RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 PLAC8L1A1L4L8 177 aa12.82□□□□□ -0.36
SSSCA1-201ENST00000309328 RAB19A4D1S5 217 aa12.82□□□□□ -0.36
SSSCA1-201ENST00000309328 C3orf84H3BNL1 204 aa12.82□□□□□ -0.36
SSSCA1-201ENST00000309328 LGALS9BQ3B8N2 356 aa12.82□□□□□ -0.36
SSSCA1-201ENST00000309328 FAM74A3Q4VXF1 159 aa12.82□□□□□ -0.36
SSSCA1-201ENST00000309328 FAM222AQ5U5X8 452 aa12.82□□□□□ -0.36
SSSCA1-201ENST00000309328 PARLQ9H300 379 aa12.82□□□□□ -0.36
SSSCA1-201ENST00000309328 LY96Q9Y6Y9 160 aa12.82□□□□□ -0.36
SSSCA1-201ENST00000309328 SH2D1AO60880 128 aa12.81□□□□□ -0.36
SSSCA1-201ENST00000309328 LINC01559Q495D7 138 aa12.81□□□□□ -0.36
SSSCA1-201ENST00000309328 C11orf72Q8NBR9 251 aa12.81□□□□□ -0.36
SSSCA1-201ENST00000309328 ORM1P02763 201 aa12.8□□□□□ -0.36
SSSCA1-201ENST00000309328 SRP19P09132 144 aaKnown RBP12.8□□□□□ -0.36
SSSCA1-201ENST00000309328 NHLRC2Q8NBF2 726 aa12.8□□□□□ -0.36
SSSCA1-201ENST00000309328 DAZAP1Q96EP5 407 aaKnown RBP12.8□□□□□ -0.36
SSSCA1-201ENST00000309328 SMIM7Q9BQ49 75 aa12.8□□□□□ -0.36
SSSCA1-201ENST00000309328 NOP10Q9NPE3 64 aaKnown RBP12.8□□□□□ -0.36
SSSCA1-201ENST00000309328 B4DEV8 164 aa12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 PRM2P04554 102 aa12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 TYMSP04818 313 aa12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 CXCL1P09341 107 aa12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 MGST1P10620 155 aaKnown RBP12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 CRIP1P50238 77 aa12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 DAD1P61803 113 aa12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 Q6ZQT7 251 aa12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 NDUFAF3Q9BU61 184 aa12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 GSN-AS1Q9NRJ2 163 aa12.79□□□□□ -0.36
SSSCA1-201ENST00000309328 TRBV20OR9-2A0A075B6H5 130 aa12.78□□□□□ -0.36
SSSCA1-201ENST00000309328 IGHV3-16A0A0C4DH30 117 aa12.78□□□□□ -0.36
SSSCA1-201ENST00000309328 NUPR2A6NF83 97 aa12.78□□□□□ -0.36
SSSCA1-201ENST00000309328 CEBPGP53567 150 aa12.78□□□□□ -0.36
SSSCA1-201ENST00000309328 DNLZQ5SXM8 178 aa12.78□□□□□ -0.36
SSSCA1-201ENST00000309328 C18orf15Q96N68 181 aa12.78□□□□□ -0.36
SSSCA1-201ENST00000309328 CELA1Q9UNI1 258 aa12.78□□□□□ -0.36
SSSCA1-201ENST00000309328 DNAH7Q8WXX0 4024 aa12.77□□□□□ -0.36
SSSCA1-201ENST00000309328 TRAV10A0A0B4J240 114 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 XKRY2A2RUG3 117 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 ZNF727A8MUV8 499 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 KRBOX1C9JBD0 128 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 IGLV2-8P01709 118 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 S100A4P26447 101 aaKnown RBP12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 ASIPP42127 132 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 NANOS2P60321 138 aaKnown RBP12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 C12orf74Q32Q52 190 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 PRR27Q6MZM9 219 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 LINC00612Q8N6U2 182 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 C11orf21Q9P2W6 132 aa12.77□□□□□ -0.37
SSSCA1-201ENST00000309328 IGKV3D-20A0A0C4DH25 116 aa12.76□□□□□ -0.37
SSSCA1-201ENST00000309328 M0R2P5 195 aa12.76□□□□□ -0.37
SSSCA1-201ENST00000309328 SPINK4O60575 86 aa12.76□□□□□ -0.37
SSSCA1-201ENST00000309328 RPS20P60866 119 aaKnown RBP12.76□□□□□ -0.37
SSSCA1-201ENST00000309328 OR5I1Q13606 314 aa12.76□□□□□ -0.37
SSSCA1-201ENST00000309328 SOHLH1Q5JUK2 328 aa12.76□□□□□ -0.37
SSSCA1-201ENST00000309328 PIK3CD-AS1Q5SR53 167 aa12.76□□□□□ -0.37
SSSCA1-201ENST00000309328 UQCC3Q6UW78 93 aa12.76□□□□□ -0.37
SSSCA1-201ENST00000309328 PTH2Q96A98 100 aa12.76□□□□□ -0.37
SSSCA1-201ENST00000309328 GNRH2O43555 120 aa12.75□□□□□ -0.37
SSSCA1-201ENST00000309328 P01737 135 aa12.75□□□□□ -0.37
SSSCA1-201ENST00000309328 PHLDA1Q8WV24 401 aaPredicted RBP12.75□□□□□ -0.37
SSSCA1-201ENST00000309328 RASL10AQ92737 203 aa12.75□□□□□ -0.37
SSSCA1-201ENST00000309328 IL36BQ9NZH7 164 aa12.75□□□□□ -0.37
SSSCA1-201ENST00000309328 MDFICQ9P1T7 246 aa12.75□□□□□ -0.37
SSSCA1-201ENST00000309328 KLK5Q9Y337 293 aaPredicted RBP12.75□□□□□ -0.37
SSSCA1-201ENST00000309328 TRGV1A0A0A0MS02 117 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 M0R036 132 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 ATP5G1P05496 136 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 DEFB130BP0DP73 79 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 DEFB130AP0DP74 79 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 MED14OSP0DP75 135 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 Q6ZTC4 211 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 OCC1Q8TAD7 63 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 FAM210BQ96KR6 192 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 C9orf85Q96MD7 179 aa12.74□□□□□ -0.37
SSSCA1-201ENST00000309328 TRGV2A0A075B6R0 118 aa12.73□□□□□ -0.37
SSSCA1-201ENST00000309328 C19orf71A6NCJ1 209 aa12.73□□□□□ -0.37
SSSCA1-201ENST00000309328 TCTAP57738 103 aa12.73□□□□□ -0.37
SSSCA1-201ENST00000309328 TMEM241Q24JQ0 296 aa12.73□□□□□ -0.37
SSSCA1-201ENST00000309328 CEMP1Q6PRD7 247 aaPredicted RBP12.73□□□□□ -0.37
SSSCA1-201ENST00000309328 SRSF3P84103 164 aaKnown RBP12.72□□□□□ -0.37
SSSCA1-201ENST00000309328 FAM231DQ6ZW35 169 aa12.72□□□□□ -0.37
SSSCA1-201ENST00000309328 LINC01551Q86U37 167 aa12.72□□□□□ -0.37
SSSCA1-201ENST00000309328 NAT8Q9UHE5 227 aa12.72□□□□□ -0.37
SSSCA1-201ENST00000309328 DEFB131BA0A096LNP1 70 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 GAGE12BA1L429 117 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 PGPEP1LA6NFU8 196 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 CIDEAO60543 219 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 GAGE7O76087 117 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 GAGE12FP0CL80 117 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 GAGE12GP0CL81 117 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 GAGE12IP0CL82 117 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 RNASE3P12724 160 aaKnown RBP12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 Q6ZTI0 123 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 SYT8Q8NBV8 401 aa12.71□□□□□ -0.37
SSSCA1-201ENST00000309328 C9JQL5 133 aa12.7□□□□□ -0.38
SSSCA1-201ENST00000309328 CASC10Q5T4H9 136 aa12.7□□□□□ -0.38
SSSCA1-201ENST00000309328 OR2D3Q8NGH3 330 aa12.7□□□□□ -0.38
SSSCA1-201ENST00000309328 PHLDA3Q9Y5J5 127 aa12.7□□□□□ -0.38
SSSCA1-201ENST00000309328 K7EN84 100 aa12.69□□□□□ -0.38
SSSCA1-201ENST00000309328 OR5AL1P0C617 328 aa12.69□□□□□ -0.38
SSSCA1-201ENST00000309328 SFTA3P0C7M3 94 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms