RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 TYMSP04818 313 aa11.9□□□□□ -0.5
SFN-201ENST00000339276 TCL1AP56279 114 aa11.9□□□□□ -0.5
SFN-201ENST00000339276 CASC10Q5T4H9 136 aa11.9□□□□□ -0.5
SFN-201ENST00000339276 PHLDA1Q8WV24 401 aaPredicted RBP11.9□□□□□ -0.5
SFN-201ENST00000339276 MLST8Q9BVC4 326 aa11.9□□□□□ -0.5
SFN-201ENST00000339276 MDFICQ9P1T7 246 aa11.9□□□□□ -0.5
SFN-201ENST00000339276 FABP5P3A8MUU1 101 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 DEFB130BP0DP73 79 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 DEFB130AP0DP74 79 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 DAD1P61803 113 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 ZNF415Q09FC8 603 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 ZNF674Q2M3X9 581 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 FAM162BQ5T6X4 162 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 KCNS1Q96KK3 526 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 SDF2L1Q9HCN8 221 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 STARD9Q9P2P6 4700 aa11.89□□□□□ -0.51
SFN-201ENST00000339276 TRBV20OR9-2A0A075B6H5 130 aa11.88□□□□□ -0.51
SFN-201ENST00000339276 TMEM250H0YL14 139 aa11.88□□□□□ -0.51
SFN-201ENST00000339276 DAZ2Q13117 558 aaKnown RBP11.88□□□□□ -0.51
SFN-201ENST00000339276 CSMD3Q7Z407 3707 aa11.88□□□□□ -0.51
SFN-201ENST00000339276 IGKV3D-20A0A0C4DH25 116 aa11.87□□□□□ -0.51
SFN-201ENST00000339276 IGHV3-16A0A0C4DH30 117 aa11.87□□□□□ -0.51
SFN-201ENST00000339276 PGPEP1LA6NFU8 196 aa11.87□□□□□ -0.51
SFN-201ENST00000339276 IGLV2-8P01709 118 aa11.87□□□□□ -0.51
SFN-201ENST00000339276 GNG4P50150 75 aa11.87□□□□□ -0.51
SFN-201ENST00000339276 CEBPGP53567 150 aa11.87□□□□□ -0.51
SFN-201ENST00000339276 PRR27Q6MZM9 219 aa11.87□□□□□ -0.51
SFN-201ENST00000339276 Q6ZTI0 123 aa11.87□□□□□ -0.51
SFN-201ENST00000339276 PARLQ9H300 379 aa11.87□□□□□ -0.51
SFN-201ENST00000339276 TRAV10A0A0B4J240 114 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 GAGE12BA1L429 117 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 NUPR2A6NF83 97 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 M0R036 132 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 GAGE7O76087 117 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 ORM1P02763 201 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 GAGE12FP0CL80 117 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 GAGE12GP0CL81 117 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 GAGE12IP0CL82 117 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 RAB14P61106 215 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 CEMP1Q6PRD7 247 aaPredicted RBP11.86□□□□□ -0.51
SFN-201ENST00000339276 LINC00612Q8N6U2 182 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 TRGV1A0A0A0MS02 117 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 SPINK4O60575 86 aa11.86□□□□□ -0.51
SFN-201ENST00000339276 SRP19P09132 144 aaKnown RBP11.86□□□□□ -0.51
SFN-201ENST00000339276 MGST1P10620 155 aaKnown RBP11.86□□□□□ -0.51
SFN-201ENST00000339276 SRSF3P84103 164 aaKnown RBP11.86□□□□□ -0.51
SFN-201ENST00000339276 MRPL16Q9NX20 251 aaKnown RBP11.86□□□□□ -0.51
SFN-201ENST00000339276 DEFB131BA0A096LNP1 70 aa11.85□□□□□ -0.51
SFN-201ENST00000339276 B4DEV8 164 aa11.85□□□□□ -0.51
SFN-201ENST00000339276 KRBOX1C9JBD0 128 aa11.85□□□□□ -0.51
SFN-201ENST00000339276 NDUFS6O75380 124 aaKnown RBP11.85□□□□□ -0.51
SFN-201ENST00000339276 HTN3P15516 51 aa11.85□□□□□ -0.51
SFN-201ENST00000339276 SMIM12Q96EX1 92 aa11.85□□□□□ -0.51
SFN-201ENST00000339276 TMSB15BA0A087X1C1 80 aa11.84□□□□□ -0.51
SFN-201ENST00000339276 C9JCJ5 164 aa11.84□□□□□ -0.51
SFN-201ENST00000339276 C9JQL5 133 aa11.84□□□□□ -0.51
SFN-201ENST00000339276 LINC01559Q495D7 138 aa11.84□□□□□ -0.51
SFN-201ENST00000339276 CLLU1Q5K131 121 aa11.84□□□□□ -0.51
SFN-201ENST00000339276 SPXQ9BT56 116 aa11.84□□□□□ -0.51
SFN-201ENST00000339276 DYNC2H1Q8NCM8 4307 aaKnown RBP11.83□□□□□ -0.52
SFN-201ENST00000339276 GRIFINA4D1Z8 144 aa11.83□□□□□ -0.52
SFN-201ENST00000339276 RNASE3P12724 160 aaKnown RBP11.83□□□□□ -0.52
SFN-201ENST00000339276 RPL19P84098 196 aaKnown RBP11.83□□□□□ -0.52
SFN-201ENST00000339276 ZNF575Q86XF7 245 aa11.83□□□□□ -0.52
SFN-201ENST00000339276 C9orf85Q96MD7 179 aa11.83□□□□□ -0.52
SFN-201ENST00000339276 TRGV2A0A075B6R0 118 aa11.82□□□□□ -0.52
SFN-201ENST00000339276 ATP5G1P05496 136 aa11.82□□□□□ -0.52
SFN-201ENST00000339276 ASIPP42127 132 aa11.82□□□□□ -0.52
SFN-201ENST00000339276 OR5I1Q13606 314 aa11.82□□□□□ -0.52
SFN-201ENST00000339276 PEA15Q15121 130 aa11.82□□□□□ -0.52
SFN-201ENST00000339276 LGALS9BQ3B8N2 356 aa11.82□□□□□ -0.52
SFN-201ENST00000339276 OCC1Q8TAD7 63 aa11.82□□□□□ -0.52
SFN-201ENST00000339276 SMIM7Q9BQ49 75 aa11.82□□□□□ -0.52
SFN-201ENST00000339276 KLK5Q9Y337 293 aaPredicted RBP11.82□□□□□ -0.52
SFN-201ENST00000339276 K7EN84 100 aa11.81□□□□□ -0.52
SFN-201ENST00000339276 M0R2P5 195 aa11.81□□□□□ -0.52
SFN-201ENST00000339276 S100A4P26447 101 aaKnown RBP11.81□□□□□ -0.52
SFN-201ENST00000339276 C19orf71A6NCJ1 209 aa11.8□□□□□ -0.52
SFN-201ENST00000339276 ZNF727A8MUV8 499 aa11.8□□□□□ -0.52
SFN-201ENST00000339276 IGLL5B9A064 214 aa11.8□□□□□ -0.52
SFN-201ENST00000339276 H3BVH4 76 aa11.8□□□□□ -0.52
SFN-201ENST00000339276 RASL10AQ92737 203 aa11.8□□□□□ -0.52
SFN-201ENST00000339276 C18orf15Q96N68 181 aa11.8□□□□□ -0.52
SFN-201ENST00000339276 TENM2Q9NT68 2774 aa11.8□□□□□ -0.52
SFN-201ENST00000339276 MUC4Q99102 2169 aa11.79□□□□□ -0.52
SFN-201ENST00000339276 F5H768 121 aa11.79□□□□□ -0.52
SFN-201ENST00000339276 DNLZQ5SXM8 178 aa11.79□□□□□ -0.52
SFN-201ENST00000339276 DAZAP1Q96EP5 407 aaKnown RBP11.79□□□□□ -0.52
SFN-201ENST00000339276 SMDT1Q9H4I9 107 aa11.79□□□□□ -0.52
SFN-201ENST00000339276 BIN3Q9NQY0 253 aa11.79□□□□□ -0.52
SFN-201ENST00000339276 IL36BQ9NZH7 164 aa11.79□□□□□ -0.52
SFN-201ENST00000339276 IGHV4-4A0A075B6R2 117 aa11.78□□□□□ -0.52
SFN-201ENST00000339276 IGHV3-53P01767 116 aa11.78□□□□□ -0.52
SFN-201ENST00000339276 ARMS2P0C7Q2 107 aa11.78□□□□□ -0.52
SFN-201ENST00000339276 HOXA5P20719 270 aa11.78□□□□□ -0.52
SFN-201ENST00000339276 PLECQ15149 4684 aaKnown RBP11.78□□□□□ -0.52
SFN-201ENST00000339276 P01737 135 aa11.77□□□□□ -0.53
SFN-201ENST00000339276 ZNF876PQ49A33 203 aa11.77□□□□□ -0.53
SFN-201ENST00000339276 OR2D3Q8NGH3 330 aa11.77□□□□□ -0.53
SFN-201ENST00000339276 CXCL1P09341 107 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms