RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 C17orf112F2Z3M2 114 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 H0YIZ8 118 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 H7BYZ3 331 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 IGKV3-20P01619 116 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 LEPP41159 167 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 DEFB1P60022 68 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 RAB5BP61020 215 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 RANP62826 216 aaKnown RBP4.49□□□□□ -1.69
SMG1-201ENST00000330588 HIST1H1AQ02539 215 aaPredicted RBP4.49□□□□□ -1.69
SMG1-201ENST00000330588 SPINK13Q1W4C9 94 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 FAM222AQ5U5X8 452 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 MORN5Q5VZ52 161 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 LYPD1Q8N2G4 141 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 TMEM263Q8WUH6 116 aaKnown RBP4.49□□□□□ -1.69
SMG1-201ENST00000330588 ASB13Q8WXK3 278 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 WFDC1Q9HC57 220 aa4.49□□□□□ -1.69
SMG1-201ENST00000330588 YTHDF2Q9Y5A9 579 aaKnown RBP4.49□□□□□ -1.69
SMG1-201ENST00000330588 IGHV3OR16-12A0A075B7B8 117 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 PLAC8L1A1L4L8 177 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 H3BQ15 152 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 M0R143 59 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 M0R2Z0 102 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 IFNA7P01567 189 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 H2BFSP57053 126 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 FXYD7P58549 80 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 DAD1P61803 113 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 LINC00336Q6ZUF6 198 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 SSX7Q7RTT5 188 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 LINC00612Q8N6U2 182 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 POM121L12Q8N7R1 296 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 OR5C1Q8NGR4 320 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 PPP1R1CQ8WVI7 109 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 LINC00477Q96M19 166 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 ATP5SQ99766 215 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 WDR61Q9GZS3 305 aaKnown RBP4.48□□□□□ -1.69
SMG1-201ENST00000330588 ZNF586Q9NXT0 402 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 HSPB11Q9Y547 144 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 TIMM8BQ9Y5J9 83 aaPredicted RBP4.48□□□□□ -1.69
SMG1-201ENST00000330588 RBAKDNA6NC62 111 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 SLC17A3O00476 420 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 RS1O15537 224 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 MPC2O95563 127 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 SLC25A5P05141 298 aaKnown RBP4.48□□□□□ -1.69
SMG1-201ENST00000330588 CRISP2P16562 243 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 RHOBP62745 196 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 LGALS9BQ3B8N2 356 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 C9orf47Q6ZRZ4 202 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 ERASQ7Z444 233 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 BAP18Q8IXM2 172 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 FAM19A4Q96LR4 140 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 C18orf15Q96N68 181 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 PYGO2Q9BRQ0 406 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 AAMDCQ9H7C9 122 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 OR5AC2Q9NZP5 309 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 LENEPQ9Y5L5 61 aa4.48□□□□□ -1.69
SMG1-201ENST00000330588 KLLNB2CW77 178 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 H3BNG1 76 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 NDUFB4O95168 129 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 RAB5CP51148 216 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 TAS2R45P59539 299 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 DAZ2Q13117 558 aaKnown RBP4.47□□□□□ -1.69
SMG1-201ENST00000330588 RPP25LQ8N5L8 163 aaKnown RBP4.47□□□□□ -1.69
SMG1-201ENST00000330588 FAM167A-AS1Q96KT0 104 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 LINC01587Q99440 93 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 SLC25A2Q9BXI2 301 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 MAP1LC3CQ9BXW4 147 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 FUT9Q9Y231 359 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 ZFP30Q9Y2G7 519 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 TIMM9Q9Y5J7 89 aa4.47□□□□□ -1.69
SMG1-201ENST00000330588 CSMD3Q7Z407 3707 aa4.46□□□□□ -1.69
SMG1-201ENST00000330588 TRAV5A0A0B4J249 113 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 ZNF705GA8MUZ8 300 aaPredicted RBP4.46□□□□□ -1.7
SMG1-201ENST00000330588 K7ERU9 68 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 SSNA1O43805 119 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 PAGE4O60829 102 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 SIX6O95475 246 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 ATP5G1P05496 136 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 RPL12P30050 165 aaKnown RBP4.46□□□□□ -1.7
SMG1-201ENST00000330588 ATP5G3P48201 142 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 ANXA2RQ3ZCQ2 193 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 LRRC37A5PQ49AS3 106 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 KHDC3LQ587J8 217 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 IBA57Q5T440 356 aaKnown RBP4.46□□□□□ -1.7
SMG1-201ENST00000330588 GFI1BQ5VTD9 330 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 DGAT2L7PQ6IED9 249 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 TEX261Q6UWH6 196 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 TMED6Q8WW62 240 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 SPANXA1Q9NS26 97 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 COX11Q9Y6N1 276 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 NBEAL2Q6ZNJ1 2754 aa4.46□□□□□ -1.7
SMG1-201ENST00000330588 TRAV12-2A0A075B6T6 113 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 C20orf202A1L168 122 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 C7orf71A4D174 169 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 PRAC2D3DTV9 90 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 CT45A10P0DMU9 189 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 EMP1P54849 157 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 RPL32P62910 135 aaKnown RBP4.45□□□□□ -1.7
SMG1-201ENST00000330588 ZNF266Q14584 549 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 CLINT1Q14677 625 aa4.45□□□□□ -1.7
SMG1-201ENST00000330588 FCN2Q15485 313 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms