RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 ALPK3Q96L96 1907 aa11.7□□□□□ -0.54
C9orf47-201ENST00000334490 TNFRSF13BO14836 293 aaPredicted RBP11.7□□□□□ -0.54
C9orf47-201ENST00000334490 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
C9orf47-201ENST00000334490 USP9YO00507 2555 aaPredicted RBP11.7□□□□□ -0.54
C9orf47-201ENST00000334490 IGHV3-38A0A0C4DH36 116 aa11.7□□□□□ -0.54
C9orf47-201ENST00000334490 S100A7L2Q5SY68 101 aa11.7□□□□□ -0.54
C9orf47-201ENST00000334490 PRSS57Q6UWY2 283 aa11.7□□□□□ -0.54
C9orf47-201ENST00000334490 TEX22C9J3V5 150 aa11.7□□□□□ -0.54
C9orf47-201ENST00000334490 PAX4O43316 350 aa11.69□□□□□ -0.54
C9orf47-201ENST00000334490 TNRC6AQ8NDV7 1962 aaKnown RBP11.69□□□□□ -0.54
C9orf47-201ENST00000334490 UBE2CO00762 179 aa11.69□□□□□ -0.54
C9orf47-201ENST00000334490 ASPHD1Q5U4P2 390 aa11.69□□□□□ -0.54
C9orf47-201ENST00000334490 TP53TG1Q9Y2A0 90 aa11.69□□□□□ -0.54
C9orf47-201ENST00000334490 TYMSP04818 313 aa11.69□□□□□ -0.54
C9orf47-201ENST00000334490 ZC2HC1BQ5TFG8 222 aa11.69□□□□□ -0.54
C9orf47-201ENST00000334490 PYGO2Q9BRQ0 406 aa11.69□□□□□ -0.54
C9orf47-201ENST00000334490 JPT2Q9H910 190 aa11.69□□□□□ -0.54
C9orf47-201ENST00000334490 NOP10Q9NPE3 64 aaKnown RBP11.69□□□□□ -0.54
C9orf47-201ENST00000334490 V9GYV3 84 aa11.69□□□□□ -0.54
C9orf47-201ENST00000334490 A0A096LPF7 62 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 TRAV26-2A0A0B4J265 109 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 A6NDX4 124 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 DNAJC9-AS1A6NH13 148 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 LINC00587B1AMM8 73 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 E7EUB6 86 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 CRYGCP07315 174 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 C3orf79P0CE67 100 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 C2orf66Q6UXQ4 117 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 I3L3M4 83 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 BUB3O43684 328 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 SCGB1A1P11684 91 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 NPC2P61916 151 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 PIFOQ8TCI5 191 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 IGF2BP2-AS1Q96M15 143 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 CITED2Q99967 270 aaPredicted RBP11.68□□□□□ -0.54
C9orf47-201ENST00000334490 A8MWP6 167 aa11.68□□□□□ -0.54
C9orf47-201ENST00000334490 MRPL53Q96EL3 112 aaKnown RBP11.68□□□□□ -0.54
C9orf47-201ENST00000334490 TMEM238C9JI98 176 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 GNRH2O43555 120 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 IGHV4-31P0DP07 118 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 IGLV2-14P01704 120 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 MRPL51Q4U2R6 128 aaKnown RBP11.67□□□□□ -0.54
C9orf47-201ENST00000334490 LENEPQ9Y5L5 61 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 C2orf70A6NJV1 201 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 SYS1-DBNDD2H3BUS1 97 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 CGB3P0DN86 165 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 CGB7P0DN87 165 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 PRIMA1Q86XR5 153 aa11.67□□□□□ -0.54
C9orf47-201ENST00000334490 WIPF2Q8TF74 440 aaPredicted RBP11.66□□□□□ -0.54
C9orf47-201ENST00000334490 TMEM243Q9BU79 118 aa11.66□□□□□ -0.54
C9orf47-201ENST00000334490 PATE2Q6UY27 113 aa11.66□□□□□ -0.54
C9orf47-201ENST00000334490 M0R2P5 195 aa11.66□□□□□ -0.54
C9orf47-201ENST00000334490 MYCNOSP40205 109 aa11.66□□□□□ -0.54
C9orf47-201ENST00000334490 GAGE6Q13070 117 aa11.66□□□□□ -0.54
C9orf47-201ENST00000334490 U3KQE9 123 aa11.66□□□□□ -0.54
C9orf47-201ENST00000334490 C16orf54Q6UWD8 224 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 NEGR1Q7Z3B1 354 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 C18orf32Q8TCD1 76 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 TIMM21Q9BVV7 248 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 CST9LQ9H4G1 147 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 SETD2Q9BYW2 2564 aaPredicted RBP11.65□□□□□ -0.54
C9orf47-201ENST00000334490 hDV102S1A0JD36 115 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 H3BUT2 72 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 GHRHP01286 108 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 LTAP01374 205 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 MORN5Q5VZ52 161 aa11.65□□□□□ -0.54
C9orf47-201ENST00000334490 A0A1B0GWB2 263 aa11.65□□□□□ -0.55
C9orf47-201ENST00000334490 SPCS1Q9Y6A9 102 aa11.65□□□□□ -0.55
C9orf47-201ENST00000334490 A0A0J9YY99 117 aa11.64□□□□□ -0.55
C9orf47-201ENST00000334490 TMEM89A2RUT3 159 aa11.64□□□□□ -0.55
C9orf47-201ENST00000334490 PAX2Q02962 417 aa11.64□□□□□ -0.55
C9orf47-201ENST00000334490 SLAQ13239 276 aa11.64□□□□□ -0.55
C9orf47-201ENST00000334490 GPHB5Q86YW7 130 aa11.64□□□□□ -0.55
C9orf47-201ENST00000334490 Q8N8P6 123 aa11.64□□□□□ -0.55
C9orf47-201ENST00000334490 EGR2P11161 476 aaPredicted RBP11.64□□□□□ -0.55
C9orf47-201ENST00000334490 RBAKDNA6NC62 111 aa11.64□□□□□ -0.55
C9orf47-201ENST00000334490 ODF3BA8MYP8 253 aa11.63□□□□□ -0.55
C9orf47-201ENST00000334490 K7EMT4 169 aa11.63□□□□□ -0.55
C9orf47-201ENST00000334490 PROP1O75360 226 aa11.63□□□□□ -0.55
C9orf47-201ENST00000334490 UTF1Q5T230 341 aa11.63□□□□□ -0.55
C9orf47-201ENST00000334490 MRPL36Q9P0J6 103 aaKnown RBP11.63□□□□□ -0.55
C9orf47-201ENST00000334490 MYMXA0A1B0GTQ4 84 aa11.63□□□□□ -0.55
C9orf47-201ENST00000334490 INAFM1C9JVW0 142 aa11.63□□□□□ -0.55
C9orf47-201ENST00000334490 ZNF561-AS1K7EIQ3 104 aa11.63□□□□□ -0.55
C9orf47-201ENST00000334490 C11orf71Q6IPW1 123 aa11.63□□□□□ -0.55
C9orf47-201ENST00000334490 ORAOV1Q8WV07 137 aa11.63□□□□□ -0.55
C9orf47-201ENST00000334490 SMIM27A0A1W2PRY6 76 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 SPRY2O43597 315 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 FANCD2OSQ96PS1 177 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 LINC00574Q9H8X3 128 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 CFHR4Q92496 578 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 ZNF625Q96I27 306 aaPredicted RBP11.62□□□□□ -0.55
C9orf47-201ENST00000334490 INS-IGF2F8WCM5 200 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 Q0VG73 95 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 NDUFAF3Q9BU61 184 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 HLA-DRB4P13762 266 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 CHAC1Q9BUX1 264 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 HLA-DRB4X5D2U9 266 aa11.62□□□□□ -0.55
C9orf47-201ENST00000334490 LINC01548A6NM66 108 aa11.61□□□□□ -0.55
C9orf47-201ENST00000334490 PLXNB1O43157 2135 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms