RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 ZNRF2Q8NHG8 242 aa12.4□□□□□ -0.42
HCFC1-201ENST00000310441 DAZ3Q9NR90 486 aaKnown RBP12.4□□□□□ -0.42
HCFC1-201ENST00000310441 BAALC-AS2P0C853 105 aa12.4□□□□□ -0.43
HCFC1-201ENST00000310441 H3BRN7 92 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 WIPF2Q8TF74 440 aaPredicted RBP12.39□□□□□ -0.43
HCFC1-201ENST00000310441 H3BMG7 143 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 A0A1B0GX51 115 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 ATP6V0E1O15342 81 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 PTPRBP23467 1997 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 PRSS57Q6UWY2 283 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 LMO1P25800 156 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 MRPL35Q9NZE8 188 aaKnown RBP12.39□□□□□ -0.43
HCFC1-201ENST00000310441 PDE6GP18545 87 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 MESP1Q9BRJ9 268 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 V9GYV3 84 aa12.39□□□□□ -0.43
HCFC1-201ENST00000310441 IGHV1-69DA0A0B4J2H0 117 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 IGHV1-69P01742 117 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 C15orf53Q8NAA6 179 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 TMEM213A2RRL7 107 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 TFF1P04155 84 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 IGHV2-70DA0A0C4DH43 119 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 LINC00311Q8N616 119 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 WFDC9Q8NEX5 89 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 MRPL36Q9P0J6 103 aaKnown RBP12.38□□□□□ -0.43
HCFC1-201ENST00000310441 EXPH5Q8NEV8 1989 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 CRYGCP07315 174 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 BPESC1Q9GZL8 116 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 CLPSL1A2RUU4 121 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 ETDCA0A1B0GVM5 59 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 MDS2Q8NDY4 140 aa12.38□□□□□ -0.43
HCFC1-201ENST00000310441 IGHV2-70P01814 119 aa12.37□□□□□ -0.43
HCFC1-201ENST00000310441 LTBP1Q14766 1721 aa12.37□□□□□ -0.43
HCFC1-201ENST00000310441 LY6DQ14210 128 aa12.37□□□□□ -0.43
HCFC1-201ENST00000310441 EFNA2O43921 213 aa12.37□□□□□ -0.43
HCFC1-201ENST00000310441 C8orf31Q8N9H6 132 aa12.37□□□□□ -0.43
HCFC1-201ENST00000310441 KLK9Q9UKQ9 250 aa12.36□□□□□ -0.43
HCFC1-201ENST00000310441 ANXA2RQ3ZCQ2 193 aa12.36□□□□□ -0.43
HCFC1-201ENST00000310441 KLF2Q9Y5W3 355 aaPredicted RBP12.36□□□□□ -0.43
HCFC1-201ENST00000310441 TINCRA0A1B0GVN0 87 aa12.36□□□□□ -0.43
HCFC1-201ENST00000310441 C10orf91Q5T1B1 145 aa12.36□□□□□ -0.43
HCFC1-201ENST00000310441 VSIG2Q96IQ7 327 aa12.36□□□□□ -0.43
HCFC1-201ENST00000310441 OPRPNQ99935 248 aaPredicted RBP12.36□□□□□ -0.43
HCFC1-201ENST00000310441 PINLYPA6NC86 204 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 C4orf48Q5BLP8 95 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 JMJD7-PLA2G4BH0Y9G9 81 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 CFC1BP0CG36 223 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 CFC1P0CG37 223 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 LINC00479Q96M42 142 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 IGHV7-4-1A0A0J9YVY3 117 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 LINC01620Q4KN68 170 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 IGF2BP2-AS1Q96M15 143 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 BDP1A6H8Y1 2624 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 A0A0B4J2C4 111 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 K7EM74 188 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 PROP1O75360 226 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 C12orf74Q32Q52 190 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 IGHV3-16A0A0C4DH30 117 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 NXPH4O95158 308 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 Q6ZWC4 215 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 DEFB104AQ8WTQ1 72 aa12.35□□□□□ -0.43
HCFC1-201ENST00000310441 PRDM6Q9NQX0 595 aa12.34□□□□□ -0.43
HCFC1-201ENST00000310441 SELENOKQ9Y6D0 94 aa12.34□□□□□ -0.43
HCFC1-201ENST00000310441 CFHR3Q02985 330 aa12.34□□□□□ -0.43
HCFC1-201ENST00000310441 LTAP01374 205 aa12.34□□□□□ -0.43
HCFC1-201ENST00000310441 FOXL2NBQ6ZUU3 175 aa12.34□□□□□ -0.43
HCFC1-201ENST00000310441 MRPL55Q7Z7F7 128 aaKnown RBP12.34□□□□□ -0.43
HCFC1-201ENST00000310441 ZNF503Q96F45 646 aa12.34□□□□□ -0.43
HCFC1-201ENST00000310441 CXCL5P42830 114 aa12.34□□□□□ -0.43
HCFC1-201ENST00000310441 BUB3O43684 328 aa12.34□□□□□ -0.43
HCFC1-201ENST00000310441 ELANEP08246 267 aa12.33□□□□□ -0.44
HCFC1-201ENST00000310441 A0A087WV48 116 aa12.33□□□□□ -0.44
HCFC1-201ENST00000310441 VOPP1Q96AW1 172 aa12.33□□□□□ -0.44
HCFC1-201ENST00000310441 ZC2HC1AQ96GY0 325 aa12.33□□□□□ -0.44
HCFC1-201ENST00000310441 SS18L2Q9UHA2 77 aa12.33□□□□□ -0.44
HCFC1-201ENST00000310441 XCL1P47992 114 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 C11orf52Q96A22 123 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 Q9H8V8 135 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 NDUFS7O75251 213 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 PSMB8P28062 276 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 IGLL1P15814 213 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 MST1P26927 711 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 TIRAPP58753 221 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 NREPQ16612 68 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 IGKV2D-24A0A075B6R9 120 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 HIGD2BQ4VC39 106 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 C16orf74Q96GX8 76 aa12.32□□□□□ -0.44
HCFC1-201ENST00000310441 B5MCH6 92 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 ADCYAP1P18509 176 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 RPL18AQ02543 176 aaKnown RBP12.31□□□□□ -0.44
HCFC1-201ENST00000310441 BAALCQ8WXS3 180 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 CYYR1Q96J86 154 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 TRAV26-2A0A0B4J265 109 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 ZFP2Q6ZN57 461 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 K7ERJ3 54 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 ICOSQ9Y6W8 199 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 MYO9AB2RTY4 2548 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 TMEM256-PLSCR3K7ERE1 68 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 TEX36Q5VZQ5 186 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 IGFL4Q6B9Z1 124 aa12.31□□□□□ -0.44
HCFC1-201ENST00000310441 Q6ZS92 163 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms