RNA–Protein interactions for RNA: ENST00000321805.11

UBE2D3-201, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE2D3, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-201ENST00000321805 FHL2Q14192 279 aa14.72□□□□□ -0.05
UBE2D3-201ENST00000321805 CYB561D1Q8N8Q1 229 aa14.72□□□□□ -0.05
UBE2D3-201ENST00000321805 SDF2L1Q9HCN8 221 aa14.72□□□□□ -0.05
UBE2D3-201ENST00000321805 HHLA3Q9XRX5 114 aa14.72□□□□□ -0.05
UBE2D3-201ENST00000321805 SUMO1P63165 101 aaKnown RBP14.71□□□□□ -0.05
UBE2D3-201ENST00000321805 TMEM75Q8N9X5 138 aa14.71□□□□□ -0.05
UBE2D3-201ENST00000321805 EPDR1Q9UM22 224 aa14.71□□□□□ -0.05
UBE2D3-201ENST00000321805 IGHV3-16A0A0C4DH30 117 aa14.7□□□□□ -0.06
UBE2D3-201ENST00000321805 M0R2P5 195 aa14.7□□□□□ -0.06
UBE2D3-201ENST00000321805 MRPL23Q16540 153 aaKnown RBP14.7□□□□□ -0.06
UBE2D3-201ENST00000321805 ZFP69Q49AA0 526 aa14.7□□□□□ -0.06
UBE2D3-201ENST00000321805 PSG8Q9UQ74 426 aa14.7□□□□□ -0.06
UBE2D3-201ENST00000321805 TRAV4A0A0B4J268 109 aa14.69□□□□□ -0.06
UBE2D3-201ENST00000321805 TRGV4A0A0C4DH28 118 aa14.69□□□□□ -0.06
UBE2D3-201ENST00000321805 ARPC5O15511 151 aa14.69□□□□□ -0.06
UBE2D3-201ENST00000321805 TYMSP04818 313 aa14.69□□□□□ -0.06
UBE2D3-201ENST00000321805 FLI1Q01543 452 aaPredicted RBP14.69□□□□□ -0.06
UBE2D3-201ENST00000321805 ZNF726P1Q15940 193 aa14.69□□□□□ -0.06
UBE2D3-201ENST00000321805 AKR1C8PQ5T2L2 129 aa14.69□□□□□ -0.06
UBE2D3-201ENST00000321805 NKX6-2Q9C056 277 aaPredicted RBP14.69□□□□□ -0.06
UBE2D3-201ENST00000321805 IGLV2-11P01706 119 aa14.68□□□□□ -0.06
UBE2D3-201ENST00000321805 SAPCD1Q5SSQ6 148 aa14.68□□□□□ -0.06
UBE2D3-201ENST00000321805 C8orf49Q96NF6 230 aa14.68□□□□□ -0.06
UBE2D3-201ENST00000321805 GNRH2O43555 120 aa14.67□□□□□ -0.06
UBE2D3-201ENST00000321805 ORM1P02763 201 aa14.67□□□□□ -0.06
UBE2D3-201ENST00000321805 PFN1P07737 140 aaKnown RBP14.67□□□□□ -0.06
UBE2D3-201ENST00000321805 MED14OSP0DP75 135 aa14.67□□□□□ -0.06
UBE2D3-201ENST00000321805 SMUG1Q53HV7 270 aa14.67□□□□□ -0.06
UBE2D3-201ENST00000321805 ZNF479Q96JC4 524 aa14.67□□□□□ -0.06
UBE2D3-201ENST00000321805 SGK494Q96LW2 274 aa14.67□□□□□ -0.06
UBE2D3-201ENST00000321805 GCGP01275 180 aa14.66□□□□□ -0.06
UBE2D3-201ENST00000321805 ZNF345Q14585 488 aa14.66□□□□□ -0.06
UBE2D3-201ENST00000321805 NEGR1Q7Z3B1 354 aa14.66□□□□□ -0.06
UBE2D3-201ENST00000321805 CYTL1Q9NRR1 136 aa14.66□□□□□ -0.06
UBE2D3-201ENST00000321805 SFTA3P0C7M3 94 aa14.65□□□□□ -0.06
UBE2D3-201ENST00000321805 PPT1P50897 306 aa14.65□□□□□ -0.06
UBE2D3-201ENST00000321805 TNP2Q05952 138 aa14.65□□□□□ -0.06
UBE2D3-201ENST00000321805 OR4C5Q8NGB2 326 aa14.65□□□□□ -0.06
UBE2D3-201ENST00000321805 PCNPQ8WW12 178 aaKnown RBP14.65□□□□□ -0.06
UBE2D3-201ENST00000321805 KRTAP1-5Q9BYS1 174 aa14.65□□□□□ -0.06
UBE2D3-201ENST00000321805 SIVA1O15304 175 aa14.64□□□□□ -0.07
UBE2D3-201ENST00000321805 SRIP30626 198 aa14.64□□□□□ -0.07
UBE2D3-201ENST00000321805 ZNF80P51504 273 aaPredicted RBP14.64□□□□□ -0.07
UBE2D3-201ENST00000321805 PRNTQ86SH4 94 aa14.64□□□□□ -0.07
UBE2D3-201ENST00000321805 HIST1H2BAQ96A08 127 aa14.64□□□□□ -0.07
UBE2D3-201ENST00000321805 C9JCJ5 164 aa14.63□□□□□ -0.07
UBE2D3-201ENST00000321805 K7EQD1 137 aa14.63□□□□□ -0.07
UBE2D3-201ENST00000321805 CIDEAO60543 219 aa14.63□□□□□ -0.07
UBE2D3-201ENST00000321805 IFNA7P01567 189 aa14.63□□□□□ -0.07
UBE2D3-201ENST00000321805 MAP1LC3B2A6NCE7 125 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 FAM74A7A6NL05 159 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 NXPH4O95158 308 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 LYPD5Q6UWN5 251 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 KCNRGQ8N5I3 272 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 PTH2Q96A98 100 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 TXNDC17Q9BRA2 123 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 TCEAL7Q9BRU2 100 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 MAP1LC3BQ9GZQ8 125 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 C11orf21Q9P2W6 132 aa14.62□□□□□ -0.07
UBE2D3-201ENST00000321805 HMSDA8MTL9 139 aa14.61□□□□□ -0.07
UBE2D3-201ENST00000321805 PEX7O00628 323 aa14.61□□□□□ -0.07
UBE2D3-201ENST00000321805 GYPEP15421 78 aa14.61□□□□□ -0.07
UBE2D3-201ENST00000321805 UBE2G2P60604 165 aa14.61□□□□□ -0.07
UBE2D3-201ENST00000321805 SH2D6Q7Z4S9 175 aa14.61□□□□□ -0.07
UBE2D3-201ENST00000321805 STOML3Q8TAV4 291 aa14.61□□□□□ -0.07
UBE2D3-201ENST00000321805 C9orf85Q96MD7 179 aa14.61□□□□□ -0.07
UBE2D3-201ENST00000321805 ARL2-SNX15V9GYD0 113 aa14.61□□□□□ -0.07
UBE2D3-201ENST00000321805 FGF8P55075 233 aaPredicted RBP14.6□□□□□ -0.07
UBE2D3-201ENST00000321805 K7EP13 123 aa14.59□□□□□ -0.07
UBE2D3-201ENST00000321805 FHITP49789 147 aa14.59□□□□□ -0.07
UBE2D3-201ENST00000321805 ZNF876PQ49A33 203 aa14.59□□□□□ -0.07
UBE2D3-201ENST00000321805 Q86TA4 180 aa14.59□□□□□ -0.07
UBE2D3-201ENST00000321805 A0A0D9SG52 128 aa14.58□□□□□ -0.08
UBE2D3-201ENST00000321805 UMAD1C9J7I0 102 aa14.58□□□□□ -0.08
UBE2D3-201ENST00000321805 SMLR1H3BR10 107 aa14.58□□□□□ -0.08
UBE2D3-201ENST00000321805 SEC11BP0C7V7 166 aa14.58□□□□□ -0.08
UBE2D3-201ENST00000321805 GATA1P15976 413 aaPredicted RBP14.58□□□□□ -0.08
UBE2D3-201ENST00000321805 LINC00479Q96M42 142 aa14.58□□□□□ -0.08
UBE2D3-201ENST00000321805 TRAV34A0A0B4J273 112 aa14.57□□□□□ -0.08
UBE2D3-201ENST00000321805 FABP5P3A8MUU1 101 aa14.57□□□□□ -0.08
UBE2D3-201ENST00000321805 PIK3CD-AS1Q5SR53 167 aa14.57□□□□□ -0.08
UBE2D3-201ENST00000321805 COX8CQ7Z4L0 72 aa14.57□□□□□ -0.08
UBE2D3-201ENST00000321805 ZNF575Q86XF7 245 aa14.57□□□□□ -0.08
UBE2D3-201ENST00000321805 FMC1Q96HJ9 113 aa14.57□□□□□ -0.08
UBE2D3-201ENST00000321805 ZFP30Q9Y2G7 519 aa14.57□□□□□ -0.08
UBE2D3-201ENST00000321805 KANTRA0A1W2PQU2 76 aa14.56□□□□□ -0.08
UBE2D3-201ENST00000321805 RS1O15537 224 aa14.56□□□□□ -0.08
UBE2D3-201ENST00000321805 RNASE3P12724 160 aaKnown RBP14.56□□□□□ -0.08
UBE2D3-201ENST00000321805 TIRAPP58753 221 aa14.56□□□□□ -0.08
UBE2D3-201ENST00000321805 LINC00315P59091 139 aa14.56□□□□□ -0.08
UBE2D3-201ENST00000321805 TRAV9-2A0A087WT02 112 aa14.55□□□□□ -0.08
UBE2D3-201ENST00000321805 TRBV6-1A0A0K0K1D8 114 aa14.55□□□□□ -0.08
UBE2D3-201ENST00000321805 TRBV6-4A0A1B0GX49 114 aa14.55□□□□□ -0.08
UBE2D3-201ENST00000321805 EIF5AP63241 154 aaKnown RBP14.55□□□□□ -0.08
UBE2D3-201ENST00000321805 CFAP126Q5VTH2 177 aa14.55□□□□□ -0.08
UBE2D3-201ENST00000321805 OR11H4Q8NGC9 324 aa14.55□□□□□ -0.08
UBE2D3-201ENST00000321805 LY96Q9Y6Y9 160 aa14.55□□□□□ -0.08
UBE2D3-201ENST00000321805 RYR1P21817 5038 aa14.55□□□□□ -0.08
UBE2D3-201ENST00000321805 IGKV3D-20A0A0C4DH25 116 aa14.54□□□□□ -0.08
UBE2D3-201ENST00000321805 C16orf90A8MZG2 172 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms