RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 SHISA9B4DS77 424 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 COL4A3Q01955 1670 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 GAGE12JA6NER3 117 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 GP9P14770 177 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 GAGE4Q13068 117 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 GAGE5Q13069 117 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 AMTNQ6UX39 209 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 PIP4P1Q86T03 277 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 CEND1Q8N111 149 aa10.82□□□□□ -0.68
RTN4-202ENST00000337526 PRO1854Q9UHT4 67 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 NDUFA12Q9UI09 145 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 K7ERJ3 54 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 TAL2Q16559 108 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 PCP2Q8IVA1 136 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 OR11H6Q8NGC7 330 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 PPDPFLQ8WWR9 84 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 SPAG8Q99932 426 aaPredicted RBP10.81□□□□□ -0.68
RTN4-202ENST00000337526 WDR87Q6ZQQ6 2873 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 FGF6P10767 208 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 SORL1Q92673 2214 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 IGFL2Q6UWQ7 119 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 FAM167A-AS1Q96KT0 104 aa10.81□□□□□ -0.68
RTN4-202ENST00000337526 IGLV2-14P01704 120 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 TCF15Q12870 199 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 NUP210Q8TEM1 1887 aaPredicted RBP10.8□□□□□ -0.68
RTN4-202ENST00000337526 KLF12Q9Y4X4 402 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 IGKV1OR2-108A0A075B7D4 117 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 IGHV7-4-1A0A0J9YVY3 117 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 F6UB75 175 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 J3QQQ9 107 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 K7EIM0 57 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 FOXE3Q13461 319 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 OVOL2Q9BRP0 275 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 SS18Q15532 418 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 DEFB125Q8N687 156 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 ZNRF2Q8NHG8 242 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 VWC2LB2RUY7 222 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 GATA1P15976 413 aaPredicted RBP10.8□□□□□ -0.68
RTN4-202ENST00000337526 GAGE2AQ6NT46 116 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 LINC00173Q6ZV60 143 aa10.8□□□□□ -0.68
RTN4-202ENST00000337526 MYO9AB2RTY4 2548 aa10.79□□□□□ -0.68
RTN4-202ENST00000337526 IGHV3-38A0A0C4DH36 116 aa10.79□□□□□ -0.68
RTN4-202ENST00000337526 PRSS29PA6NIE9 313 aa10.79□□□□□ -0.68
RTN4-202ENST00000337526 I3L2K1 104 aa10.79□□□□□ -0.68
RTN4-202ENST00000337526 GRNP28799 593 aaKnown RBP10.79□□□□□ -0.68
RTN4-202ENST00000337526 CFHR4Q92496 578 aa10.79□□□□□ -0.68
RTN4-202ENST00000337526 LINC01619G3V211 115 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 GNRH2O43555 120 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 IGFBPL1Q8WX77 278 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 RITA1Q96K30 269 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 DNAJC30Q96LL9 226 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 LENEPQ9Y5L5 61 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 H3BMM0 161 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 C12orf74Q32Q52 190 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 ZNF493Q6ZR52 646 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 UBE2WQ96B02 151 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 C11orf1Q9H5F2 150 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 IGF2BP2-AS1Q96M15 143 aa10.78□□□□□ -0.68
RTN4-202ENST00000337526 CCL25O15444 150 aa10.77□□□□□ -0.68
RTN4-202ENST00000337526 CFHR3Q02985 330 aa10.77□□□□□ -0.68
RTN4-202ENST00000337526 MSRB1Q9NZV6 116 aa10.77□□□□□ -0.68
RTN4-202ENST00000337526 AZU1P20160 251 aa10.77□□□□□ -0.69
RTN4-202ENST00000337526 OTOGLQ3ZCN5 2332 aa10.77□□□□□ -0.69
RTN4-202ENST00000337526 KMT2EQ8IZD2 1858 aa10.77□□□□□ -0.69
RTN4-202ENST00000337526 SPRY2O43597 315 aa10.77□□□□□ -0.69
RTN4-202ENST00000337526 PFN2P35080 140 aa10.77□□□□□ -0.69
RTN4-202ENST00000337526 PCNX3Q9H6A9 2034 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 TRBV25-1A0A075B6N4 114 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 FRMD6-AS1P0C7T7 363 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 ZNF48Q96MX3 618 aaPredicted RBP10.76□□□□□ -0.69
RTN4-202ENST00000337526 MED12LQ86YW9 2145 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 ANKRD39Q53RE8 183 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 SP5Q6BEB4 398 aaPredicted RBP10.76□□□□□ -0.69
RTN4-202ENST00000337526 RBAKDNA6NC62 111 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 CTSGP08311 255 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 GTSF1Q8WW33 167 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 CCDC168Q8NDH2 2452 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 PCDH15Q96QU1 1955 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 IGHV7-81A0A0B4J1V7 117 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 CENPVL3A0A0U1RRI6 287 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 GAGE12HA6NDE8 117 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 ATP6V0BQ99437 205 aa10.76□□□□□ -0.69
RTN4-202ENST00000337526 INAFM2P0DMQ5 153 aa10.75□□□□□ -0.69
RTN4-202ENST00000337526 LINC01545Q5VT33 79 aa10.75□□□□□ -0.69
RTN4-202ENST00000337526 MRPL53Q96EL3 112 aaKnown RBP10.75□□□□□ -0.69
RTN4-202ENST00000337526 IGLV11-55A0A075B6I3 123 aa10.75□□□□□ -0.69
RTN4-202ENST00000337526 EDA2RQ9HAV5 297 aa10.75□□□□□ -0.69
RTN4-202ENST00000337526 PIEZO2Q9H5I5 2752 aa10.75□□□□□ -0.69
RTN4-202ENST00000337526 E7EUB6 86 aa10.74□□□□□ -0.69
RTN4-202ENST00000337526 K7EMI3 77 aa10.74□□□□□ -0.69
RTN4-202ENST00000337526 GAGE7O76087 117 aa10.74□□□□□ -0.69
RTN4-202ENST00000337526 GAGE12FP0CL80 117 aa10.74□□□□□ -0.69
RTN4-202ENST00000337526 GAGE12GP0CL81 117 aa10.74□□□□□ -0.69
RTN4-202ENST00000337526 GAGE12IP0CL82 117 aa10.74□□□□□ -0.69
RTN4-202ENST00000337526 HOXB4P17483 251 aaPredicted RBP10.74□□□□□ -0.69
RTN4-202ENST00000337526 SRSF2Q01130 221 aaKnown RBP10.74□□□□□ -0.69
RTN4-202ENST00000337526 INS-IGF2F8WCM5 200 aa10.74□□□□□ -0.69
RTN4-202ENST00000337526 TMEM243Q9BU79 118 aa10.74□□□□□ -0.69
RTN4-202ENST00000337526 MRPL36Q9P0J6 103 aaKnown RBP10.74□□□□□ -0.69
RTN4-202ENST00000337526 CR1LQ2VPA4 569 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms