RNA–Protein interactions for RNA: ENST00000330943.8

SNX20-202, Transcript of sorting nexin 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX20, Length 2,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-202ENST00000330943 GRNP28799 593 aaKnown RBP11.12□□□□□ -0.63
SNX20-202ENST00000330943 SPANXN1Q5VSR9 72 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 OR11H1Q8NG94 326 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 OR11H2Q8NH07 326 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 CYSLTR1Q9Y271 337 aa11.12□□□□□ -0.63
SNX20-202ENST00000330943 A0A1B0GWB2 263 aa11.11□□□□□ -0.63
SNX20-202ENST00000330943 Q6ZQT7 251 aa11.11□□□□□ -0.63
SNX20-202ENST00000330943 OR11H6Q8NGC7 330 aa11.11□□□□□ -0.63
SNX20-202ENST00000330943 AGPAT4-IT1Q9H0P7 198 aa11.11□□□□□ -0.63
SNX20-202ENST00000330943 IGHV7-4-1A0A0J9YVY3 117 aa11.11□□□□□ -0.63
SNX20-202ENST00000330943 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.11□□□□□ -0.63
SNX20-202ENST00000330943 NDUFS8O00217 210 aa11.11□□□□□ -0.63
SNX20-202ENST00000330943 LY6HO94772 140 aa11.11□□□□□ -0.63
SNX20-202ENST00000330943 ZNF672Q499Z4 452 aaPredicted RBP11.11□□□□□ -0.63
SNX20-202ENST00000330943 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.11□□□□□ -0.63
SNX20-202ENST00000330943 CLUHP3Q96NS8 147 aa11.11□□□□□ -0.63
SNX20-202ENST00000330943 F8VRH5 84 aa11.1□□□□□ -0.63
SNX20-202ENST00000330943 H7C1H1 209 aa11.1□□□□□ -0.63
SNX20-202ENST00000330943 CD3EP07766 207 aa11.1□□□□□ -0.63
SNX20-202ENST00000330943 MYMXA0A1B0GTQ4 84 aa11.1□□□□□ -0.63
SNX20-202ENST00000330943 FAM208BQ5VWN6 2430 aa11.09□□□□□ -0.63
SNX20-202ENST00000330943 TMEM78Q5T7P6 136 aa11.09□□□□□ -0.63
SNX20-202ENST00000330943 LY6G5BQ8NDX9 201 aa11.09□□□□□ -0.63
SNX20-202ENST00000330943 IGHV3-49A0A0A0MS15 119 aa11.09□□□□□ -0.63
SNX20-202ENST00000330943 RBAKDNA6NC62 111 aa11.09□□□□□ -0.63
SNX20-202ENST00000330943 BUB3O43684 328 aa11.09□□□□□ -0.63
SNX20-202ENST00000330943 APOMO95445 188 aa11.09□□□□□ -0.63
SNX20-202ENST00000330943 MORN3Q6PF18 240 aaPredicted RBP11.08□□□□□ -0.63
SNX20-202ENST00000330943 SMIM2Q9BVW6 85 aa11.08□□□□□ -0.63
SNX20-202ENST00000330943 PGPEP1Q9NXJ5 209 aa11.08□□□□□ -0.63
SNX20-202ENST00000330943 H3BVH4 76 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 RAB9AP51151 201 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 SCGB2A2Q13296 93 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 LINC01560Q8TB33 94 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 SCGB3A1Q96QR1 104 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 C20orf78Q9BR46 151 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 HOXA3O43365 443 aaPredicted RBP11.08□□□□□ -0.64
SNX20-202ENST00000330943 CKS1BP61024 79 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 C15orf32Q32M92 178 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 SFTA2Q6UW10 78 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 SLC50A1Q9BRV3 221 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 ZFAND3Q9H8U3 227 aa11.08□□□□□ -0.64
SNX20-202ENST00000330943 MRPL16Q9NX20 251 aaKnown RBP11.08□□□□□ -0.64
SNX20-202ENST00000330943 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.07□□□□□ -0.64
SNX20-202ENST00000330943 TRAV12-1A0A0B4J245 112 aa11.07□□□□□ -0.64
SNX20-202ENST00000330943 FAM90A27PA6NNH2 459 aa11.07□□□□□ -0.64
SNX20-202ENST00000330943 LGALS1P09382 135 aaKnown RBP11.07□□□□□ -0.64
SNX20-202ENST00000330943 ODF3BA8MYP8 253 aa11.07□□□□□ -0.64
SNX20-202ENST00000330943 RAXQ9Y2V3 346 aa11.07□□□□□ -0.64
SNX20-202ENST00000330943 CLEC3BP05452 202 aa11.06□□□□□ -0.64
SNX20-202ENST00000330943 ECSCRQ19T08 205 aa11.06□□□□□ -0.64
SNX20-202ENST00000330943 IGHV7-81A0A0B4J1V7 117 aa11.06□□□□□ -0.64
SNX20-202ENST00000330943 SPRY2O43597 315 aa11.06□□□□□ -0.64
SNX20-202ENST00000330943 MSRB2Q9Y3D2 182 aa11.06□□□□□ -0.64
SNX20-202ENST00000330943 LINC01619G3V211 115 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 J3KRW8 73 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 CDSNQ15517 529 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 IGF2-ASQ6U949 168 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 USP9YO00507 2555 aaPredicted RBP11.05□□□□□ -0.64
SNX20-202ENST00000330943 TRAV8-2A0A0B4J237 113 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 PRADC1Q9BSG0 188 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 LINC01549A6NIU2 74 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 PRTN3P24158 256 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 FOXI1Q12951 378 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 ORMDL2Q53FV1 153 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 SCGB1D4Q6XE38 83 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 VMO1Q7Z5L0 202 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 SYT8Q8NBV8 401 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 WFDC12Q8WWY7 111 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 MRAP2Q96G30 205 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 VKORC1Q9BQB6 163 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 C1QTNF4Q9BXJ3 329 aa11.05□□□□□ -0.64
SNX20-202ENST00000330943 LOC107984156A0A0G2JMH3 177 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 ZNF815PA8K554 130 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 M0R381 172 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 NBL1P41271 181 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 ARL17AQ8IVW1 177 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 NEXN-AS1Q8NBZ9 246 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 TOMM6Q96B49 74 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 CLPSL1A2RUU4 121 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 SUMO2P61956 95 aaKnown RBP11.04□□□□□ -0.64
SNX20-202ENST00000330943 CFAP126Q5VTH2 177 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 CLEC19AQ6UXS0 136 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 Q8N6K4 173 aa11.04□□□□□ -0.64
SNX20-202ENST00000330943 DLX4Q92988 240 aaPredicted RBP11.04□□□□□ -0.64
SNX20-202ENST00000330943 RPL39LQ96EH5 51 aaKnown RBP11.04□□□□□ -0.64
SNX20-202ENST00000330943 IGHV4-4A0A075B6R2 117 aa11.03□□□□□ -0.64
SNX20-202ENST00000330943 PSMB2P49721 201 aa11.03□□□□□ -0.64
SNX20-202ENST00000330943 SMCPP49901 116 aaPredicted RBP11.03□□□□□ -0.64
SNX20-202ENST00000330943 TCTEX1D4Q5JR98 221 aa11.03□□□□□ -0.64
SNX20-202ENST00000330943 HIF1ANQ9NWT6 349 aa11.03□□□□□ -0.64
SNX20-202ENST00000330943 USP9XQ93008 2570 aaPredicted RBP11.03□□□□□ -0.64
SNX20-202ENST00000330943 M0R1W7 72 aa11.03□□□□□ -0.64
SNX20-202ENST00000330943 SRSF9Q13242 221 aaKnown RBP eCLIP11.03□□□□□ -0.64
SNX20-202ENST00000330943 PRR9Q5T870 116 aa11.03□□□□□ -0.64
SNX20-202ENST00000330943 PLEKHB2Q96CS7 222 aa11.03□□□□□ -0.64
SNX20-202ENST00000330943 TMEM238LA0A1B0GVL6 79 aa11.02□□□□□ -0.64
SNX20-202ENST00000330943 A6NJY4 79 aa11.02□□□□□ -0.64
SNX20-202ENST00000330943 ZNF418Q8TF45 676 aaPredicted RBP11.02□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms