RNA–Protein interactions for RNA: ENST00000312547.6

CHMP2A-201, Transcript of charged multivesicular body protein 2A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2A, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-201ENST00000312547 OR5I1Q13606 314 aa9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 TMEM241Q24JQ0 296 aa9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 LINC01559Q495D7 138 aa9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 PRR27Q6MZM9 219 aa9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 FAM159AQ6UWV7 190 aa9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 C11orf72Q8NBR9 251 aa9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 TMEM263Q8WUH6 116 aaKnown RBP9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 C11orf68Q9H3H3 251 aaKnown RBP9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 BIN3Q9NQY0 253 aa9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 NAGKQ9UJ70 344 aa9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 TP53TG3Q9ULZ0 132 aa9.09□□□□□ -0.95
CHMP2A-201ENST00000312547 KRBOX1C9JBD0 128 aa9.08□□□□□ -0.96
CHMP2A-201ENST00000312547 HTN1P15515 57 aa9.08□□□□□ -0.96
CHMP2A-201ENST00000312547 C16orf74Q96GX8 76 aa9.08□□□□□ -0.96
CHMP2A-201ENST00000312547 KCNS1Q96KK3 526 aa9.08□□□□□ -0.96
CHMP2A-201ENST00000312547 SDF2L1Q9HCN8 221 aa9.08□□□□□ -0.96
CHMP2A-201ENST00000312547 NAT8Q9UHE5 227 aa9.08□□□□□ -0.96
CHMP2A-201ENST00000312547 U3KQK5 164 aa9.08□□□□□ -0.96
CHMP2A-201ENST00000312547 TRGV11A0A075B6L2 103 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 IGHV3-16A0A0C4DH30 117 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 TMEM189A5PLL7 270 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 CBY3A6NI87 242 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 GNRH2O43555 120 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 ORM1P02763 201 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 TYMSP04818 313 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 ADCYAP1P18509 176 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 RPL23P62829 140 aaKnown RBP9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 DNLZQ5SXM8 178 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 IBA57Q5T440 356 aaKnown RBP9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 FAM231DQ6ZW35 169 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 IL17DQ8TAD2 202 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 MDFICQ9P1T7 246 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 STAB2Q8WWQ8 2551 aa9.07□□□□□ -0.96
CHMP2A-201ENST00000312547 A0A0J9YWU9 116 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 B4DEV8 164 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 M0R036 132 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 DEFB4AO15263 64 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 TCL1AP56279 114 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 NUDT10Q8NFP7 164 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 ISOC2Q96AB3 205 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 NUDT11Q96G61 164 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 EDA2RQ9HAV5 297 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 GSN-AS1Q9NRJ2 163 aa9.06□□□□□ -0.96
CHMP2A-201ENST00000312547 CXCL1P09341 107 aa9.05□□□□□ -0.96
CHMP2A-201ENST00000312547 RPL19P84098 196 aaKnown RBP9.05□□□□□ -0.96
CHMP2A-201ENST00000312547 DAZ2Q13117 558 aaKnown RBP9.05□□□□□ -0.96
CHMP2A-201ENST00000312547 DAZAP1Q96EP5 407 aaKnown RBP9.05□□□□□ -0.96
CHMP2A-201ENST00000312547 RNASE7Q9H1E1 156 aaKnown RBP9.05□□□□□ -0.96
CHMP2A-201ENST00000312547 TMSB15BA0A087X1C1 80 aa9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 P01737 135 aa9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 RNASE3P12724 160 aaKnown RBP9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 ZNF415Q09FC8 603 aa9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 ADIRFQ15847 76 aa9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 C10orf91Q5T1B1 145 aa9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 C9orf85Q96MD7 179 aa9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 SEC11CQ9BY50 192 aa9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 OSTCQ9NRP0 149 aa9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 DKK2Q9UBU2 259 aa9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 TIMM8BQ9Y5J9 83 aaPredicted RBP9.04□□□□□ -0.96
CHMP2A-201ENST00000312547 GRIFINA4D1Z8 144 aa9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 LYRM9A8MSI8 78 aa9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 F8W036 122 aa9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 ASIPP42127 132 aa9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 EMP1P54849 157 aa9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 ERVFC1-1P60608 527 aa9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 RPS20P60866 119 aaKnown RBP9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 PNRC1Q12796 327 aaPredicted RBP9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 LINC00612Q8N6U2 182 aa9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 OR2D3Q8NGH3 330 aa9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 RPP21Q9H633 154 aaKnown RBP9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 CELA1Q9UNI1 258 aa9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 CARHSP1Q9Y2V2 147 aaKnown RBP9.03□□□□□ -0.96
CHMP2A-201ENST00000312547 SNURFLB1AK76 121 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 GATCO43716 136 aaKnown RBP9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 SPINK4O60575 86 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 SPART-AS1P0CW21 52 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 MED14OSP0DP75 135 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 NDUFA5Q16718 116 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 CT83Q5H943 113 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 FAM222AQ5U5X8 452 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 SLC7A5P1Q8MH63 180 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 SFRP2Q96HF1 295 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 SPXQ9BT56 116 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 SSBP4Q9BWG4 385 aaPredicted RBP9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 NOP10Q9NPE3 64 aaKnown RBP9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 SCRT2Q9NQ03 307 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 IL36BQ9NZH7 164 aa9.02□□□□□ -0.97
CHMP2A-201ENST00000312547 TEX48A0A1B0GUV7 120 aa9.01□□□□□ -0.97
CHMP2A-201ENST00000312547 ARMS2P0C7Q2 107 aa9.01□□□□□ -0.97
CHMP2A-201ENST00000312547 IGLC6P0CF74 106 aa9.01□□□□□ -0.97
CHMP2A-201ENST00000312547 LGALS9BQ3B8N2 356 aa9.01□□□□□ -0.97
CHMP2A-201ENST00000312547 PTH2Q96A98 100 aa9.01□□□□□ -0.97
CHMP2A-201ENST00000312547 V9GYV3 84 aa9.01□□□□□ -0.97
CHMP2A-201ENST00000312547 DYNC2H1Q8NCM8 4307 aaKnown RBP9.01□□□□□ -0.97
CHMP2A-201ENST00000312547 XKRY2A2RUG3 117 aa9□□□□□ -0.97
CHMP2A-201ENST00000312547 H3BVH4 76 aa9□□□□□ -0.97
CHMP2A-201ENST00000312547 SNAI2O43623 268 aa9□□□□□ -0.97
CHMP2A-201ENST00000312547 OR5AL1P0C617 328 aa9□□□□□ -0.97
CHMP2A-201ENST00000312547 GZMBP10144 247 aa9□□□□□ -0.97
CHMP2A-201ENST00000312547 S100A4P26447 101 aaKnown RBP9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms