56
RRP1B-201ENST00000340648 SLC25A20O43772 301 aa11.58□□□□□ -0.56
RRP1B-201ENST00000340648 RPL39LQ96EH5 51 aaKnown RBP11.58□□□□□ -0.56
RRP1B-201ENST00000340648 TNRC6AQ8NDV7 1962 aaKnown RBP11.58□□□□□ -0.56
RRP1B-201ENST00000340648 PRAC2D3DTV9 90 aa11.58□□□□□ -0.56
RRP1B-201ENST00000340648 CENPFP49454 3210 aa11.58□□□□□ -0.56
RRP1B-201ENST00000340648 IGLV11-55A0A075B6I3 123 aa11.57□□□□□ -0.56
RRP1B-201ENST00000340648 SYNJ2BPP57105 145 aa11.57□□□□□ -0.56
RRP1B-201ENST00000340648 ZNF415Q09FC8 603 aa11.57□□□□□ -0.56
RRP1B-201ENST00000340648 IGFL2Q6UWQ7 119 aa11.57□□□□□ -0.56
RRP1B-201ENST00000340648 CRYGCP07315 174 aa11.57□□□□□ -0.56
RRP1B-201ENST00000340648 CTSGP08311 255 aa11.57□□□□□ -0.56
RRP1B-201ENST00000340648 PIP4P2Q8N4L2 257 aa11.57□□□□□ -0.56
RRP1B-201ENST00000340648 TRGV1A0A0A0MS02 117 aa11.56□□□□□ -0.56
RRP1B-201ENST00000340648 MLST8Q9BVC4 326 aa11.56□□□□□ -0.56
RRP1B-201ENST00000340648 DNAH12Q6ZR08 3092 aa11.56□□□□□ -0.56
RRP1B-201ENST00000340648 LINC00310P59036 64 aa11.56□□□□□ -0.56
RRP1B-201ENST00000340648 RASL10AQ92737 203 aa11.56□□□□□ -0.56
RRP1B-201ENST00000340648 I3L3M4 83 aa11.56□□□□□ -0.56
RRP1B-201ENST00000340648 PRIMA1Q86XR5 153 aa11.56□□□□□ -0.56
RRP1B-201ENST00000340648 MSRB2Q9Y3D2 182 aa11.56□□□□□ -0.56
RRP1B-201ENST00000340648 G3V4G9 280 aa11.56□□□□□ -0.56
RRP1B-201ENST00000340648 CRPP02741 224 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 GATD1Q8NB37 220 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 CHCHD5Q9BSY4 110 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 C11orf68Q9H3H3 251 aaKnown RBP11.55□□□□□ -0.56
RRP1B-201ENST00000340648 TRGV4A0A0C4DH28 118 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 RBAKDNA6NC62 111 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 NDUFA4O00483 81 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 RBX1P62877 108 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 ODF1Q14990 250 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 WI2-2373I1.2A0A1W2PRP0 233 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 Q8N7P7 452 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 KLHL30-AS1Q8NEE0 82 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 HIGD1BQ9P298 99 aa11.55□□□□□ -0.56
RRP1B-201ENST00000340648 C1QTNF4Q9BXJ3 329 aa11.54□□□□□ -0.56
RRP1B-201ENST00000340648 GRNP28799 593 aaKnown RBP11.54□□□□□ -0.56
RRP1B-201ENST00000340648 RPL36AP83881 106 aaKnown RBP11.54□□□□□ -0.56
RRP1B-201ENST00000340648 ZNF493Q6ZR52 646 aa11.54□□□□□ -0.56
RRP1B-201ENST00000340648 RPL36ALQ969Q0 106 aaKnown RBP11.54□□□□□ -0.56
RRP1B-201ENST00000340648 IGLV1-47P01700 117 aa11.54□□□□□ -0.56
RRP1B-201ENST00000340648 NTN5Q8WTR8 489 aaPredicted RBP11.54□□□□□ -0.56
RRP1B-201ENST00000340648 DEFB131AP59861 70 aa11.54□□□□□ -0.56
RRP1B-201ENST00000340648 NDUFA12Q9UI09 145 aa11.54□□□□□ -0.56
RRP1B-201ENST00000340648 IGHV1OR15-1A0A075B7D0 117 aa11.53□□□□□ -0.56
RRP1B-201ENST00000340648 IGHV7-81A0A0B4J1V7 117 aa11.53□□□□□ -0.56
RRP1B-201ENST00000340648 RNASE13Q5GAN3 156 aaKnown RBP11.53□□□□□ -0.56
RRP1B-201ENST00000340648 IGHV3-16A0A0C4DH30 117 aa11.53□□□□□ -0.56
RRP1B-201ENST00000340648 CFAP161Q6P656 301 aa11.53□□□□□ -0.56
RRP1B-201ENST00000340648 NPBQ8NG41 125 aa11.53□□□□□ -0.56
RRP1B-201ENST00000340648 PAX4O43316 350 aa11.53□□□□□ -0.56
RRP1B-201ENST00000340648 UBE2E2Q96LR5 201 aa11.53□□□□□ -0.56
RRP1B-201ENST00000340648 HOXB4P17483 251 aaPredicted RBP11.52□□□□□ -0.56
RRP1B-201ENST00000340648 GAGE2AQ6NT46 116 aa11.52□□□□□ -0.56
RRP1B-201ENST00000340648 DYSFO75923 2080 aa11.52□□□□□ -0.56
RRP1B-201ENST00000340648 IGHV1-69DA0A0B4J2H0 117 aa11.52□□□□□ -0.57
RRP1B-201ENST00000340648 TRBV6-1A0A0K0K1D8 114 aa11.52□□□□□ -0.57
RRP1B-201ENST00000340648 IGHV1-69P01742 117 aa11.52□□□□□ -0.57
RRP1B-201ENST00000340648 IGHV3-38A0A0C4DH36 116 aa11.52□□□□□ -0.57
RRP1B-201ENST00000340648 BUB3O43684 328 aa11.52□□□□□ -0.57
RRP1B-201ENST00000340648 TTC28Q96AY4 2481 aa11.52□□□□□ -0.57
RRP1B-201ENST00000340648 EML5Q05BV3 1969 aa11.51□□□□□ -0.57
RRP1B-201ENST00000340648 LEPROTO15243 131 aa11.51□□□□□ -0.57
RRP1B-201ENST00000340648 CFC1BP0CG36 223 aa11.51□□□□□ -0.57
RRP1B-201ENST00000340648 CFC1P0CG37 223 aa11.51□□□□□ -0.57
RRP1B-201ENST00000340648 MRPL53Q96EL3 112 aaKnown RBP11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms