RNA–Protein interactions for RNA: ENST00000340437.8

CPSF7-201, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 1 (best) BASIC

Gene CPSF7, Length 3,695 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-201ENST00000340437 NXT2Q9NPJ8 142 aaKnown RBP11.08□□□□□ -0.63
CPSF7-201ENST00000340437 SCGB2A2Q13296 93 aa11.08□□□□□ -0.64
CPSF7-201ENST00000340437 K7EP34 96 aa11.08□□□□□ -0.64
CPSF7-201ENST00000340437 DPM2O94777 84 aa11.08□□□□□ -0.64
CPSF7-201ENST00000340437 ADORA2A-AS1P86434 159 aa11.08□□□□□ -0.64
CPSF7-201ENST00000340437 C8orf86Q6ZUL3 223 aa11.08□□□□□ -0.64
CPSF7-201ENST00000340437 NEGR1Q7Z3B1 354 aa11.08□□□□□ -0.64
CPSF7-201ENST00000340437 GATD1Q8NB37 220 aa11.08□□□□□ -0.64
CPSF7-201ENST00000340437 A0A1W2PPM0 123 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 IGKV3-20P01619 116 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 ZNF502Q8TBZ5 544 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 DUX5Q96PT3 197 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 F6UB75 175 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 ZNF575Q86XF7 245 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 HIST1H4GQ99525 98 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 DOPEY1Q5JWR5 2465 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 TRBV25-1A0A075B6N4 114 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 PPBPP02775 128 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 EMP1P54849 157 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 C14orf178Q8N769 122 aaPredicted RBP11.07□□□□□ -0.64
CPSF7-201ENST00000340437 NRGNQ92686 78 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 CCDC140Q96MF4 163 aa11.07□□□□□ -0.64
CPSF7-201ENST00000340437 A0A1W2PPR1 153 aa11.06□□□□□ -0.64
CPSF7-201ENST00000340437 AMTNQ6UX39 209 aa11.06□□□□□ -0.64
CPSF7-201ENST00000340437 MAPKAPK5-AS1Q8N8E1 139 aa11.06□□□□□ -0.64
CPSF7-201ENST00000340437 BPESC1Q9GZL8 116 aa11.06□□□□□ -0.64
CPSF7-201ENST00000340437 UTP20O75691 2785 aaKnown RBP11.06□□□□□ -0.64
CPSF7-201ENST00000340437 GNLYP22749 145 aa11.06□□□□□ -0.64
CPSF7-201ENST00000340437 LAGE3Q14657 143 aa11.05□□□□□ -0.64
CPSF7-201ENST00000340437 EEF1AKMT3Q96AZ1 226 aa11.05□□□□□ -0.64
CPSF7-201ENST00000340437 ATP5G2Q06055 141 aa11.05□□□□□ -0.64
CPSF7-201ENST00000340437 PAX8Q06710 450 aa11.05□□□□□ -0.64
CPSF7-201ENST00000340437 HHLA3Q9XRX5 114 aa11.05□□□□□ -0.64
CPSF7-201ENST00000340437 TRBV12-3P01733 135 aa11.05□□□□□ -0.64
CPSF7-201ENST00000340437 RNASE4P34096 147 aaKnown RBP11.05□□□□□ -0.64
CPSF7-201ENST00000340437 ZFAND3Q9H8U3 227 aa11.05□□□□□ -0.64
CPSF7-201ENST00000340437 KLRB1Q12918 225 aa11.04□□□□□ -0.64
CPSF7-201ENST00000340437 Q8N8P6 123 aa11.04□□□□□ -0.64
CPSF7-201ENST00000340437 FAM110DQ8TAY7 271 aaPredicted RBP11.04□□□□□ -0.64
CPSF7-201ENST00000340437 PRR9Q5T870 116 aa11.04□□□□□ -0.64
CPSF7-201ENST00000340437 RPL39LQ96EH5 51 aaKnown RBP11.04□□□□□ -0.64
CPSF7-201ENST00000340437 ZFHX3Q15911 3703 aa11.04□□□□□ -0.64
CPSF7-201ENST00000340437 TRAV8-2A0A0B4J237 113 aa11.04□□□□□ -0.64
CPSF7-201ENST00000340437 CLPSL1A2RUU4 121 aa11.04□□□□□ -0.64
CPSF7-201ENST00000340437 LINC01559Q495D7 138 aa11.03□□□□□ -0.64
CPSF7-201ENST00000340437 SCGB3A1Q96QR1 104 aa11.03□□□□□ -0.64
CPSF7-201ENST00000340437 SLC50A1Q9BRV3 221 aa11.03□□□□□ -0.64
CPSF7-201ENST00000340437 PHLDA3Q9Y5J5 127 aa11.03□□□□□ -0.64
CPSF7-201ENST00000340437 CYSLTR1Q9Y271 337 aa11.03□□□□□ -0.64
CPSF7-201ENST00000340437 ANKRD17O75179 2603 aaKnown RBP11.03□□□□□ -0.64
CPSF7-201ENST00000340437 UFSP1Q6NVU6 142 aa11.03□□□□□ -0.64
CPSF7-201ENST00000340437 Q8N6K4 173 aa11.03□□□□□ -0.64
CPSF7-201ENST00000340437 CSTL1Q9H114 145 aa11.03□□□□□ -0.64
CPSF7-201ENST00000340437 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.02□□□□□ -0.64
CPSF7-201ENST00000340437 ARL3P36405 182 aa11.02□□□□□ -0.64
CPSF7-201ENST00000340437 UNQ9165/PRO28630Q6UXU0 137 aa11.02□□□□□ -0.64
CPSF7-201ENST00000340437 PRRC2AP48634 2157 aaKnown RBP11.02□□□□□ -0.65
CPSF7-201ENST00000340437 GNRH2O43555 120 aa11.02□□□□□ -0.65
CPSF7-201ENST00000340437 PF4V1P10720 104 aa11.02□□□□□ -0.65
CPSF7-201ENST00000340437 MINOS1Q5TGZ0 78 aa11.02□□□□□ -0.65
CPSF7-201ENST00000340437 DPF1Q92782 380 aa11.02□□□□□ -0.65
CPSF7-201ENST00000340437 MINOS1-NBL1R4GNA1 71 aa11.02□□□□□ -0.65
CPSF7-201ENST00000340437 ATP5LO75964 103 aa11.02□□□□□ -0.65
CPSF7-201ENST00000340437 SRSF1Q07955 248 aaKnown RBP eCLIP11.02□□□□□ -0.65
CPSF7-201ENST00000340437 C20orf173Q96LM9 149 aa11.02□□□□□ -0.65
CPSF7-201ENST00000340437 ZNF48Q96MX3 618 aaPredicted RBP11.02□□□□□ -0.65
CPSF7-201ENST00000340437 TEX48A0A1B0GUV7 120 aa11.01□□□□□ -0.65
CPSF7-201ENST00000340437 F5H697 171 aa11.01□□□□□ -0.65
CPSF7-201ENST00000340437 H3BMG7 143 aa11.01□□□□□ -0.65
CPSF7-201ENST00000340437 NPFFR1Q9GZQ6 430 aa11□□□□□ -0.65
CPSF7-201ENST00000340437 SIRPDQ9H106 197 aa11□□□□□ -0.65
CPSF7-201ENST00000340437 ITPR1Q14643 2758 aa11□□□□□ -0.65
CPSF7-201ENST00000340437 SIVA1O15304 175 aa11□□□□□ -0.65
CPSF7-201ENST00000340437 SCGB1D4Q6XE38 83 aa11□□□□□ -0.65
CPSF7-201ENST00000340437 IGHV7-4-1A0A0J9YVY3 117 aa11□□□□□ -0.65
CPSF7-201ENST00000340437 SH2D6Q7Z4S9 175 aa11□□□□□ -0.65
CPSF7-201ENST00000340437 ATP5J2P56134 94 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 WFDC2Q14508 124 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 HIST2H2BDQ6DRA6 164 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 CEND1Q8N111 149 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 OR10J6PQ8NGY7 276 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 GTSF1LQ9H1H1 148 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 TRAV41A0A0B4J266 112 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 NPFFO15130 113 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 RAB9AP51151 201 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 UBE2E1P51965 193 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 ZNF479Q96JC4 524 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 CENPVL3A0A0U1RRI6 287 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 OR11H12B2RN74 326 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 TGFAP01135 160 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 ANXA2RQ3ZCQ2 193 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 CD300EQ496F6 205 aaPredicted RBP10.99□□□□□ -0.65
CPSF7-201ENST00000340437 C11orf71Q6IPW1 123 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 NRACQ8N912 160 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 OR11H1Q8NG94 326 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 OR11H2Q8NH07 326 aa10.99□□□□□ -0.65
CPSF7-201ENST00000340437 CHTOPQ9Y3Y2 248 aaKnown RBP10.99□□□□□ -0.65
CPSF7-201ENST00000340437 FAM74A4Q5TZK3 123 aa10.98□□□□□ -0.65
CPSF7-201ENST00000340437 ZANQ9Y493 2812 aa10.98□□□□□ -0.65
CPSF7-201ENST00000340437 G3V4G9 280 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.1 ms