RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 SYT8Q8NBV8 401 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 ZNF418Q8TF45 676 aaPredicted RBP9.16□□□□□ -0.94
RBM39-202ENST00000338163 CFHR4Q92496 578 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 CENPEQ02224 2701 aa9.16□□□□□ -0.94
RBM39-202ENST00000338163 TNFRSF13BO14836 293 aaPredicted RBP9.15□□□□□ -0.94
RBM39-202ENST00000338163 ZNF575Q86XF7 245 aa9.15□□□□□ -0.94
RBM39-202ENST00000338163 SPANXN1Q5VSR9 72 aa9.15□□□□□ -0.95
RBM39-202ENST00000338163 IGHV3-49A0A0A0MS15 119 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 SRSF1Q07955 248 aaKnown RBP eCLIP9.14□□□□□ -0.953e-28■■■□□ 14.6
RBM39-202ENST00000338163 SCGB1D4Q6XE38 83 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 ZNF502Q8TBZ5 544 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 TMEM190Q8WZ59 177 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 FANCD2OSQ96PS1 177 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 GEMIN7Q9H840 131 aaKnown RBP9.14□□□□□ -0.95
RBM39-202ENST00000338163 KAAG1Q9UBP8 84 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 SMAD5-AS1Q9Y6J3 95 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 A0A087WX48 190 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 TGFAP01135 160 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 IGHG4P01861 327 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 PLNP26678 52 aa9.14□□□□□ -0.95
RBM39-202ENST00000338163 HOXA3O43365 443 aaPredicted RBP9.13□□□□□ -0.95
RBM39-202ENST00000338163 SPRY2O43597 315 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 THBDP07204 575 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 PSMB2P49721 201 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 LINC01560Q8TB33 94 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 GLMPQ8WWB7 406 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 ITLN2Q8WWU7 325 aaPredicted RBP9.13□□□□□ -0.95
RBM39-202ENST00000338163 TENM4Q6N022 2769 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 SPINK8P0C7L1 97 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 CRYBA4P53673 196 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 KLRD1Q13241 179 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 Q6ZQT7 251 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 PRO0461Q9UI25 63 aa9.13□□□□□ -0.95
RBM39-202ENST00000338163 IGLV2-18A0A075B6J9 118 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 IGKV3D-20A0A0C4DH25 116 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 MYMXA0A1B0GTQ4 84 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 F8W735 103 aaPredicted RBP9.12□□□□□ -0.95
RBM39-202ENST00000338163 SRSF9Q13242 221 aaKnown RBP eCLIP9.12□□□□□ -0.955e-10■■■■□ 22.3
RBM39-202ENST00000338163 TAL2Q16559 108 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 PTH2Q96A98 100 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 MRAP2Q96G30 205 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 CNFNQ9BYD5 112 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 C11orf21Q9P2W6 132 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 CRYBG3Q68DQ2 2970 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 LINC01549A6NIU2 74 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 NDPQ00604 133 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 DEFB104AQ8WTQ1 72 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 HIF1ANQ9NWT6 349 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 FASNP49327 2511 aaKnown RBP9.12□□□□□ -0.95
RBM39-202ENST00000338163 IGLV11-55A0A075B6I3 123 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 TRBV7-3A0A075B6L6 115 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 FOXI1Q12951 378 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 LINC01559Q495D7 138 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 SCGB3A1Q96QR1 104 aa9.12□□□□□ -0.95
RBM39-202ENST00000338163 SRSF8Q9BRL6 282 aaKnown RBP9.12□□□□□ -0.95
RBM39-202ENST00000338163 LINC01546A6NGU7 62 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 F8VRH5 84 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 H7C1H1 209 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 MORN3Q6PF18 240 aaPredicted RBP9.11□□□□□ -0.95
RBM39-202ENST00000338163 COX8CQ7Z4L0 72 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 C1QTNF4Q9BXJ3 329 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 ZNF815PA8K554 130 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 E7EQL1 145 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 H3BVH4 76 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 MT-ATP8P03928 68 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 CTSGP08311 255 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 HLA-DRB4P13762 266 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 C5orf64Q2M2E5 130 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 NRACQ8N912 160 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 DLX4Q92988 240 aaPredicted RBP9.11□□□□□ -0.95
RBM39-202ENST00000338163 DPM3Q9P2X0 92 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 HLA-DRB4X5D2U9 266 aa9.11□□□□□ -0.95
RBM39-202ENST00000338163 USP9YO00507 2555 aaPredicted RBP9.1□□□□□ -0.95
RBM39-202ENST00000338163 LY6HO94772 140 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 FBXL19-AS1Q494R0 122 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 TCTEX1D4Q5JR98 221 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 TMEM78Q5T7P6 136 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 ZFP2Q6ZN57 461 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 C8orf86Q6ZUL3 223 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 NFE4Q86UQ8 179 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 M0R381 172 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 RNF5Q99942 180 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 PRADC1Q9BSG0 188 aa9.1□□□□□ -0.95
RBM39-202ENST00000338163 LGALS1P09382 135 aaKnown RBP9.09□□□□□ -0.95
RBM39-202ENST00000338163 EMP1P54849 157 aa9.09□□□□□ -0.95
RBM39-202ENST00000338163 GCN1Q92616 2671 aaKnown RBP9.09□□□□□ -0.95
RBM39-202ENST00000338163 SCGB2A1O75556 95 aa9.09□□□□□ -0.95
RBM39-202ENST00000338163 AGPAT4-IT1Q9H0P7 198 aa9.09□□□□□ -0.95
RBM39-202ENST00000338163 LY6LH3BQJ8 138 aa9.08□□□□□ -0.96
RBM39-202ENST00000338163 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
RBM39-202ENST00000338163 CFAP126Q5VTH2 177 aa9.08□□□□□ -0.96
RBM39-202ENST00000338163 KLHL30-AS1Q8NEE0 82 aa9.08□□□□□ -0.96
RBM39-202ENST00000338163 AKAP6Q13023 2319 aa9.08□□□□□ -0.96
RBM39-202ENST00000338163 LINC01548A6NM66 108 aa9.08□□□□□ -0.96
RBM39-202ENST00000338163 C19orf84I3L1E1 186 aa9.08□□□□□ -0.96
RBM39-202ENST00000338163 FHL3Q13643 280 aa9.08□□□□□ -0.96
RBM39-202ENST00000338163 SMIM2Q9BVW6 85 aa9.08□□□□□ -0.96
RBM39-202ENST00000338163 SLC25A16P16260 332 aa9.07□□□□□ -0.96
RBM39-202ENST00000338163 XGP55808 180 aa9.07□□□□□ -0.96
RBM39-202ENST00000338163 ECSCRQ19T08 205 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms