RNA–Protein interactions for RNA: ENST00000340209.8

RBFOX1-202, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-202ENST00000340209 SMPXQ9UHP9 88 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 PHLDA3Q9Y5J5 127 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 A0A096LNT2 108 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 IGKV3D-20A0A0C4DH25 116 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 J3QLI3 93 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 MRPL51Q4U2R6 128 aaKnown RBP7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 EBLN2Q6P2I7 272 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 IGHV1-24A0A0C4DH33 117 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 C1orf194Q5T5A4 169 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 LINC00477Q96M19 166 aa7.72□□□□□ -1.17
RBFOX1-202ENST00000340209 KNCNA6PVL3 124 aa7.71□□□□□ -1.17
RBFOX1-202ENST00000340209 NPYP01303 97 aa7.71□□□□□ -1.17
RBFOX1-202ENST00000340209 ORMDL3Q8N138 153 aa7.71□□□□□ -1.17
RBFOX1-202ENST00000340209 GFRA4Q9GZZ7 299 aa7.71□□□□□ -1.17
RBFOX1-202ENST00000340209 NPIPB6E9PJ23 425 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 OR5AL1P0C617 328 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 TCTEX1D4Q5JR98 221 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 C14orf178Q8N769 122 aaPredicted RBP7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 MS4A6AQ9H2W1 248 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 ZNF702PQ9H963 129 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 PRM2P04554 102 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 CD7P09564 240 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 PSMB8P28062 276 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 ID1P41134 155 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 ANXA2RQ3ZCQ2 193 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 Q6YL49 198 aa7.71□□□□□ -1.18
RBFOX1-202ENST00000340209 F8P00451 2351 aa7.7□□□□□ -1.18
RBFOX1-202ENST00000340209 hDV102S1A0JD36 115 aa7.7□□□□□ -1.18
RBFOX1-202ENST00000340209 IGLV1-40P01703 118 aa7.7□□□□□ -1.18
RBFOX1-202ENST00000340209 GPHB5Q86YW7 130 aa7.7□□□□□ -1.18
RBFOX1-202ENST00000340209 NSUN5P1Q3KNT7 163 aa7.7□□□□□ -1.18
RBFOX1-202ENST00000340209 Q6ZN92 141 aa7.7□□□□□ -1.18
RBFOX1-202ENST00000340209 A0A087WWL8 130 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 C19orf54Q5BKX5 351 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 FAM104BQ5XKR9 115 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 RASL11AQ6T310 242 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 NEGR1Q7Z3B1 354 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 URB1-AS1Q96HZ7 61 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 A0A1B0GV90 55 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 SNRPD3P62318 126 aaKnown RBP7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 DNAJC9-AS1A6NH13 148 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 OR4C46A6NHA9 309 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 EREGO14944 169 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 TCAPO15273 167 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 DEFB131AP59861 70 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 RPS20P60866 119 aaKnown RBP7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 FAM159AQ6UWV7 190 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 TMEM70Q9BUB7 260 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 SIGLEC8Q9NYZ4 499 aa7.69□□□□□ -1.18
RBFOX1-202ENST00000340209 A0A087X0K7 114 aa7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 IGHV3-73A0A0B4J1V6 119 aa7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 Q6AWC8 147 aa7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 SPATA12Q7Z6I5 190 aa7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 APRG1Q8IVJ8 170 aa7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 MAP1LC3CQ9BXW4 147 aa7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 JPT2Q9H910 190 aa7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 NBEAL2Q6ZNJ1 2754 aa7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 LGALS1P09382 135 aaKnown RBP7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 ASIPP42127 132 aa7.68□□□□□ -1.18
RBFOX1-202ENST00000340209 TRAV21A0A0B4J279 112 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 C20orf202A1L168 122 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 HSBP1L1C9JCN9 74 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 OVOL1O14753 267 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 FAM231BA6NCW3 169 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 H3BUA1 57 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 SVIPQ8NHG7 77 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 U3KQE9 123 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 PRSS1P07477 247 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 SMIM17P0DL12 118 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 HNRNPA3P51991 378 aaKnown RBP7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 MAP1LC3AQ9H492 121 aa7.67□□□□□ -1.18
RBFOX1-202ENST00000340209 ERASQ7Z444 233 aa7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 FBLL1A6NHQ2 334 aaKnown RBP7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 C2orf70A6NJV1 201 aa7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 LEPP41159 167 aa7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 CACNG7P62955 275 aa7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 OR1N2Q8NGR9 330 aa7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 DLX4Q92988 240 aaPredicted RBP7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 TMEM208Q9BTX3 173 aa7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 HINT1P49773 126 aaPredicted RBP7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 Q6ZSV7 163 aa7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 ESM1Q9NQ30 184 aa7.66□□□□□ -1.18
RBFOX1-202ENST00000340209 TNFRSF6BO95407 300 aa7.65□□□□□ -1.18
RBFOX1-202ENST00000340209 REC114Q7Z4M0 266 aa7.65□□□□□ -1.18
RBFOX1-202ENST00000340209 KRTAP1-3Q8IUG1 177 aa7.65□□□□□ -1.18
RBFOX1-202ENST00000340209 ZFAND2AQ8N6M9 145 aa7.65□□□□□ -1.18
RBFOX1-202ENST00000340209 CD28P10747 220 aa7.65□□□□□ -1.18
RBFOX1-202ENST00000340209 CFHR3Q02985 330 aa7.65□□□□□ -1.18
RBFOX1-202ENST00000340209 C9orf47Q6ZRZ4 202 aa7.65□□□□□ -1.18
RBFOX1-202ENST00000340209 TMEM61Q8N0U2 210 aa7.65□□□□□ -1.18
RBFOX1-202ENST00000340209 TRBV6-1A0A0K0K1D8 114 aa7.65□□□□□ -1.19
RBFOX1-202ENST00000340209 ELANEP08246 267 aa7.65□□□□□ -1.19
RBFOX1-202ENST00000340209 CRIP2P52943 208 aaPredicted RBP7.65□□□□□ -1.19
RBFOX1-202ENST00000340209 KLF5Q13887 457 aaPredicted RBP7.65□□□□□ -1.19
RBFOX1-202ENST00000340209 CFAP161Q6P656 301 aa7.65□□□□□ -1.19
RBFOX1-202ENST00000340209 RPL39LQ96EH5 51 aaKnown RBP7.65□□□□□ -1.19
RBFOX1-202ENST00000340209 SYS1-DBNDD2H3BUS1 97 aa7.64□□□□□ -1.19
RBFOX1-202ENST00000340209 IGLC6P0CF74 106 aa7.64□□□□□ -1.19
RBFOX1-202ENST00000340209 NDUFAF3Q9BU61 184 aa7.64□□□□□ -1.19
RBFOX1-202ENST00000340209 HSPB8Q9UJY1 196 aa7.64□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms