RNA–Protein interactions for RNA: ENST00000322723.8

NCL-201, Transcript of nucleolin, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NCL, Length 4,034 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-201ENST00000322723 LINC01548A6NM66 108 aa9.24□□□□□ -0.93
NCL-201ENST00000322723 LEPP41159 167 aa9.24□□□□□ -0.93
NCL-201ENST00000322723 C3orf56Q8N813 242 aa9.24□□□□□ -0.93
NCL-201ENST00000322723 SVIPQ8NHG7 77 aa9.24□□□□□ -0.93
NCL-201ENST00000322723 MOB4Q9Y3A3 225 aa9.24□□□□□ -0.93
NCL-201ENST00000322723 IGHV4-61A0A0C4DH41 118 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 FXYD2P54710 66 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 ORMDL3Q8N138 153 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 DEFB104AQ8WTQ1 72 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 OR11H12B2RN74 326 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 H3BUA1 57 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 SMIM17P0DL12 118 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 CFHR3Q02985 330 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 AMN1Q8IY45 258 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 OR11H1Q8NG94 326 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 OR11H2Q8NH07 326 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 C20orf78Q9BR46 151 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 S4R3C0 116 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 LINC01546A6NGU7 62 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 FAM223BA6NKX1 122 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 GAGE2BQ13066 116 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 C15orf32Q32M92 178 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 GAGE2EQ4V326 116 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 FAM223AQ8IWN6 122 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 DKK2Q9UBU2 259 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 GAGE2DQ9UEU5 116 aa9.23□□□□□ -0.93
NCL-201ENST00000322723 A6NDX4 124 aa9.22□□□□□ -0.93
NCL-201ENST00000322723 CFAP161Q6P656 301 aa9.22□□□□□ -0.93
NCL-201ENST00000322723 BOD1L2Q8IYS8 172 aa9.22□□□□□ -0.93
NCL-201ENST00000322723 MAP1LC3AQ9H492 121 aa9.22□□□□□ -0.93
NCL-201ENST00000322723 IGLC6P0CF74 106 aa9.22□□□□□ -0.93
NCL-201ENST00000322723 C8orf49Q96NF6 230 aa9.22□□□□□ -0.93
NCL-201ENST00000322723 PIMREGQ9BSJ6 248 aa9.22□□□□□ -0.93
NCL-201ENST00000322723 M0R3E3 92 aa9.22□□□□□ -0.93
NCL-201ENST00000322723 PRR25Q96S07 402 aa9.22□□□□□ -0.93
NCL-201ENST00000322723 HERV-K104P63124 156 aa9.21□□□□□ -0.93
NCL-201ENST00000322723 ZNF747Q9BV97 191 aa9.21□□□□□ -0.93
NCL-201ENST00000322723 PGPEP1Q9NXJ5 209 aa9.21□□□□□ -0.93
NCL-201ENST00000322723 LYRM7Q5U5X0 104 aa9.21□□□□□ -0.93
NCL-201ENST00000322723 RNF183Q96D59 192 aa9.21□□□□□ -0.93
NCL-201ENST00000322723 SPAG8Q99932 426 aaPredicted RBP9.21□□□□□ -0.93
NCL-201ENST00000322723 IGHV3-35A0A0C4DH35 117 aa9.21□□□□□ -0.94
NCL-201ENST00000322723 SPG11Q96JI7 2443 aa9.21□□□□□ -0.94
NCL-201ENST00000322723 HOXA3O43365 443 aaPredicted RBP9.2□□□□□ -0.94
NCL-201ENST00000322723 IGHG2P01859 326 aa9.2□□□□□ -0.94
NCL-201ENST00000322723 IGHV3OR16-8A0A075B7F1 116 aa9.2□□□□□ -0.94
NCL-201ENST00000322723 EEF1AKMT3Q96AZ1 226 aa9.2□□□□□ -0.94
NCL-201ENST00000322723 TMEM213A2RRL7 107 aa9.2□□□□□ -0.94
NCL-201ENST00000322723 SH2D1AO60880 128 aa9.2□□□□□ -0.94
NCL-201ENST00000322723 IGHV3-23P01764 117 aa9.2□□□□□ -0.94
NCL-201ENST00000322723 GLMPQ8WWB7 406 aa9.2□□□□□ -0.94
NCL-201ENST00000322723 G3V318 75 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 CCL19Q99731 98 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 SLC50A1Q9BRV3 221 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 F8W1H4 67 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 SOCS3O14543 225 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 IGLV1-40P01703 118 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 IGKCP01834 107 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 ZNF80P51504 273 aaPredicted RBP9.19□□□□□ -0.94
NCL-201ENST00000322723 LINC01559Q495D7 138 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 TMEM238LA0A1B0GVL6 79 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 A6NJY4 79 aa9.19□□□□□ -0.94
NCL-201ENST00000322723 PRSS29PA6NIE9 313 aa9.18□□□□□ -0.94
NCL-201ENST00000322723 INSL3P51460 131 aa9.18□□□□□ -0.94
NCL-201ENST00000322723 PTH2Q96A98 100 aa9.18□□□□□ -0.94
NCL-201ENST00000322723 TRAV40A0A0B4J280 105 aa9.18□□□□□ -0.94
NCL-201ENST00000322723 IGHV4-30-2A0A087WSY4 118 aa9.18□□□□□ -0.94
NCL-201ENST00000322723 TRAV41A0A0B4J266 112 aa9.18□□□□□ -0.94
NCL-201ENST00000322723 FSHBP01225 129 aa9.18□□□□□ -0.94
NCL-201ENST00000322723 S100A4P26447 101 aaKnown RBP9.18□□□□□ -0.94
NCL-201ENST00000322723 FAM106AQ4KMX7 169 aa9.18□□□□□ -0.94
NCL-201ENST00000322723 DPM2O94777 84 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 DSCR9P59020 149 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 LYZL1Q6UWQ5 148 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 C9orf47Q6ZRZ4 202 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 GPHB5Q86YW7 130 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 FAM19A4Q96LR4 140 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 IGKV2-40A0A087WW87 121 aaPredicted RBP9.17□□□□□ -0.94
NCL-201ENST00000322723 IGKV2D-40P01614 121 aaPredicted RBP9.17□□□□□ -0.94
NCL-201ENST00000322723 GAGE5Q13069 117 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 GAGE6Q13070 117 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 PRSS2P07478 247 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 SCGB1A1P11684 91 aa9.17□□□□□ -0.94
NCL-201ENST00000322723 RPL13AP40429 203 aaKnown RBP9.17□□□□□ -0.94
NCL-201ENST00000322723 A8MWV9 139 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 IGHV4-38-2P0DP08 117 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 LINC01545Q5VT33 79 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 C8orf86Q6ZUL3 223 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 NCOR2Q9Y618 2525 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 MT-ATP8P03928 68 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 LOXL1Q08397 574 aaPredicted RBP9.16□□□□□ -0.94
NCL-201ENST00000322723 ECSCRQ19T08 205 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 APRG1Q8IVJ8 170 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 GATA3P23771 443 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 HLA-DMBP28068 263 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 SIGLEC8Q9NYZ4 499 aa9.16□□□□□ -0.94
NCL-201ENST00000322723 MSMBP08118 114 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 SPANXN1Q5VSR9 72 aa9.15□□□□□ -0.94
NCL-201ENST00000322723 CFAP46Q8IYW2 2715 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms